RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
TNRC6A-218ENST00000569634 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
TNRC6A-218ENST00000569634 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
TNRC6A-218ENST00000569634 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
TNRC6A-218ENST00000569634 FOXD1Q16676 465 aa21.91■■□□□ 1.1
TNRC6A-218ENST00000569634 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
TNRC6A-218ENST00000569634 MSH5O43196 834 aa20.75■□□□□ 0.91
TNRC6A-218ENST00000569634 PIAS4Q8N2W9 510 aaPredicted RBP20.57■□□□□ 0.88
TNRC6A-218ENST00000569634 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
TNRC6A-218ENST00000569634 ADRA2BP18089 450 aa20.38■□□□□ 0.85
TNRC6A-218ENST00000569634 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
TNRC6A-218ENST00000569634 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
TNRC6A-218ENST00000569634 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
TNRC6A-218ENST00000569634 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
TNRC6A-218ENST00000569634 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
TNRC6A-218ENST00000569634 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
TNRC6A-218ENST00000569634 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
TNRC6A-218ENST00000569634 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
TNRC6A-218ENST00000569634 DCAF8L1A6NGE4 600 aa17.96■□□□□ 0.47
TNRC6A-218ENST00000569634 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
TNRC6A-218ENST00000569634 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
TNRC6A-218ENST00000569634 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
TNRC6A-218ENST00000569634 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
TNRC6A-218ENST00000569634 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
TNRC6A-218ENST00000569634 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
TNRC6A-218ENST00000569634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
TNRC6A-218ENST00000569634 KCNA4P22459 653 aa17.03■□□□□ 0.32
TNRC6A-218ENST00000569634 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
TNRC6A-218ENST00000569634 APLP2Q06481 763 aa16.7■□□□□ 0.26
TNRC6A-218ENST00000569634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
TNRC6A-218ENST00000569634 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
TNRC6A-218ENST00000569634 CAPN15O75808 1086 aa16.59■□□□□ 0.25
TNRC6A-218ENST00000569634 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
TNRC6A-218ENST00000569634 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
TNRC6A-218ENST00000569634 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
TNRC6A-218ENST00000569634 DSG3P32926 999 aa16.43■□□□□ 0.22
TNRC6A-218ENST00000569634 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
TNRC6A-218ENST00000569634 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
TNRC6A-218ENST00000569634 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
TNRC6A-218ENST00000569634 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
TNRC6A-218ENST00000569634 ABCB7O75027 752 aa16.07■□□□□ 0.16
TNRC6A-218ENST00000569634 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
TNRC6A-218ENST00000569634 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
TNRC6A-218ENST00000569634 POLA2Q14181 598 aa15.87■□□□□ 0.13
TNRC6A-218ENST00000569634 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
TNRC6A-218ENST00000569634 POTEHQ6S545 545 aa15.73■□□□□ 0.11
TNRC6A-218ENST00000569634 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
TNRC6A-218ENST00000569634 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
TNRC6A-218ENST00000569634 ZBTB22O15209 634 aa15.55■□□□□ 0.08
TNRC6A-218ENST00000569634 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
TNRC6A-218ENST00000569634 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
TNRC6A-218ENST00000569634 FBLN2P98095 1184 aa15.34■□□□□ 0.05
TNRC6A-218ENST00000569634 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
TNRC6A-218ENST00000569634 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
TNRC6A-218ENST00000569634 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
TNRC6A-218ENST00000569634 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
TNRC6A-218ENST00000569634 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
TNRC6A-218ENST00000569634 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
TNRC6A-218ENST00000569634 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
TNRC6A-218ENST00000569634 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
TNRC6A-218ENST00000569634 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
TNRC6A-218ENST00000569634 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNRC6A-218ENST00000569634 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
TNRC6A-218ENST00000569634 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
TNRC6A-218ENST00000569634 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
TNRC6A-218ENST00000569634 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
TNRC6A-218ENST00000569634 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
TNRC6A-218ENST00000569634 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
TNRC6A-218ENST00000569634 HAX1O00165 279 aa14.76□□□□□ -0.05
TNRC6A-218ENST00000569634 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNRC6A-218ENST00000569634 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
TNRC6A-218ENST00000569634 PRR29P0C7W0 189 aa14.63□□□□□ -0.07
TNRC6A-218ENST00000569634 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
TNRC6A-218ENST00000569634 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
TNRC6A-218ENST00000569634 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
TNRC6A-218ENST00000569634 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
TNRC6A-218ENST00000569634 CLCN6P51797 869 aa14.34□□□□□ -0.11
TNRC6A-218ENST00000569634 EVX2Q03828 476 aa14.33□□□□□ -0.12
TNRC6A-218ENST00000569634 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
TNRC6A-218ENST00000569634 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
TNRC6A-218ENST00000569634 GABBR2O75899 941 aa14.19□□□□□ -0.14
TNRC6A-218ENST00000569634 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
TNRC6A-218ENST00000569634 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
TNRC6A-218ENST00000569634 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
TNRC6A-218ENST00000569634 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
TNRC6A-218ENST00000569634 PROM2Q8N271 834 aa14.01□□□□□ -0.17
TNRC6A-218ENST00000569634 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
TNRC6A-218ENST00000569634 PLEKHG5O94827 1062 aa14□□□□□ -0.17
TNRC6A-218ENST00000569634 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
TNRC6A-218ENST00000569634 LHX8Q68G74 356 aa13.87□□□□□ -0.19
TNRC6A-218ENST00000569634 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
TNRC6A-218ENST00000569634 MIER1Q8N108 512 aa13.79□□□□□ -0.2
TNRC6A-218ENST00000569634 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-218ENST00000569634 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
TNRC6A-218ENST00000569634 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
TNRC6A-218ENST00000569634 PHF12Q96QT6 1004 aa13.7□□□□□ -0.22
TNRC6A-218ENST00000569634 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
TNRC6A-218ENST00000569634 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
TNRC6A-218ENST00000569634 FKBP8Q14318 412 aa13.63□□□□□ -0.23
TNRC6A-218ENST00000569634 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms