RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 JMJD7-PLA2G4BH0Y9G9 81 aa11.68□□□□□ -0.54
PABPN1-207ENST00000556821 LYRM7Q5U5X0 104 aa11.68□□□□□ -0.54
PABPN1-207ENST00000556821 LOC110117498A0A087WWA1 95 aa11.67□□□□□ -0.54
PABPN1-207ENST00000556821 IGHV6-1A0A0B4J1U7 121 aa11.67□□□□□ -0.54
PABPN1-207ENST00000556821 TRBV20-1A0A075B6N2 111 aa11.66□□□□□ -0.54
PABPN1-207ENST00000556821 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
PABPN1-207ENST00000556821 C21orf62-AS1Q17RA5 79 aa11.64□□□□□ -0.55
PABPN1-207ENST00000556821 C14orf132Q9NPU4 83 aa11.63□□□□□ -0.55
PABPN1-207ENST00000556821 FLGP20930 4061 aaPredicted RBP11.63□□□□□ -0.55
PABPN1-207ENST00000556821 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
PABPN1-207ENST00000556821 SSPOA2VEC9 5147 aa11.61□□□□□ -0.55
PABPN1-207ENST00000556821 C9orf118A6NHY6 69 aa11.61□□□□□ -0.55
PABPN1-207ENST00000556821 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
PABPN1-207ENST00000556821 J3KT08 172 aa11.59□□□□□ -0.55
PABPN1-207ENST00000556821 M0R2T5 61 aa11.59□□□□□ -0.55
PABPN1-207ENST00000556821 A0A1B0GW54 56 aa11.58□□□□□ -0.56
PABPN1-207ENST00000556821 PDE6GP18545 87 aa11.58□□□□□ -0.56
PABPN1-207ENST00000556821 A0A1W2PPM0 123 aa11.56□□□□□ -0.56
PABPN1-207ENST00000556821 USH2AO75445 5202 aa11.55□□□□□ -0.56
PABPN1-207ENST00000556821 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
PABPN1-207ENST00000556821 H3BT86 120 aa11.52□□□□□ -0.57
PABPN1-207ENST00000556821 A8MWP4 228 aa11.48□□□□□ -0.57
PABPN1-207ENST00000556821 NDUFB1O75438 58 aa11.47□□□□□ -0.57
PABPN1-207ENST00000556821 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
PABPN1-207ENST00000556821 FCGBPQ9Y6R7 5405 aaPredicted RBP11.45□□□□□ -0.58
PABPN1-207ENST00000556821 HRES1P13985 223 aa11.45□□□□□ -0.58
PABPN1-207ENST00000556821 C8orf17Q9NRJ1 99 aa11.45□□□□□ -0.58
PABPN1-207ENST00000556821 Q8N9P0 234 aaPredicted RBP11.43□□□□□ -0.58
PABPN1-207ENST00000556821 MPLKIPQ8TAP9 179 aa11.43□□□□□ -0.58
PABPN1-207ENST00000556821 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
PABPN1-207ENST00000556821 NREPQ16612 68 aa11.4□□□□□ -0.58
PABPN1-207ENST00000556821 SPCS1Q9Y6A9 102 aa11.4□□□□□ -0.58
PABPN1-207ENST00000556821 PRR15Q8IV56 129 aa11.38□□□□□ -0.59
PABPN1-207ENST00000556821 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
PABPN1-207ENST00000556821 Q6ZVQ6 151 aa11.33□□□□□ -0.6
PABPN1-207ENST00000556821 MMP24-AS1A0A0U1RRL7 71 aa11.32□□□□□ -0.6
PABPN1-207ENST00000556821 FAM236DA0A1B0GTK5 79 aa11.32□□□□□ -0.6
PABPN1-207ENST00000556821 FAM236CP0DP71 79 aa11.32□□□□□ -0.6
PABPN1-207ENST00000556821 COL5A1-AS1Q5SY13 56 aa11.32□□□□□ -0.6
PABPN1-207ENST00000556821 RBM12B-AS1Q9P1G2 102 aa11.31□□□□□ -0.6
PABPN1-207ENST00000556821 K7EQZ3 153 aa11.3□□□□□ -0.6
PABPN1-207ENST00000556821 SPINK7P58062 85 aa11.29□□□□□ -0.6
PABPN1-207ENST00000556821 PRO0461Q9UI25 63 aa11.28□□□□□ -0.6
PABPN1-207ENST00000556821 TMEM254Q8TBM7 123 aa11.27□□□□□ -0.61
PABPN1-207ENST00000556821 SYNE2Q8WXH0 6885 aaKnown RBP11.26□□□□□ -0.61
PABPN1-207ENST00000556821 KRTAP9-8Q9BYQ0 159 aa11.26□□□□□ -0.61
PABPN1-207ENST00000556821 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
PABPN1-207ENST00000556821 K7EP34 96 aa11.24□□□□□ -0.61
PABPN1-207ENST00000556821 MACF1Q9UPN3 7388 aaKnown RBP11.23□□□□□ -0.61
PABPN1-207ENST00000556821 BPY2O14599 106 aa11.22□□□□□ -0.61
PABPN1-207ENST00000556821 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
PABPN1-207ENST00000556821 KRTAP19-1Q8IUB9 90 aa11.18□□□□□ -0.62
PABPN1-207ENST00000556821 Q8N9L7 120 aa11.16□□□□□ -0.62
PABPN1-207ENST00000556821 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
PABPN1-207ENST00000556821 LINC00846Q9NV44 126 aa11.13□□□□□ -0.63
PABPN1-207ENST00000556821 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
PABPN1-207ENST00000556821 NDUFS5O43920 106 aa11.11□□□□□ -0.63
PABPN1-207ENST00000556821 MT2AP02795 61 aa11.11□□□□□ -0.63
PABPN1-207ENST00000556821 CASC2Q6XLA1 102 aa11.06□□□□□ -0.64
PABPN1-207ENST00000556821 GTF2H5Q6ZYL4 71 aa11.06□□□□□ -0.64
PABPN1-207ENST00000556821 Q5W150 140 aa11.05□□□□□ -0.64
PABPN1-207ENST00000556821 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
PABPN1-207ENST00000556821 LCE2BO14633 110 aa11.03□□□□□ -0.64
PABPN1-207ENST00000556821 MT1FP04733 61 aa11.03□□□□□ -0.64
PABPN1-207ENST00000556821 HCG22E2RYF7 251 aa10.99□□□□□ -0.65
PABPN1-207ENST00000556821 F8W1H4 67 aa10.99□□□□□ -0.65
PABPN1-207ENST00000556821 ETDBQ3ZM63 59 aa10.98□□□□□ -0.65
PABPN1-207ENST00000556821 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
PABPN1-207ENST00000556821 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
PABPN1-207ENST00000556821 C7orf65Q6ZTY9 151 aa10.94□□□□□ -0.66
PABPN1-207ENST00000556821 CXCL6P80162 114 aa10.91□□□□□ -0.66
PABPN1-207ENST00000556821 KRTAP10-10P60014 251 aa10.9□□□□□ -0.66
PABPN1-207ENST00000556821 KRTAP9-3Q9BYQ3 159 aa10.89□□□□□ -0.67
PABPN1-207ENST00000556821 H1FX-AS1Q4G0G2 97 aa10.87□□□□□ -0.67
PABPN1-207ENST00000556821 KRTAP6-3Q3LI67 103 aa10.86□□□□□ -0.67
PABPN1-207ENST00000556821 KRTAP19-6Q3LI70 58 aa10.79□□□□□ -0.68
PABPN1-207ENST00000556821 C4orf26Q17RF5 130 aa10.78□□□□□ -0.68
PABPN1-207ENST00000556821 NEBP20929 6669 aa10.74□□□□□ -0.69
PABPN1-207ENST00000556821 TP53AIP1Q9HCN2 124 aa10.71□□□□□ -0.69
PABPN1-207ENST00000556821 ACYP1P07311 99 aa10.68□□□□□ -0.7
PABPN1-207ENST00000556821 FAM240AA0A1B0GVK7 77 aa10.67□□□□□ -0.7
PABPN1-207ENST00000556821 KRTAP3-1Q9BYR8 98 aa10.67□□□□□ -0.7
PABPN1-207ENST00000556821 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
PABPN1-207ENST00000556821 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
PABPN1-207ENST00000556821 A0A1B0GV90 55 aa10.54□□□□□ -0.72
PABPN1-207ENST00000556821 TRAV22A0A0B4J277 110 aa10.52□□□□□ -0.73
PABPN1-207ENST00000556821 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.73
PABPN1-207ENST00000556821 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
PABPN1-207ENST00000556821 C5orf47Q569G3 176 aa10.51□□□□□ -0.73
PABPN1-207ENST00000556821 S4R3F8 94 aa10.51□□□□□ -0.73
PABPN1-207ENST00000556821 LCA10Q71F78 164 aa10.47□□□□□ -0.73
PABPN1-207ENST00000556821 MUC12Q9UKN1 5478 aa10.45□□□□□ -0.74
PABPN1-207ENST00000556821 LINC00643Q86TS7 51 aa10.45□□□□□ -0.74
PABPN1-207ENST00000556821 A0A087WVE0 104 aa10.44□□□□□ -0.74
PABPN1-207ENST00000556821 LOC101927531A0A1B0GV80 90 aa10.44□□□□□ -0.74
PABPN1-207ENST00000556821 KRTAP20-1Q3LI63 56 aa10.41□□□□□ -0.74
PABPN1-207ENST00000556821 UQCRQO14949 82 aa10.4□□□□□ -0.74
PABPN1-207ENST00000556821 CSAG1Q6PB30 78 aa10.4□□□□□ -0.74
PABPN1-207ENST00000556821 H0Y9P7 68 aa10.37□□□□□ -0.75
PABPN1-207ENST00000556821 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms