RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 ABCA13Q86UQ4 5058 aa13.33□□□□□ -0.28
ZNF688-204ENST00000563665 A0A1B0GVX0 72 aa13.32□□□□□ -0.28
ZNF688-204ENST00000563665 DMBT1Q9UGM3 2413 aaPredicted RBP13.3□□□□□ -0.28
ZNF688-204ENST00000563665 SCGB1A1P11684 91 aa13.27□□□□□ -0.29
ZNF688-204ENST00000563665 IGHV6-1A0A0B4J1U7 121 aa13.24□□□□□ -0.29
ZNF688-204ENST00000563665 FAM236AA0A1B0GUQ0 79 aa13.23□□□□□ -0.29
ZNF688-204ENST00000563665 FAM236BA0A1B0GV22 79 aa13.23□□□□□ -0.29
ZNF688-204ENST00000563665 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
ZNF688-204ENST00000563665 C8orf17Q9NRJ1 99 aa13.22□□□□□ -0.29
ZNF688-204ENST00000563665 MMP24-AS1A0A0U1RRL7 71 aa13.22□□□□□ -0.29
ZNF688-204ENST00000563665 C8orf87E5RJ46 101 aa13.22□□□□□ -0.29
ZNF688-204ENST00000563665 RETNLBQ9BQ08 111 aa13.21□□□□□ -0.3
ZNF688-204ENST00000563665 J3QL48 77 aa13.19□□□□□ -0.3
ZNF688-204ENST00000563665 FP248Q71RG6 208 aaPredicted RBP13.19□□□□□ -0.3
ZNF688-204ENST00000563665 CASC2Q6XLA1 102 aa13.15□□□□□ -0.3
ZNF688-204ENST00000563665 NOTCH2NLQ7Z3S9 236 aa13.14□□□□□ -0.31
ZNF688-204ENST00000563665 WFDC13Q8IUB5 93 aa13.14□□□□□ -0.31
ZNF688-204ENST00000563665 hDV103S1A0JD37 113 aa13.13□□□□□ -0.31
ZNF688-204ENST00000563665 LINC00313P59037 77 aa13.13□□□□□ -0.31
ZNF688-204ENST00000563665 ATOX1O00244 68 aa13.1□□□□□ -0.31
ZNF688-204ENST00000563665 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
ZNF688-204ENST00000563665 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
ZNF688-204ENST00000563665 IGLV7-46A0A075B6I9 117 aa13.03□□□□□ -0.32
ZNF688-204ENST00000563665 KRTAP16-1A8MUX0 517 aa13.03□□□□□ -0.32
ZNF688-204ENST00000563665 SMIM20Q8N5G0 67 aa13.02□□□□□ -0.33
ZNF688-204ENST00000563665 OCR1Q9BZK8 76 aa12.98□□□□□ -0.33
ZNF688-204ENST00000563665 PRR4Q16378 134 aa12.96□□□□□ -0.33
ZNF688-204ENST00000563665 C9orf92A6NGG3 77 aa12.96□□□□□ -0.34
ZNF688-204ENST00000563665 Q8N9P0 234 aaPredicted RBP12.96□□□□□ -0.34
ZNF688-204ENST00000563665 ANAPC13Q9BS18 74 aa12.95□□□□□ -0.34
ZNF688-204ENST00000563665 PCLOQ9Y6V0 5065 aa12.95□□□□□ -0.34
ZNF688-204ENST00000563665 TRAV7A0A075B6U4 112 aa12.94□□□□□ -0.34
ZNF688-204ENST00000563665 KRTAP13-3Q3SY46 172 aa12.93□□□□□ -0.34
ZNF688-204ENST00000563665 SERP2Q8N6R1 65 aa12.92□□□□□ -0.34
ZNF688-204ENST00000563665 TP53AIP1Q9HCN2 124 aa12.92□□□□□ -0.34
ZNF688-204ENST00000563665 NDUFS5O43920 106 aa12.9□□□□□ -0.34
ZNF688-204ENST00000563665 UQCRQO14949 82 aa12.88□□□□□ -0.35
ZNF688-204ENST00000563665 TPRXLQ17RH7 258 aa12.88□□□□□ -0.35
ZNF688-204ENST00000563665 C20orf166-AS1Q96NR2 134 aa12.88□□□□□ -0.35
ZNF688-204ENST00000563665 A8MUU9 505 aa12.85□□□□□ -0.35
ZNF688-204ENST00000563665 COX7CP15954 63 aa12.82□□□□□ -0.36
ZNF688-204ENST00000563665 Q75L30 129 aa12.79□□□□□ -0.36
ZNF688-204ENST00000563665 C5orf47Q569G3 176 aa12.78□□□□□ -0.36
ZNF688-204ENST00000563665 XP32Q5T750 250 aa12.78□□□□□ -0.36
ZNF688-204ENST00000563665 TRAV22A0A0B4J277 110 aa12.77□□□□□ -0.37
ZNF688-204ENST00000563665 PCP4P48539 62 aa12.76□□□□□ -0.37
ZNF688-204ENST00000563665 H0Y9P7 68 aa12.71□□□□□ -0.37
ZNF688-204ENST00000563665 Q5W150 140 aa12.71□□□□□ -0.38
ZNF688-204ENST00000563665 MP68P56378 58 aa12.7□□□□□ -0.38
ZNF688-204ENST00000563665 RPL37P61927 97 aaKnown RBP12.7□□□□□ -0.38
ZNF688-204ENST00000563665 ZCCHC13Q8WW36 166 aaKnown RBP12.7□□□□□ -0.38
ZNF688-204ENST00000563665 H3BPC8 53 aa12.68□□□□□ -0.38
ZNF688-204ENST00000563665 CCDC179H3BU77 68 aa12.65□□□□□ -0.38
ZNF688-204ENST00000563665 C20orf197Q8N268 126 aa12.65□□□□□ -0.38
ZNF688-204ENST00000563665 A0A0U1RQV1 116 aa12.63□□□□□ -0.39
ZNF688-204ENST00000563665 KLKP1Q107X0 134 aa12.61□□□□□ -0.39
ZNF688-204ENST00000563665 LINC00208Q96KT6 92 aa12.61□□□□□ -0.39
ZNF688-204ENST00000563665 ATP11AUNQ6ZP68 121 aa12.58□□□□□ -0.4
ZNF688-204ENST00000563665 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.4
ZNF688-204ENST00000563665 LOC101927531A0A1B0GV80 90 aa12.56□□□□□ -0.4
ZNF688-204ENST00000563665 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
ZNF688-204ENST00000563665 LPAP08519 4548 aa12.53□□□□□ -0.4
ZNF688-204ENST00000563665 HERC1Q15751 4861 aa12.53□□□□□ -0.4
ZNF688-204ENST00000563665 IGKV2-30P06310 120 aa12.51□□□□□ -0.41
ZNF688-204ENST00000563665 NDUFC1O43677 76 aa12.46□□□□□ -0.41
ZNF688-204ENST00000563665 CYP4F30PQ9H0H9 118 aa12.46□□□□□ -0.41
ZNF688-204ENST00000563665 CYSTM1Q9H1C7 97 aa12.45□□□□□ -0.42
ZNF688-204ENST00000563665 LRP2P98164 4655 aa12.45□□□□□ -0.42
ZNF688-204ENST00000563665 HMCN2Q8NDA2 5059 aa12.45□□□□□ -0.42
ZNF688-204ENST00000563665 C7orf65Q6ZTY9 151 aa12.45□□□□□ -0.42
ZNF688-204ENST00000563665 IGKV2D-30A0A075B6S6 120 aa12.44□□□□□ -0.42
ZNF688-204ENST00000563665 SEC61BP60468 96 aaKnown RBP12.43□□□□□ -0.42
ZNF688-204ENST00000563665 PCOTHQ58A44 107 aa12.43□□□□□ -0.42
ZNF688-204ENST00000563665 H7BZZ5 65 aa12.39□□□□□ -0.43
ZNF688-204ENST00000563665 SPINK7P58062 85 aa12.37□□□□□ -0.43
ZNF688-204ENST00000563665 MUC17Q685J3 4493 aa12.28□□□□□ -0.44
ZNF688-204ENST00000563665 SPANXA2-OT1Q8N9U9 137 aa12.26□□□□□ -0.45
ZNF688-204ENST00000563665 HRES1P13985 223 aa12.25□□□□□ -0.45
ZNF688-204ENST00000563665 TMEM258P61165 79 aa12.25□□□□□ -0.45
ZNF688-204ENST00000563665 ATP5EP56381 51 aaPredicted RBP12.17□□□□□ -0.46
ZNF688-204ENST00000563665 FAM236DA0A1B0GTK5 79 aa12.14□□□□□ -0.47
ZNF688-204ENST00000563665 FAM236CP0DP71 79 aa12.14□□□□□ -0.47
ZNF688-204ENST00000563665 KRTAP4-1Q9BYQ7 146 aa12.11□□□□□ -0.47
ZNF688-204ENST00000563665 C4orf26Q17RF5 130 aa12.11□□□□□ -0.47
ZNF688-204ENST00000563665 MPLKIPQ8TAP9 179 aa12.07□□□□□ -0.48
ZNF688-204ENST00000563665 DMAC1Q96GE9 116 aa12.06□□□□□ -0.48
ZNF688-204ENST00000563665 COX6B2Q6YFQ2 88 aa12.05□□□□□ -0.48
ZNF688-204ENST00000563665 A8MUN3 132 aa12.03□□□□□ -0.48
ZNF688-204ENST00000563665 RBM12B-AS1Q9P1G2 102 aa11.98□□□□□ -0.49
ZNF688-204ENST00000563665 KRTAP3-1Q9BYR8 98 aa11.97□□□□□ -0.49
ZNF688-204ENST00000563665 ACYP2P14621 99 aa11.94□□□□□ -0.5
ZNF688-204ENST00000563665 SERP1Q9Y6X1 66 aa11.86□□□□□ -0.51
ZNF688-204ENST00000563665 UBR4Q5T4S7 5183 aa11.86□□□□□ -0.51
ZNF688-204ENST00000563665 COA5Q86WW8 74 aa11.84□□□□□ -0.51
ZNF688-204ENST00000563665 H1FX-AS1Q4G0G2 97 aa11.81□□□□□ -0.52
ZNF688-204ENST00000563665 KRTAP19-2Q3LHN2 52 aa11.79□□□□□ -0.52
ZNF688-204ENST00000563665 RNF213Q63HN8 5207 aa11.79□□□□□ -0.52
ZNF688-204ENST00000563665 RPS28P62857 69 aaKnown RBP11.76□□□□□ -0.53
ZNF688-204ENST00000563665 MUC2Q02817 5179 aa11.72□□□□□ -0.53
ZNF688-204ENST00000563665 CHKB-CPT1BH3BT56 60 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms