RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.19
CX3CL1-204ENST00000565912 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
CX3CL1-204ENST00000565912 UTP20O75691 2785 aaKnown RBP7.62□□□□□ -1.19
CX3CL1-204ENST00000565912 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
CX3CL1-204ENST00000565912 EYSQ5T1H1 3165 aa7.61□□□□□ -1.19
CX3CL1-204ENST00000565912 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
CX3CL1-204ENST00000565912 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
CX3CL1-204ENST00000565912 NBEAQ8NFP9 2946 aa7.56□□□□□ -1.2
CX3CL1-204ENST00000565912 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
CX3CL1-204ENST00000565912 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
CX3CL1-204ENST00000565912 SPEGQ15772 3267 aa7.54□□□□□ -1.2
CX3CL1-204ENST00000565912 A6NN06 94 aa7.54□□□□□ -1.2
CX3CL1-204ENST00000565912 DMXL1Q9Y485 3027 aa7.54□□□□□ -1.2
CX3CL1-204ENST00000565912 REV3LO60673 3130 aa7.53□□□□□ -1.2
CX3CL1-204ENST00000565912 TNP1P09430 55 aa7.53□□□□□ -1.2
CX3CL1-204ENST00000565912 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
CX3CL1-204ENST00000565912 CFAP47Q6ZTR5 3102 aa7.51□□□□□ -1.21
CX3CL1-204ENST00000565912 APCP25054 2843 aa7.49□□□□□ -1.21
CX3CL1-204ENST00000565912 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
CX3CL1-204ENST00000565912 KMT2BQ9UMN6 2715 aaPredicted RBP7.48□□□□□ -1.21
CX3CL1-204ENST00000565912 NDUFAF8A1L188 74 aa7.48□□□□□ -1.21
CX3CL1-204ENST00000565912 ZZEF1O43149 2961 aa7.46□□□□□ -1.21
CX3CL1-204ENST00000565912 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
CX3CL1-204ENST00000565912 CRYBG3Q68DQ2 2970 aa7.42□□□□□ -1.22
CX3CL1-204ENST00000565912 LOC400499M0QZD8 3231 aa7.37□□□□□ -1.23
CX3CL1-204ENST00000565912 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
CX3CL1-204ENST00000565912 ASH1LQ9NR48 2969 aaKnown RBP7.36□□□□□ -1.23
CX3CL1-204ENST00000565912 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
CX3CL1-204ENST00000565912 MYO15AQ9UKN7 3530 aa7.35□□□□□ -1.23
CX3CL1-204ENST00000565912 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
CX3CL1-204ENST00000565912 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
CX3CL1-204ENST00000565912 TENM4Q6N022 2769 aa7.31□□□□□ -1.24
CX3CL1-204ENST00000565912 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
CX3CL1-204ENST00000565912 XP32Q5T750 250 aa7.28□□□□□ -1.24
CX3CL1-204ENST00000565912 NIPBLQ6KC79 2804 aaeCLIP7.27□□□□□ -1.25
CX3CL1-204ENST00000565912 DCHS2Q6V1P9 2916 aa7.24□□□□□ -1.25
CX3CL1-204ENST00000565912 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
CX3CL1-204ENST00000565912 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
CX3CL1-204ENST00000565912 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
CX3CL1-204ENST00000565912 FBN2P35556 2912 aa7.13□□□□□ -1.27
CX3CL1-204ENST00000565912 RELNP78509 3460 aa7.13□□□□□ -1.27
CX3CL1-204ENST00000565912 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
CX3CL1-204ENST00000565912 H0YAA0 97 aa7.09□□□□□ -1.27
CX3CL1-204ENST00000565912 NF1P21359 2839 aa7.07□□□□□ -1.28
CX3CL1-204ENST00000565912 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
CX3CL1-204ENST00000565912 P0C880 135 aa7.05□□□□□ -1.28
CX3CL1-204ENST00000565912 ASPMQ8IZT6 3477 aa7.05□□□□□ -1.28
CX3CL1-204ENST00000565912 WDFY3Q8IZQ1 3526 aa7.05□□□□□ -1.28
CX3CL1-204ENST00000565912 LAMA5O15230 3695 aa7.01□□□□□ -1.29
CX3CL1-204ENST00000565912 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
CX3CL1-204ENST00000565912 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
CX3CL1-204ENST00000565912 CELSR1Q9NYQ6 3014 aa6.95□□□□□ -1.3
CX3CL1-204ENST00000565912 ZFHX4Q86UP3 3567 aa6.95□□□□□ -1.3
CX3CL1-204ENST00000565912 DMDP11532 3685 aa6.94□□□□□ -1.3
CX3CL1-204ENST00000565912 MXRA5Q9NR99 2828 aa6.94□□□□□ -1.3
CX3CL1-204ENST00000565912 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
CX3CL1-204ENST00000565912 NBPF19A0A087WUL8 3843 aa6.89□□□□□ -1.31
CX3CL1-204ENST00000565912 PDZD2O15018 2839 aa6.88□□□□□ -1.31
CX3CL1-204ENST00000565912 TENM1Q9UKZ4 2725 aa6.87□□□□□ -1.31
CX3CL1-204ENST00000565912 TENM3Q9P273 2699 aa6.84□□□□□ -1.32
CX3CL1-204ENST00000565912 MUC3AQ02505 3323 aa6.84□□□□□ -1.32
CX3CL1-204ENST00000565912 CSMD1Q96PZ7 3565 aa6.72□□□□□ -1.33
CX3CL1-204ENST00000565912 OTOGQ6ZRI0 2925 aa6.72□□□□□ -1.33
CX3CL1-204ENST00000565912 KRTAP12-2P59991 146 aa6.71□□□□□ -1.33
CX3CL1-204ENST00000565912 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.33
CX3CL1-204ENST00000565912 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
CX3CL1-204ENST00000565912 ANK3Q12955 4377 aaKnown RBP6.66□□□□□ -1.34
CX3CL1-204ENST00000565912 TGP01266 2768 aa6.65□□□□□ -1.35
CX3CL1-204ENST00000565912 ZFHX3Q15911 3703 aa6.64□□□□□ -1.35
CX3CL1-204ENST00000565912 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
CX3CL1-204ENST00000565912 VWFP04275 2813 aa6.59□□□□□ -1.35
CX3CL1-204ENST00000565912 FBN1P35555 2871 aaKnown RBP6.59□□□□□ -1.35
CX3CL1-204ENST00000565912 SVEP1Q4LDE5 3571 aa6.56□□□□□ -1.36
CX3CL1-204ENST00000565912 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
CX3CL1-204ENST00000565912 SPENQ96T58 3664 aaKnown RBP6.54□□□□□ -1.36
CX3CL1-204ENST00000565912 CSMD2Q7Z408 3487 aa6.54□□□□□ -1.36
CX3CL1-204ENST00000565912 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
CX3CL1-204ENST00000565912 BSNQ9UPA5 3926 aa6.47□□□□□ -1.37
CX3CL1-204ENST00000565912 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
CX3CL1-204ENST00000565912 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.38
CX3CL1-204ENST00000565912 CUBNO60494 3623 aa6.33□□□□□ -1.4
CX3CL1-204ENST00000565912 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
CX3CL1-204ENST00000565912 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
CX3CL1-204ENST00000565912 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
CX3CL1-204ENST00000565912 HUWE1Q7Z6Z7 4374 aaKnown RBP6.24□□□□□ -1.41
CX3CL1-204ENST00000565912 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
CX3CL1-204ENST00000565912 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
CX3CL1-204ENST00000565912 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
CX3CL1-204ENST00000565912 VPS13CQ709C8 3753 aa6.15□□□□□ -1.42
CX3CL1-204ENST00000565912 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
CX3CL1-204ENST00000565912 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
CX3CL1-204ENST00000565912 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
CX3CL1-204ENST00000565912 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
CX3CL1-204ENST00000565912 INE1O15225 51 aa6.03□□□□□ -1.44
CX3CL1-204ENST00000565912 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.44
CX3CL1-204ENST00000565912 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
CX3CL1-204ENST00000565912 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
CX3CL1-204ENST00000565912 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
CX3CL1-204ENST00000565912 ZNF469Q96JG9 3925 aaPredicted RBP5.98□□□□□ -1.45
CX3CL1-204ENST00000565912 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms