RNA–Protein interactions for RNA: ENST00000550705.1

CNOT2-226, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-226ENST00000550705 COL6A5A8TX70 2615 aa1.49□□□□□ -2.17
CNOT2-226ENST00000550705 NAV2Q8IVL1 2488 aa1.48□□□□□ -2.17
CNOT2-226ENST00000550705 CCDC168Q8NDH2 2452 aa1.48□□□□□ -2.17
CNOT2-226ENST00000550705 TNRC18O15417 2968 aaPredicted RBP1.47□□□□□ -2.17
CNOT2-226ENST00000550705 CEP350Q5VT06 3117 aa1.47□□□□□ -2.17
CNOT2-226ENST00000550705 EP300Q09472 2414 aaPredicted RBP1.47□□□□□ -2.17
CNOT2-226ENST00000550705 MAP1AP78559 2803 aaPredicted RBP1.46□□□□□ -2.18
CNOT2-226ENST00000550705 DMBT1Q9UGM3 2413 aaPredicted RBP1.46□□□□□ -2.18
CNOT2-226ENST00000550705 SETD2Q9BYW2 2564 aaPredicted RBP1.46□□□□□ -2.18
CNOT2-226ENST00000550705 HTN3P15516 51 aa1.46□□□□□ -2.18
CNOT2-226ENST00000550705 AKAP13Q12802 2813 aa1.45□□□□□ -2.18
CNOT2-226ENST00000550705 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
CNOT2-226ENST00000550705 FAM186AA6NE01 2351 aa1.44□□□□□ -2.18
CNOT2-226ENST00000550705 ZNF292O60281 2723 aa1.44□□□□□ -2.18
CNOT2-226ENST00000550705 U3KQA8 63 aa1.44□□□□□ -2.18
CNOT2-226ENST00000550705 RIF1Q5UIP0 2472 aaKnown RBP1.44□□□□□ -2.18
CNOT2-226ENST00000550705 TTC28Q96AY4 2481 aa1.43□□□□□ -2.18
CNOT2-226ENST00000550705 M0R2T5 61 aa1.43□□□□□ -2.18
CNOT2-226ENST00000550705 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
CNOT2-226ENST00000550705 ITPR1Q14643 2758 aa1.42□□□□□ -2.18
CNOT2-226ENST00000550705 COL6A3P12111 3177 aa1.42□□□□□ -2.18
CNOT2-226ENST00000550705 NBEAQ8NFP9 2946 aa1.42□□□□□ -2.18
CNOT2-226ENST00000550705 BDP1A6H8Y1 2624 aa1.41□□□□□ -2.18
CNOT2-226ENST00000550705 USP24Q9UPU5 2620 aa1.41□□□□□ -2.18
CNOT2-226ENST00000550705 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
CNOT2-226ENST00000550705 LRRK2Q5S007 2527 aa1.41□□□□□ -2.18
CNOT2-226ENST00000550705 FRYLO94915 3013 aa1.41□□□□□ -2.18
CNOT2-226ENST00000550705 CELSR1Q9NYQ6 3014 aa1.4□□□□□ -2.18
CNOT2-226ENST00000550705 EPG5Q9HCE0 2579 aa1.4□□□□□ -2.19
CNOT2-226ENST00000550705 USP9YO00507 2555 aaPredicted RBP1.4□□□□□ -2.19
CNOT2-226ENST00000550705 SRCAPQ6ZRS2 3230 aa1.4□□□□□ -2.19
CNOT2-226ENST00000550705 POLQO75417 2590 aa1.39□□□□□ -2.19
CNOT2-226ENST00000550705 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
CNOT2-226ENST00000550705 ITPR3Q14573 2671 aa1.38□□□□□ -2.19
CNOT2-226ENST00000550705 NIPBLQ6KC79 2804 aaeCLIP1.38□□□□□ -2.19
CNOT2-226ENST00000550705 CACNA1AO00555 2505 aa1.37□□□□□ -2.19
CNOT2-226ENST00000550705 SONP18583 2426 aaKnown RBP1.37□□□□□ -2.19
CNOT2-226ENST00000550705 HELZ2Q9BYK8 2649 aaKnown RBP1.37□□□□□ -2.19
CNOT2-226ENST00000550705 ZZEF1O43149 2961 aa1.36□□□□□ -2.19
CNOT2-226ENST00000550705 PRUNE2Q8WUY3 3088 aa1.36□□□□□ -2.19
CNOT2-226ENST00000550705 SPG11Q96JI7 2443 aa1.36□□□□□ -2.19
CNOT2-226ENST00000550705 ATRQ13535 2644 aa1.35□□□□□ -2.19
CNOT2-226ENST00000550705 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
CNOT2-226ENST00000550705 LRBAP50851 2863 aa1.35□□□□□ -2.19
CNOT2-226ENST00000550705 NF1P21359 2839 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 TENM4Q6N022 2769 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 DEFB4AO15263 64 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.19
CNOT2-226ENST00000550705 CHD9Q3L8U1 2897 aa1.34□□□□□ -2.2
CNOT2-226ENST00000550705 APCP25054 2843 aa1.33□□□□□ -2.2
CNOT2-226ENST00000550705 TRIOO75962 3097 aa1.33□□□□□ -2.2
CNOT2-226ENST00000550705 UTP20O75691 2785 aaKnown RBP1.32□□□□□ -2.2
CNOT2-226ENST00000550705 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
CNOT2-226ENST00000550705 CFAP46Q8IYW2 2715 aa1.32□□□□□ -2.2
CNOT2-226ENST00000550705 VPS13AQ96RL7 3174 aa1.32□□□□□ -2.2
CNOT2-226ENST00000550705 ACANP16112 2415 aa1.31□□□□□ -2.2
CNOT2-226ENST00000550705 CFAP54Q96N23 3096 aa1.31□□□□□ -2.2
CNOT2-226ENST00000550705 RANBP2P49792 3224 aaKnown RBP1.31□□□□□ -2.2
CNOT2-226ENST00000550705 SMR3AQ99954 134 aa1.31□□□□□ -2.2
CNOT2-226ENST00000550705 PIEZO1Q92508 2521 aa1.3□□□□□ -2.2
CNOT2-226ENST00000550705 BOD1L1Q8NFC6 3051 aa1.3□□□□□ -2.2
CNOT2-226ENST00000550705 FRYQ5TBA9 3013 aa1.3□□□□□ -2.2
CNOT2-226ENST00000550705 HTTP42858 3142 aa1.3□□□□□ -2.2
CNOT2-226ENST00000550705 FLNCQ14315 2725 aa1.3□□□□□ -2.2
CNOT2-226ENST00000550705 CENPEQ02224 2701 aa1.29□□□□□ -2.2
CNOT2-226ENST00000550705 TGP01266 2768 aa1.29□□□□□ -2.2
CNOT2-226ENST00000550705 COL7A1Q02388 2944 aa1.29□□□□□ -2.2
CNOT2-226ENST00000550705 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
CNOT2-226ENST00000550705 TLN1Q9Y490 2541 aaKnown RBP1.28□□□□□ -2.2
CNOT2-226ENST00000550705 MTORP42345 2549 aa1.27□□□□□ -2.21
CNOT2-226ENST00000550705 GCN1Q92616 2671 aaKnown RBP1.27□□□□□ -2.21
CNOT2-226ENST00000550705 CHD8Q9HCK8 2581 aa1.27□□□□□ -2.21
CNOT2-226ENST00000550705 SETXQ7Z333 2677 aaKnown RBP1.26□□□□□ -2.21
CNOT2-226ENST00000550705 CFAP47Q6ZTR5 3102 aa1.26□□□□□ -2.21
CNOT2-226ENST00000550705 DNAH12Q6ZR08 3092 aa1.26□□□□□ -2.21
CNOT2-226ENST00000550705 NSD1Q96L73 2696 aaPredicted RBP1.25□□□□□ -2.21
CNOT2-226ENST00000550705 DCHS2Q6V1P9 2916 aa1.25□□□□□ -2.21
CNOT2-226ENST00000550705 ATMQ13315 3056 aa1.25□□□□□ -2.21
CNOT2-226ENST00000550705 GOLGB1Q14789 3259 aaKnown RBP1.25□□□□□ -2.21
CNOT2-226ENST00000550705 USP9XQ93008 2570 aaPredicted RBP1.24□□□□□ -2.21
CNOT2-226ENST00000550705 ZFHX4Q86UP3 3567 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 AKAP9Q99996 3911 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 ZFYVE26Q68DK2 2539 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 PDZD2O15018 2839 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 COL12A1Q99715 3063 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
CNOT2-226ENST00000550705 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
CNOT2-226ENST00000550705 DMXL2Q8TDJ6 3036 aa1.23□□□□□ -2.21
CNOT2-226ENST00000550705 MKI67P46013 3256 aaKnown RBP1.23□□□□□ -2.21
CNOT2-226ENST00000550705 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
CNOT2-226ENST00000550705 WDFY4Q6ZS81 3184 aa1.22□□□□□ -2.21
CNOT2-226ENST00000550705 C5orf42Q9H799 3197 aa1.22□□□□□ -2.21
CNOT2-226ENST00000550705 DMXL1Q9Y485 3027 aa1.22□□□□□ -2.21
CNOT2-226ENST00000550705 KALRNO60229 2985 aa1.21□□□□□ -2.22
CNOT2-226ENST00000550705 TEX15Q9BXT5 2789 aa1.21□□□□□ -2.22
CNOT2-226ENST00000550705 UTRNP46939 3433 aa1.2□□□□□ -2.22
CNOT2-226ENST00000550705 SZT2Q5T011 3432 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms