RNA–Protein interactions for RNA: ENST00000550705.1

CNOT2-226, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-226ENST00000550705 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
CNOT2-226ENST00000550705 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
CNOT2-226ENST00000550705 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
CNOT2-226ENST00000550705 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
CNOT2-226ENST00000550705 FOXD1Q16676 465 aa20.42■□□□□ 0.86
CNOT2-226ENST00000550705 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
CNOT2-226ENST00000550705 MSH5O43196 834 aa19.46■□□□□ 0.71
CNOT2-226ENST00000550705 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
CNOT2-226ENST00000550705 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
CNOT2-226ENST00000550705 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
CNOT2-226ENST00000550705 ADRA2BP18089 450 aa18.48■□□□□ 0.55
CNOT2-226ENST00000550705 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
CNOT2-226ENST00000550705 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
CNOT2-226ENST00000550705 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
CNOT2-226ENST00000550705 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
CNOT2-226ENST00000550705 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
CNOT2-226ENST00000550705 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
CNOT2-226ENST00000550705 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
CNOT2-226ENST00000550705 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
CNOT2-226ENST00000550705 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
CNOT2-226ENST00000550705 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
CNOT2-226ENST00000550705 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
CNOT2-226ENST00000550705 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
CNOT2-226ENST00000550705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■□□□ 11.9
CNOT2-226ENST00000550705 POTEHQ6S545 545 aa15.61■□□□□ 0.09
CNOT2-226ENST00000550705 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
CNOT2-226ENST00000550705 KCNA4P22459 653 aa15.24■□□□□ 0.03
CNOT2-226ENST00000550705 CAPN15O75808 1086 aa15.21■□□□□ 0.03
CNOT2-226ENST00000550705 DSG3P32926 999 aa15.2■□□□□ 0.02
CNOT2-226ENST00000550705 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
CNOT2-226ENST00000550705 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
CNOT2-226ENST00000550705 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
CNOT2-226ENST00000550705 APLP2Q06481 763 aa14.81□□□□□ -0.04
CNOT2-226ENST00000550705 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
CNOT2-226ENST00000550705 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
CNOT2-226ENST00000550705 ABCB7O75027 752 aa14.76□□□□□ -0.05
CNOT2-226ENST00000550705 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
CNOT2-226ENST00000550705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
CNOT2-226ENST00000550705 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
CNOT2-226ENST00000550705 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
CNOT2-226ENST00000550705 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
CNOT2-226ENST00000550705 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
CNOT2-226ENST00000550705 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
CNOT2-226ENST00000550705 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
CNOT2-226ENST00000550705 POLA2Q14181 598 aa14.21□□□□□ -0.13
CNOT2-226ENST00000550705 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
CNOT2-226ENST00000550705 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
CNOT2-226ENST00000550705 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
CNOT2-226ENST00000550705 PIP4P2Q8N4L2 257 aa14□□□□□ -0.17
CNOT2-226ENST00000550705 HAX1O00165 279 aa13.98□□□□□ -0.17
CNOT2-226ENST00000550705 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
CNOT2-226ENST00000550705 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-226ENST00000550705 ZBTB22O15209 634 aa13.93□□□□□ -0.18
CNOT2-226ENST00000550705 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
CNOT2-226ENST00000550705 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
CNOT2-226ENST00000550705 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
CNOT2-226ENST00000550705 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
CNOT2-226ENST00000550705 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
CNOT2-226ENST00000550705 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
CNOT2-226ENST00000550705 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
CNOT2-226ENST00000550705 EVX2Q03828 476 aa13.63□□□□□ -0.23
CNOT2-226ENST00000550705 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
CNOT2-226ENST00000550705 LHX8Q68G74 356 aa13.43□□□□□ -0.26
CNOT2-226ENST00000550705 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
CNOT2-226ENST00000550705 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
CNOT2-226ENST00000550705 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
CNOT2-226ENST00000550705 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
CNOT2-226ENST00000550705 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-226ENST00000550705 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
CNOT2-226ENST00000550705 GABBR2O75899 941 aa13.36□□□□□ -0.27
CNOT2-226ENST00000550705 FBLN2P98095 1184 aa13.32□□□□□ -0.28
CNOT2-226ENST00000550705 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
CNOT2-226ENST00000550705 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CNOT2-226ENST00000550705 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
CNOT2-226ENST00000550705 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
CNOT2-226ENST00000550705 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
CNOT2-226ENST00000550705 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
CNOT2-226ENST00000550705 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
CNOT2-226ENST00000550705 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
CNOT2-226ENST00000550705 CLCN6P51797 869 aa12.99□□□□□ -0.33
CNOT2-226ENST00000550705 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
CNOT2-226ENST00000550705 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
CNOT2-226ENST00000550705 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-226ENST00000550705 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
CNOT2-226ENST00000550705 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
CNOT2-226ENST00000550705 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
CNOT2-226ENST00000550705 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
CNOT2-226ENST00000550705 POTEMA6NI47 508 aa12.68□□□□□ -0.38
CNOT2-226ENST00000550705 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
CNOT2-226ENST00000550705 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-226ENST00000550705 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
CNOT2-226ENST00000550705 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
CNOT2-226ENST00000550705 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
CNOT2-226ENST00000550705 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
CNOT2-226ENST00000550705 FKBP8Q14318 412 aa12.54□□□□□ -0.4
CNOT2-226ENST00000550705 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
CNOT2-226ENST00000550705 PROM2Q8N271 834 aa12.45□□□□□ -0.42
CNOT2-226ENST00000550705 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
CNOT2-226ENST00000550705 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
CNOT2-226ENST00000550705 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms