RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 WFDC13Q8IUB5 93 aa11.61□□□□□ -0.55
SNRPA1-205ENST00000558036 HCG22E2RYF7 251 aa11.6□□□□□ -0.55
SNRPA1-205ENST00000558036 ATOX1O00244 68 aa11.6□□□□□ -0.55
SNRPA1-205ENST00000558036 KRTAP10-8P60410 259 aa11.6□□□□□ -0.55
SNRPA1-205ENST00000558036 A0A1B0GVX0 72 aa11.59□□□□□ -0.55
SNRPA1-205ENST00000558036 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
SNRPA1-205ENST00000558036 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-205ENST00000558036 ABCA13Q86UQ4 5058 aa11.56□□□□□ -0.56
SNRPA1-205ENST00000558036 MMP24-AS1A0A0U1RRL7 71 aa11.55□□□□□ -0.56
SNRPA1-205ENST00000558036 HERC2O95714 4834 aa11.55□□□□□ -0.56
SNRPA1-205ENST00000558036 CASC2Q6XLA1 102 aa11.53□□□□□ -0.56
SNRPA1-205ENST00000558036 C8orf17Q9NRJ1 99 aa11.53□□□□□ -0.56
SNRPA1-205ENST00000558036 KRTAP29-1A8MX34 341 aaPredicted RBP11.52□□□□□ -0.57
SNRPA1-205ENST00000558036 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
SNRPA1-205ENST00000558036 MT1HL1P0DM35 61 aa11.5□□□□□ -0.57
SNRPA1-205ENST00000558036 hDV103S1A0JD37 113 aa11.48□□□□□ -0.57
SNRPA1-205ENST00000558036 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
SNRPA1-205ENST00000558036 OCR1Q9BZK8 76 aa11.46□□□□□ -0.57
SNRPA1-205ENST00000558036 CCDC179H3BU77 68 aa11.45□□□□□ -0.58
SNRPA1-205ENST00000558036 DMBT1Q9UGM3 2413 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-205ENST00000558036 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
SNRPA1-205ENST00000558036 COX7CP15954 63 aa11.42□□□□□ -0.58
SNRPA1-205ENST00000558036 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
SNRPA1-205ENST00000558036 LINC00313P59037 77 aa11.4□□□□□ -0.58
SNRPA1-205ENST00000558036 C8orf87E5RJ46 101 aa11.38□□□□□ -0.59
SNRPA1-205ENST00000558036 UQCRQO14949 82 aa11.37□□□□□ -0.59
SNRPA1-205ENST00000558036 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-205ENST00000558036 OXTP01178 125 aa11.36□□□□□ -0.59
SNRPA1-205ENST00000558036 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
SNRPA1-205ENST00000558036 NDUFS5O43920 106 aa11.35□□□□□ -0.59
SNRPA1-205ENST00000558036 C20orf197Q8N268 126 aa11.32□□□□□ -0.6
SNRPA1-205ENST00000558036 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
SNRPA1-205ENST00000558036 KRTAP16-1A8MUX0 517 aa11.31□□□□□ -0.6
SNRPA1-205ENST00000558036 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
SNRPA1-205ENST00000558036 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
SNRPA1-205ENST00000558036 Q8N9P0 234 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-205ENST00000558036 TP53AIP1Q9HCN2 124 aa11.21□□□□□ -0.61
SNRPA1-205ENST00000558036 C5orf47Q569G3 176 aa11.21□□□□□ -0.62
SNRPA1-205ENST00000558036 PCLOQ9Y6V0 5065 aa11.2□□□□□ -0.62
SNRPA1-205ENST00000558036 H0Y9P7 68 aa11.2□□□□□ -0.62
SNRPA1-205ENST00000558036 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
SNRPA1-205ENST00000558036 Q5W150 140 aa11.18□□□□□ -0.62
SNRPA1-205ENST00000558036 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
SNRPA1-205ENST00000558036 J3QL48 77 aa11.17□□□□□ -0.62
SNRPA1-205ENST00000558036 IGLV7-46A0A075B6I9 117 aa11.17□□□□□ -0.62
SNRPA1-205ENST00000558036 FP248Q71RG6 208 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-205ENST00000558036 KLKP1Q107X0 134 aa11.16□□□□□ -0.62
SNRPA1-205ENST00000558036 MP68P56378 58 aa11.15□□□□□ -0.62
SNRPA1-205ENST00000558036 PRR4Q16378 134 aa11.15□□□□□ -0.62
SNRPA1-205ENST00000558036 LINC00208Q96KT6 92 aa11.15□□□□□ -0.62
SNRPA1-205ENST00000558036 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
SNRPA1-205ENST00000558036 C1orf64Q8NEQ6 169 aa11.09□□□□□ -0.63
SNRPA1-205ENST00000558036 ZCCHC13Q8WW36 166 aaKnown RBP11.09□□□□□ -0.63
SNRPA1-205ENST00000558036 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
SNRPA1-205ENST00000558036 H7BZZ5 65 aa11.06□□□□□ -0.64
SNRPA1-205ENST00000558036 A8MUU9 505 aa11.05□□□□□ -0.64
SNRPA1-205ENST00000558036 LPAP08519 4548 aa11.04□□□□□ -0.64
SNRPA1-205ENST00000558036 H3BPC8 53 aa11.02□□□□□ -0.65
SNRPA1-205ENST00000558036 XP32Q5T750 250 aa10.99□□□□□ -0.65
SNRPA1-205ENST00000558036 HERC1Q15751 4861 aa10.98□□□□□ -0.65
SNRPA1-205ENST00000558036 NDUFC1O43677 76 aa10.97□□□□□ -0.65
SNRPA1-205ENST00000558036 Q75L30 129 aa10.96□□□□□ -0.65
SNRPA1-205ENST00000558036 PCOTHQ58A44 107 aa10.95□□□□□ -0.66
SNRPA1-205ENST00000558036 LRP2P98164 4655 aa10.94□□□□□ -0.66
SNRPA1-205ENST00000558036 LOC101927531A0A1B0GV80 90 aa10.93□□□□□ -0.66
SNRPA1-205ENST00000558036 TPRXLQ17RH7 258 aa10.92□□□□□ -0.66
SNRPA1-205ENST00000558036 IGKV2D-30A0A075B6S6 120 aa10.91□□□□□ -0.66
SNRPA1-205ENST00000558036 IGKV2-30P06310 120 aa10.91□□□□□ -0.66
SNRPA1-205ENST00000558036 TMEM258P61165 79 aa10.91□□□□□ -0.66
SNRPA1-205ENST00000558036 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
SNRPA1-205ENST00000558036 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
SNRPA1-205ENST00000558036 FAM236DA0A1B0GTK5 79 aa10.85□□□□□ -0.67
SNRPA1-205ENST00000558036 FAM236CP0DP71 79 aa10.85□□□□□ -0.67
SNRPA1-205ENST00000558036 ATP11AUNQ6ZP68 121 aa10.84□□□□□ -0.67
SNRPA1-205ENST00000558036 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
SNRPA1-205ENST00000558036 HRES1P13985 223 aa10.76□□□□□ -0.69
SNRPA1-205ENST00000558036 HMCN2Q8NDA2 5059 aa10.76□□□□□ -0.69
SNRPA1-205ENST00000558036 SPINK7P58062 85 aa10.75□□□□□ -0.69
SNRPA1-205ENST00000558036 SPANXA2-OT1Q8N9U9 137 aa10.73□□□□□ -0.69
SNRPA1-205ENST00000558036 ATP5EP56381 51 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-205ENST00000558036 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
SNRPA1-205ENST00000558036 SERP1Q9Y6X1 66 aa10.58□□□□□ -0.72
SNRPA1-205ENST00000558036 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
SNRPA1-205ENST00000558036 SEC61BP60468 96 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-205ENST00000558036 RPS28P62857 69 aaKnown RBP10.51□□□□□ -0.73
SNRPA1-205ENST00000558036 COA5Q86WW8 74 aa10.49□□□□□ -0.73
SNRPA1-205ENST00000558036 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
SNRPA1-205ENST00000558036 MUC2Q02817 5179 aa10.47□□□□□ -0.73
SNRPA1-205ENST00000558036 ACYP2P14621 99 aa10.46□□□□□ -0.73
SNRPA1-205ENST00000558036 MUC17Q685J3 4493 aa10.46□□□□□ -0.73
SNRPA1-205ENST00000558036 KRTAP4-1Q9BYQ7 146 aa10.44□□□□□ -0.74
SNRPA1-205ENST00000558036 COX6B2Q6YFQ2 88 aa10.43□□□□□ -0.74
SNRPA1-205ENST00000558036 A8MUN3 132 aa10.37□□□□□ -0.75
SNRPA1-205ENST00000558036 UBR4Q5T4S7 5183 aa10.35□□□□□ -0.75
SNRPA1-205ENST00000558036 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
SNRPA1-205ENST00000558036 MPLKIPQ8TAP9 179 aa10.34□□□□□ -0.75
SNRPA1-205ENST00000558036 SMIM26A0A096LP01 95 aa10.3□□□□□ -0.76
SNRPA1-205ENST00000558036 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
SNRPA1-205ENST00000558036 RNF213Q63HN8 5207 aa10.22□□□□□ -0.77
SNRPA1-205ENST00000558036 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms