RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 IGLV9-49A0A0B4J1Y8 123 aa4.21□□□□□ -1.74
PDZRN4-204ENST00000548316 A0A087X002 238 aa4.2□□□□□ -1.74
PDZRN4-204ENST00000548316 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
PDZRN4-204ENST00000548316 TP53AIP1Q9HCN2 124 aa4.2□□□□□ -1.74
PDZRN4-204ENST00000548316 CD164Q04900 197 aa4.2□□□□□ -1.74
PDZRN4-204ENST00000548316 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
PDZRN4-204ENST00000548316 PRR4Q16378 134 aa4.19□□□□□ -1.74
PDZRN4-204ENST00000548316 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
PDZRN4-204ENST00000548316 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
PDZRN4-204ENST00000548316 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
PDZRN4-204ENST00000548316 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
PDZRN4-204ENST00000548316 DNHD1Q96M86 4753 aa4.17□□□□□ -1.74
PDZRN4-204ENST00000548316 Q5VV11 94 aa4.17□□□□□ -1.74
PDZRN4-204ENST00000548316 MEGF8Q7Z7M0 2845 aa4.17□□□□□ -1.74
PDZRN4-204ENST00000548316 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
PDZRN4-204ENST00000548316 C1orf195Q5TG92 126 aa4.16□□□□□ -1.74
PDZRN4-204ENST00000548316 Q6ZSA8 131 aa4.16□□□□□ -1.74
PDZRN4-204ENST00000548316 TGP01266 2768 aa4.16□□□□□ -1.74
PDZRN4-204ENST00000548316 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.74
PDZRN4-204ENST00000548316 COA5Q86WW8 74 aa4.15□□□□□ -1.75
PDZRN4-204ENST00000548316 V9GYY9 64 aa4.15□□□□□ -1.75
PDZRN4-204ENST00000548316 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 C1orf134Q5TEV5 83 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 IGHV6-1A0A0B4J1U7 121 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 Q5W150 140 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP10-2P60368 255 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
PDZRN4-204ENST00000548316 A8MUN3 132 aa4.13□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
PDZRN4-204ENST00000548316 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
PDZRN4-204ENST00000548316 CIRBP-AS1Q8TBR5 109 aa4.12□□□□□ -1.75
PDZRN4-204ENST00000548316 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 PSPHP1O15172 72 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 HRES1P13985 223 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 LIMD2Q9BT23 127 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 Q75L30 129 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP1-4P0C5Y4 121 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 PCOTHQ58A44 107 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
PDZRN4-204ENST00000548316 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
PDZRN4-204ENST00000548316 KRTAP10-1P60331 282 aa4.09□□□□□ -1.75
PDZRN4-204ENST00000548316 A8MU10 97 aa4.09□□□□□ -1.75
PDZRN4-204ENST00000548316 CDK2AP2O75956 126 aa4.08□□□□□ -1.76
PDZRN4-204ENST00000548316 KRTAP21-3Q3LHN1 58 aa4.08□□□□□ -1.76
PDZRN4-204ENST00000548316 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PDZRN4-204ENST00000548316 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
PDZRN4-204ENST00000548316 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
PDZRN4-204ENST00000548316 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
PDZRN4-204ENST00000548316 LCA10Q71F78 164 aa4.06□□□□□ -1.76
PDZRN4-204ENST00000548316 NDUFS5O43920 106 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 PRR26Q8N8Z3 221 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 LY6G6CO95867 125 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 IGKV2-30P06310 120 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
PDZRN4-204ENST00000548316 SEC61GP60059 68 aa4.04□□□□□ -1.76
PDZRN4-204ENST00000548316 SPINK6Q6UWN8 80 aa4.04□□□□□ -1.76
PDZRN4-204ENST00000548316 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
PDZRN4-204ENST00000548316 LINC00313P59037 77 aa4.03□□□□□ -1.76
PDZRN4-204ENST00000548316 FAM229AH3BQW9 127 aa4.02□□□□□ -1.77
PDZRN4-204ENST00000548316 CHKB-CPT1BH3BT56 60 aa4.02□□□□□ -1.77
PDZRN4-204ENST00000548316 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
PDZRN4-204ENST00000548316 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
PDZRN4-204ENST00000548316 SPAG11AQ6PDA7 123 aa4□□□□□ -1.77
PDZRN4-204ENST00000548316 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
PDZRN4-204ENST00000548316 A6NN06 94 aa3.99□□□□□ -1.77
PDZRN4-204ENST00000548316 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
PDZRN4-204ENST00000548316 ACYP2P14621 99 aa3.99□□□□□ -1.77
PDZRN4-204ENST00000548316 SPINK7P58062 85 aa3.99□□□□□ -1.77
PDZRN4-204ENST00000548316 RPS29P62273 56 aaKnown RBP3.99□□□□□ -1.77
PDZRN4-204ENST00000548316 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
PDZRN4-204ENST00000548316 ATP11AUNQ6ZP68 121 aa3.98□□□□□ -1.77
PDZRN4-204ENST00000548316 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
PDZRN4-204ENST00000548316 TNXBP22105 4242 aa3.95□□□□□ -1.78
PDZRN4-204ENST00000548316 SPINK1P00995 79 aa3.95□□□□□ -1.78
PDZRN4-204ENST00000548316 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
PDZRN4-204ENST00000548316 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
PDZRN4-204ENST00000548316 A6NED7 52 aa3.94□□□□□ -1.78
PDZRN4-204ENST00000548316 HSPG2P98160 4391 aa3.94□□□□□ -1.78
PDZRN4-204ENST00000548316 RETNLBQ9BQ08 111 aa3.93□□□□□ -1.78
PDZRN4-204ENST00000548316 FAT1Q14517 4588 aa3.93□□□□□ -1.78
PDZRN4-204ENST00000548316 RYR2Q92736 4967 aa3.92□□□□□ -1.78
PDZRN4-204ENST00000548316 PLA2G1BP04054 148 aaKnown RBP3.92□□□□□ -1.78
PDZRN4-204ENST00000548316 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
PDZRN4-204ENST00000548316 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
PDZRN4-204ENST00000548316 A8MUU9 505 aa3.9□□□□□ -1.78
PDZRN4-204ENST00000548316 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
PDZRN4-204ENST00000548316 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
PDZRN4-204ENST00000548316 C20orf166-AS1Q96NR2 134 aa3.9□□□□□ -1.79
PDZRN4-204ENST00000548316 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
PDZRN4-204ENST00000548316 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
PDZRN4-204ENST00000548316 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
PDZRN4-204ENST00000548316 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
PDZRN4-204ENST00000548316 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
PDZRN4-204ENST00000548316 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms