RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 ATMQ13315 3056 aa4.6□□□□□ -1.67
PPFIA2-216ENST00000549396 PDZD2O15018 2839 aa4.6□□□□□ -1.67
PPFIA2-216ENST00000549396 FRYQ5TBA9 3013 aa4.59□□□□□ -1.67
PPFIA2-216ENST00000549396 UNC80Q8N2C7 3258 aa4.58□□□□□ -1.68
PPFIA2-216ENST00000549396 COL12A1Q99715 3063 aa4.57□□□□□ -1.68
PPFIA2-216ENST00000549396 CFAP54Q96N23 3096 aa4.56□□□□□ -1.68
PPFIA2-216ENST00000549396 FLG2Q5D862 2391 aaPredicted RBP4.55□□□□□ -1.68
PPFIA2-216ENST00000549396 DMXL2Q8TDJ6 3036 aa4.55□□□□□ -1.68
PPFIA2-216ENST00000549396 TRIOO75962 3097 aa4.52□□□□□ -1.69
PPFIA2-216ENST00000549396 A0A0C4DFX4 3053 aa4.51□□□□□ -1.69
PPFIA2-216ENST00000549396 FRYLO94915 3013 aa4.51□□□□□ -1.69
PPFIA2-216ENST00000549396 P0C880 135 aa4.51□□□□□ -1.69
PPFIA2-216ENST00000549396 NBEAQ8NFP9 2946 aa4.51□□□□□ -1.69
PPFIA2-216ENST00000549396 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
PPFIA2-216ENST00000549396 VPS13AQ96RL7 3174 aa4.5□□□□□ -1.69
PPFIA2-216ENST00000549396 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
PPFIA2-216ENST00000549396 ASH1LQ9NR48 2969 aaKnown RBP4.49□□□□□ -1.69
PPFIA2-216ENST00000549396 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
PPFIA2-216ENST00000549396 ZZEF1O43149 2961 aa4.46□□□□□ -1.69
PPFIA2-216ENST00000549396 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
PPFIA2-216ENST00000549396 MXRA5Q9NR99 2828 aa4.46□□□□□ -1.7
PPFIA2-216ENST00000549396 BRCA2P51587 3418 aa4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 ADGRG4Q8IZF6 3080 aa4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 FBN2P35556 2912 aa4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 PCNTO95613 3336 aa4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 KRTAP10-4P60372 401 aaPredicted RBP4.45□□□□□ -1.7
PPFIA2-216ENST00000549396 TACC2O95359 2948 aa4.44□□□□□ -1.7
PPFIA2-216ENST00000549396 KALRNO60229 2985 aa4.43□□□□□ -1.7
PPFIA2-216ENST00000549396 ZANQ9Y493 2812 aa4.43□□□□□ -1.7
PPFIA2-216ENST00000549396 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
PPFIA2-216ENST00000549396 ANK3Q12955 4377 aaKnown RBP4.41□□□□□ -1.7
PPFIA2-216ENST00000549396 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
PPFIA2-216ENST00000549396 SZT2Q5T011 3432 aa4.41□□□□□ -1.7
PPFIA2-216ENST00000549396 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
PPFIA2-216ENST00000549396 LAMA2P24043 3122 aaKnown RBP4.39□□□□□ -1.71
PPFIA2-216ENST00000549396 DCHS2Q6V1P9 2916 aa4.38□□□□□ -1.71
PPFIA2-216ENST00000549396 DMXL1Q9Y485 3027 aa4.38□□□□□ -1.71
PPFIA2-216ENST00000549396 NF1P21359 2839 aa4.38□□□□□ -1.71
PPFIA2-216ENST00000549396 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
PPFIA2-216ENST00000549396 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
PPFIA2-216ENST00000549396 CELSR2Q9HCU4 2923 aa4.35□□□□□ -1.71
PPFIA2-216ENST00000549396 OTOGQ6ZRI0 2925 aa4.34□□□□□ -1.71
PPFIA2-216ENST00000549396 TENM3Q9P273 2699 aa4.32□□□□□ -1.72
PPFIA2-216ENST00000549396 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
PPFIA2-216ENST00000549396 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
PPFIA2-216ENST00000549396 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
PPFIA2-216ENST00000549396 COL6A3P12111 3177 aa4.31□□□□□ -1.72
PPFIA2-216ENST00000549396 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
PPFIA2-216ENST00000549396 CRYBG3Q68DQ2 2970 aa4.29□□□□□ -1.72
PPFIA2-216ENST00000549396 XIRP2A4UGR9 3374 aa4.28□□□□□ -1.72
PPFIA2-216ENST00000549396 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
PPFIA2-216ENST00000549396 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
PPFIA2-216ENST00000549396 SPTBN5Q9NRC6 3674 aaKnown RBP4.27□□□□□ -1.73
PPFIA2-216ENST00000549396 CELSR1Q9NYQ6 3014 aa4.25□□□□□ -1.73
PPFIA2-216ENST00000549396 REV3LO60673 3130 aa4.24□□□□□ -1.73
PPFIA2-216ENST00000549396 FREM2Q5SZK8 3169 aa4.2□□□□□ -1.74
PPFIA2-216ENST00000549396 VCANP13611 3396 aa4.19□□□□□ -1.74
PPFIA2-216ENST00000549396 TGP01266 2768 aa4.18□□□□□ -1.74
PPFIA2-216ENST00000549396 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
PPFIA2-216ENST00000549396 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
PPFIA2-216ENST00000549396 VWFP04275 2813 aa4.14□□□□□ -1.75
PPFIA2-216ENST00000549396 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
PPFIA2-216ENST00000549396 CELSR3Q9NYQ7 3312 aa4.14□□□□□ -1.75
PPFIA2-216ENST00000549396 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
PPFIA2-216ENST00000549396 FBN1P35555 2871 aaKnown RBP4.11□□□□□ -1.75
PPFIA2-216ENST00000549396 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
PPFIA2-216ENST00000549396 DNAH10Q8IVF4 4471 aa4.1□□□□□ -1.75
PPFIA2-216ENST00000549396 DNAH1Q9P2D7 4330 aa4.09□□□□□ -1.75
PPFIA2-216ENST00000549396 INE1O15225 51 aa4.08□□□□□ -1.76
PPFIA2-216ENST00000549396 DNAH2Q9P225 4427 aa4.08□□□□□ -1.76
PPFIA2-216ENST00000549396 DNAH14Q0VDD8 3507 aa4.05□□□□□ -1.76
PPFIA2-216ENST00000549396 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
PPFIA2-216ENST00000549396 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
PPFIA2-216ENST00000549396 LOC400499M0QZD8 3231 aa4.03□□□□□ -1.76
PPFIA2-216ENST00000549396 DNAH11Q96DT5 4516 aa4.01□□□□□ -1.77
PPFIA2-216ENST00000549396 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
PPFIA2-216ENST00000549396 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
PPFIA2-216ENST00000549396 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
PPFIA2-216ENST00000549396 CFAP47Q6ZTR5 3102 aa3.96□□□□□ -1.78
PPFIA2-216ENST00000549396 NBPF19A0A087WUL8 3843 aa3.95□□□□□ -1.78
PPFIA2-216ENST00000549396 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
PPFIA2-216ENST00000549396 MT1HP80294 61 aa3.9□□□□□ -1.79
PPFIA2-216ENST00000549396 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
PPFIA2-216ENST00000549396 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
PPFIA2-216ENST00000549396 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
PPFIA2-216ENST00000549396 SPEGQ15772 3267 aa3.88□□□□□ -1.79
PPFIA2-216ENST00000549396 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
PPFIA2-216ENST00000549396 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
PPFIA2-216ENST00000549396 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
PPFIA2-216ENST00000549396 RELNP78509 3460 aa3.82□□□□□ -1.8
PPFIA2-216ENST00000549396 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
PPFIA2-216ENST00000549396 MT2AP02795 61 aa3.81□□□□□ -1.8
PPFIA2-216ENST00000549396 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
PPFIA2-216ENST00000549396 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
PPFIA2-216ENST00000549396 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
PPFIA2-216ENST00000549396 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
PPFIA2-216ENST00000549396 DCHS1Q96JQ0 3298 aa3.78□□□□□ -1.8
PPFIA2-216ENST00000549396 HERC1Q15751 4861 aa3.78□□□□□ -1.8
PPFIA2-216ENST00000549396 BSNQ9UPA5 3926 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms