RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 H3BQ85 93 aa5.29□□□□□ -1.56
CLK3-205ENST00000561673 TMEM256-PLSCR3K7ERE1 68 aa5.29□□□□□ -1.56
CLK3-205ENST00000561673 COX6CP09669 75 aa5.28□□□□□ -1.56
CLK3-205ENST00000561673 SIGMAR1Q99720 223 aa5.28□□□□□ -1.56
CLK3-205ENST00000561673 IGKV4-1P06312 121 aa5.27□□□□□ -1.57
CLK3-205ENST00000561673 LINC00313P59037 77 aa5.27□□□□□ -1.57
CLK3-205ENST00000561673 UQCR10Q9UDW1 63 aa5.27□□□□□ -1.57
CLK3-205ENST00000561673 CCKP06307 115 aa5.26□□□□□ -1.57
CLK3-205ENST00000561673 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
CLK3-205ENST00000561673 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
CLK3-205ENST00000561673 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
CLK3-205ENST00000561673 UBE2V1Q13404 147 aa5.25□□□□□ -1.57
CLK3-205ENST00000561673 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
CLK3-205ENST00000561673 TRBV20-1A0A075B6N2 111 aa5.24□□□□□ -1.57
CLK3-205ENST00000561673 TRACP01848 142 aa5.23□□□□□ -1.57
CLK3-205ENST00000561673 SCGB1C2P0DMR2 95 aa5.23□□□□□ -1.57
CLK3-205ENST00000561673 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
CLK3-205ENST00000561673 IGHV6-1A0A0B4J1U7 121 aa5.21□□□□□ -1.58
CLK3-205ENST00000561673 RBM3P98179 157 aaKnown RBP5.21□□□□□ -1.58
CLK3-205ENST00000561673 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
CLK3-205ENST00000561673 VPS25Q9BRG1 176 aa5.2□□□□□ -1.58
CLK3-205ENST00000561673 M0R143 59 aa5.19□□□□□ -1.58
CLK3-205ENST00000561673 BAALC-AS2P0C853 105 aa5.19□□□□□ -1.58
CLK3-205ENST00000561673 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
CLK3-205ENST00000561673 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
CLK3-205ENST00000561673 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
CLK3-205ENST00000561673 BATFQ16520 125 aa5.17□□□□□ -1.58
CLK3-205ENST00000561673 USH2AO75445 5202 aa5.16□□□□□ -1.58
CLK3-205ENST00000561673 C9JAW5 83 aa5.16□□□□□ -1.58
CLK3-205ENST00000561673 HRES1P13985 223 aa5.16□□□□□ -1.58
CLK3-205ENST00000561673 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
CLK3-205ENST00000561673 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
CLK3-205ENST00000561673 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
CLK3-205ENST00000561673 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
CLK3-205ENST00000561673 Q6ZQT0 140 aa5.14□□□□□ -1.59
CLK3-205ENST00000561673 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
CLK3-205ENST00000561673 J3KT08 172 aa5.13□□□□□ -1.59
CLK3-205ENST00000561673 COL5A1-AS1Q5SY13 56 aa5.13□□□□□ -1.59
CLK3-205ENST00000561673 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
CLK3-205ENST00000561673 ATXN8Q156A1 80 aa5.12□□□□□ -1.59
CLK3-205ENST00000561673 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
CLK3-205ENST00000561673 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
CLK3-205ENST00000561673 JMJD7-PLA2G4BH0Y9G9 81 aa5.1□□□□□ -1.59
CLK3-205ENST00000561673 MT2AP02795 61 aa5.1□□□□□ -1.59
CLK3-205ENST00000561673 ZCCHC13Q8WW36 166 aaKnown RBP5.1□□□□□ -1.59
CLK3-205ENST00000561673 LOC110117498A0A087WWA1 95 aa5.09□□□□□ -1.59
CLK3-205ENST00000561673 NDUFB1O75438 58 aa5.09□□□□□ -1.59
CLK3-205ENST00000561673 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
CLK3-205ENST00000561673 SPINK7P58062 85 aa5.08□□□□□ -1.6
CLK3-205ENST00000561673 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
CLK3-205ENST00000561673 A0A1B0GW54 56 aa5.07□□□□□ -1.6
CLK3-205ENST00000561673 A8MWP4 228 aa5.07□□□□□ -1.6
CLK3-205ENST00000561673 PDE6GP18545 87 aa5.07□□□□□ -1.6
CLK3-205ENST00000561673 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
CLK3-205ENST00000561673 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
CLK3-205ENST00000561673 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
CLK3-205ENST00000561673 MT1FP04733 61 aa5.06□□□□□ -1.6
CLK3-205ENST00000561673 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
CLK3-205ENST00000561673 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
CLK3-205ENST00000561673 A0A1B0GV90 55 aa5.05□□□□□ -1.6
CLK3-205ENST00000561673 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
CLK3-205ENST00000561673 TAX1BP3O14907 124 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 NREPQ16612 68 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 Q6ZVQ6 151 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
CLK3-205ENST00000561673 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CLK3-205ENST00000561673 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
CLK3-205ENST00000561673 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
CLK3-205ENST00000561673 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
CLK3-205ENST00000561673 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
CLK3-205ENST00000561673 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
CLK3-205ENST00000561673 GTF2H5Q6ZYL4 71 aa4.97□□□□□ -1.61
CLK3-205ENST00000561673 TMEM254Q8TBM7 123 aa4.97□□□□□ -1.61
CLK3-205ENST00000561673 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
CLK3-205ENST00000561673 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
CLK3-205ENST00000561673 H3BT86 120 aa4.96□□□□□ -1.62
CLK3-205ENST00000561673 K7EQZ3 153 aa4.96□□□□□ -1.62
CLK3-205ENST00000561673 SPCS1Q9Y6A9 102 aa4.96□□□□□ -1.62
CLK3-205ENST00000561673 K7EP34 96 aa4.94□□□□□ -1.62
CLK3-205ENST00000561673 NDUFS5O43920 106 aa4.93□□□□□ -1.62
CLK3-205ENST00000561673 BPY2O14599 106 aa4.92□□□□□ -1.62
CLK3-205ENST00000561673 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
CLK3-205ENST00000561673 Q5W150 140 aa4.9□□□□□ -1.63
CLK3-205ENST00000561673 Q8N9L7 120 aa4.89□□□□□ -1.63
CLK3-205ENST00000561673 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
CLK3-205ENST00000561673 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
CLK3-205ENST00000561673 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
CLK3-205ENST00000561673 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
CLK3-205ENST00000561673 F8W1H4 67 aa4.86□□□□□ -1.63
CLK3-205ENST00000561673 CASC2Q6XLA1 102 aa4.86□□□□□ -1.63
CLK3-205ENST00000561673 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
CLK3-205ENST00000561673 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
CLK3-205ENST00000561673 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
CLK3-205ENST00000561673 LINC00846Q9NV44 126 aa4.82□□□□□ -1.64
CLK3-205ENST00000561673 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
CLK3-205ENST00000561673 CXCL6P80162 114 aa4.81□□□□□ -1.64
CLK3-205ENST00000561673 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
CLK3-205ENST00000561673 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms