RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 COL6A5A8TX70 2615 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 RPS29P62273 56 aaKnown RBP1□□□□□ -2.25
TNRC6A-218ENST00000569634 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
TNRC6A-218ENST00000569634 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
TNRC6A-218ENST00000569634 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
TNRC6A-218ENST00000569634 POLQO75417 2590 aa0.99□□□□□ -2.25
TNRC6A-218ENST00000569634 CCDC168Q8NDH2 2452 aa0.98□□□□□ -2.25
TNRC6A-218ENST00000569634 FAM186AA6NE01 2351 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 EPG5Q9HCE0 2579 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 A0A096LNI7 61 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 NCOR2Q9Y618 2525 aa0.97□□□□□ -2.25
TNRC6A-218ENST00000569634 TENM4Q6N022 2769 aa0.96□□□□□ -2.25
TNRC6A-218ENST00000569634 CHD6Q8TD26 2715 aa0.96□□□□□ -2.26
TNRC6A-218ENST00000569634 AKAP13Q12802 2813 aa0.96□□□□□ -2.26
TNRC6A-218ENST00000569634 TNRC18O15417 2968 aaPredicted RBP0.95□□□□□ -2.26
TNRC6A-218ENST00000569634 CHD9Q3L8U1 2897 aa0.94□□□□□ -2.26
TNRC6A-218ENST00000569634 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
TNRC6A-218ENST00000569634 A0A096LPF7 62 aa0.94□□□□□ -2.26
TNRC6A-218ENST00000569634 ATRQ13535 2644 aa0.94□□□□□ -2.26
TNRC6A-218ENST00000569634 LRRK2Q5S007 2527 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 BDP1A6H8Y1 2624 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 USP24Q9UPU5 2620 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 PTPN13Q12923 2485 aa0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 RIF1Q5UIP0 2472 aaKnown RBP0.93□□□□□ -2.26
TNRC6A-218ENST00000569634 CELSR1Q9NYQ6 3014 aa0.92□□□□□ -2.26
TNRC6A-218ENST00000569634 HIVEP3Q5T1R4 2406 aa0.92□□□□□ -2.26
TNRC6A-218ENST00000569634 DEFB133Q30KQ1 61 aa0.92□□□□□ -2.26
TNRC6A-218ENST00000569634 SMR3AQ99954 134 aa0.92□□□□□ -2.26
TNRC6A-218ENST00000569634 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
TNRC6A-218ENST00000569634 ANKHD1Q8IWZ3 2542 aaKnown RBP0.9□□□□□ -2.26
TNRC6A-218ENST00000569634 APCP25054 2843 aa0.9□□□□□ -2.26
TNRC6A-218ENST00000569634 HELZ2Q9BYK8 2649 aaKnown RBP0.9□□□□□ -2.27
TNRC6A-218ENST00000569634 CD52P31358 61 aa0.89□□□□□ -2.27
TNRC6A-218ENST00000569634 FRYLO94915 3013 aa0.89□□□□□ -2.27
TNRC6A-218ENST00000569634 CACNA1AO00555 2505 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 MTORP42345 2549 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 U3KQA8 63 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 PIEZO1Q92508 2521 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 ACANP16112 2415 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
TNRC6A-218ENST00000569634 CSMD3Q7Z407 3707 aa0.87□□□□□ -2.27
TNRC6A-218ENST00000569634 FLNCQ14315 2725 aa0.87□□□□□ -2.27
TNRC6A-218ENST00000569634 ITPR1Q14643 2758 aa0.86□□□□□ -2.27
TNRC6A-218ENST00000569634 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
TNRC6A-218ENST00000569634 NSD1Q96L73 2696 aaPredicted RBP0.86□□□□□ -2.27
TNRC6A-218ENST00000569634 CEP350Q5VT06 3117 aa0.86□□□□□ -2.27
TNRC6A-218ENST00000569634 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
TNRC6A-218ENST00000569634 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
TNRC6A-218ENST00000569634 MAP1AP78559 2803 aaPredicted RBP0.85□□□□□ -2.27
TNRC6A-218ENST00000569634 VPS13DQ5THJ4 4388 aa0.85□□□□□ -2.27
TNRC6A-218ENST00000569634 COL12A1Q99715 3063 aa0.84□□□□□ -2.28
TNRC6A-218ENST00000569634 NF1P21359 2839 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 NBEAQ8NFP9 2946 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 COL6A3P12111 3177 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
TNRC6A-218ENST00000569634 NIPBLQ6KC79 2804 aaeCLIP0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 CFAP54Q96N23 3096 aa0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 GCN1Q92616 2671 aaKnown RBP0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 TRIOO75962 3097 aa0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 LRBAP50851 2863 aa0.82□□□□□ -2.28
TNRC6A-218ENST00000569634 COL7A1Q02388 2944 aa0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 CFAP46Q8IYW2 2715 aa0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 AKAP9Q99996 3911 aa0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 TNXBP22105 4242 aa0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 NBPF19A0A087WUL8 3843 aa0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 RANBP2P49792 3224 aaKnown RBP0.81□□□□□ -2.28
TNRC6A-218ENST00000569634 PRUNE2Q8WUY3 3088 aa0.8□□□□□ -2.28
TNRC6A-218ENST00000569634 STAB1Q9NY15 2570 aa0.8□□□□□ -2.28
TNRC6A-218ENST00000569634 PDZD2O15018 2839 aa0.8□□□□□ -2.28
TNRC6A-218ENST00000569634 ATMQ13315 3056 aa0.8□□□□□ -2.28
TNRC6A-218ENST00000569634 PRKDCP78527 4128 aaKnown RBP0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 HTTP42858 3142 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 CENPEQ02224 2701 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 PRM1P04553 51 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 HTN3P15516 51 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 SACSQ9NZJ4 4579 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 DMXL2Q8TDJ6 3036 aa0.79□□□□□ -2.28
TNRC6A-218ENST00000569634 FBN2P35556 2912 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 ACACBO00763 2458 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 ZFYVE26Q68DK2 2539 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 TEX15Q9BXT5 2789 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 MT1AP04731 61 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 KMT2AQ03164 3969 aa0.78□□□□□ -2.28
TNRC6A-218ENST00000569634 TGP01266 2768 aa0.78□□□□□ -2.29
TNRC6A-218ENST00000569634 TACC2O95359 2948 aa0.78□□□□□ -2.29
TNRC6A-218ENST00000569634 ZZEF1O43149 2961 aa0.77□□□□□ -2.29
TNRC6A-218ENST00000569634 VPS13BQ7Z7G8 4022 aa0.77□□□□□ -2.29
TNRC6A-218ENST00000569634 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms