RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 TPRXLQ17RH7 258 aa10.43□□□□□ -0.74
BPTF-208ENST00000544778 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
BPTF-208ENST00000544778 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
BPTF-208ENST00000544778 NSD1Q96L73 2696 aaPredicted RBP10.4□□□□□ -0.74
BPTF-208ENST00000544778 COL6A3P12111 3177 aa10.37□□□□□ -0.75
BPTF-208ENST00000544778 KRTAP1-4P0C5Y4 121 aa10.37□□□□□ -0.75
BPTF-208ENST00000544778 TRANK1O15050 2925 aa10.33□□□□□ -0.76
BPTF-208ENST00000544778 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
BPTF-208ENST00000544778 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
BPTF-208ENST00000544778 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
BPTF-208ENST00000544778 DSPP15924 2871 aaKnown RBP10.28□□□□□ -0.76
BPTF-208ENST00000544778 LRBAP50851 2863 aa10.28□□□□□ -0.76
BPTF-208ENST00000544778 CHD9Q3L8U1 2897 aa10.27□□□□□ -0.77
BPTF-208ENST00000544778 DMXL2Q8TDJ6 3036 aa10.26□□□□□ -0.77
BPTF-208ENST00000544778 UTP20O75691 2785 aaKnown RBP10.26□□□□□ -0.77
BPTF-208ENST00000544778 ASH1LQ9NR48 2969 aaKnown RBP10.24□□□□□ -0.77
BPTF-208ENST00000544778 SPEGQ15772 3267 aa10.18□□□□□ -0.78
BPTF-208ENST00000544778 HIVEP1P15822 2718 aa10.18□□□□□ -0.78
BPTF-208ENST00000544778 KRTAP13-3Q3SY46 172 aa10.17□□□□□ -0.78
BPTF-208ENST00000544778 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
BPTF-208ENST00000544778 VCANP13611 3396 aa10.11□□□□□ -0.79
BPTF-208ENST00000544778 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
BPTF-208ENST00000544778 LAMA1P25391 3075 aa10.08□□□□□ -0.8
BPTF-208ENST00000544778 COL12A1Q99715 3063 aa10.06□□□□□ -0.8
BPTF-208ENST00000544778 KRTAP12-2P59991 146 aa10.04□□□□□ -0.8
BPTF-208ENST00000544778 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
BPTF-208ENST00000544778 TACC2O95359 2948 aa10□□□□□ -0.81
BPTF-208ENST00000544778 FRYLO94915 3013 aa9.98□□□□□ -0.81
BPTF-208ENST00000544778 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
BPTF-208ENST00000544778 ATMQ13315 3056 aa9.88□□□□□ -0.83
BPTF-208ENST00000544778 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
BPTF-208ENST00000544778 KRTAP13-4Q3LI77 160 aa9.84□□□□□ -0.83
BPTF-208ENST00000544778 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
BPTF-208ENST00000544778 CELSR2Q9HCU4 2923 aa9.82□□□□□ -0.84
BPTF-208ENST00000544778 ADGRG4Q8IZF6 3080 aa9.76□□□□□ -0.85
BPTF-208ENST00000544778 TENM4Q6N022 2769 aa9.73□□□□□ -0.85
BPTF-208ENST00000544778 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
BPTF-208ENST00000544778 TGP01266 2768 aa9.66□□□□□ -0.86
BPTF-208ENST00000544778 KRTAP12-1P59990 96 aa9.64□□□□□ -0.87
BPTF-208ENST00000544778 CRCT1Q9UGL9 99 aa9.64□□□□□ -0.87
BPTF-208ENST00000544778 SPTBN5Q9NRC6 3674 aaKnown RBP9.64□□□□□ -0.87
BPTF-208ENST00000544778 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
BPTF-208ENST00000544778 FLNCQ14315 2725 aa9.62□□□□□ -0.87
BPTF-208ENST00000544778 DCHS2Q6V1P9 2916 aa9.62□□□□□ -0.87
BPTF-208ENST00000544778 CELSR1Q9NYQ6 3014 aa9.6□□□□□ -0.87
BPTF-208ENST00000544778 NBEAQ8NFP9 2946 aa9.58□□□□□ -0.88
BPTF-208ENST00000544778 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
BPTF-208ENST00000544778 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
BPTF-208ENST00000544778 NF1P21359 2839 aa9.52□□□□□ -0.89
BPTF-208ENST00000544778 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
BPTF-208ENST00000544778 ZFHX4Q86UP3 3567 aa9.5□□□□□ -0.89
BPTF-208ENST00000544778 EYSQ5T1H1 3165 aa9.5□□□□□ -0.89
BPTF-208ENST00000544778 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
BPTF-208ENST00000544778 LOC400499M0QZD8 3231 aa9.48□□□□□ -0.89
BPTF-208ENST00000544778 DMXL1Q9Y485 3027 aa9.42□□□□□ -0.9
BPTF-208ENST00000544778 WDFY3Q8IZQ1 3526 aa9.4□□□□□ -0.9
BPTF-208ENST00000544778 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
BPTF-208ENST00000544778 NIPBLQ6KC79 2804 aaeCLIP9.36□□□□□ -0.919e-7■■■■□ 21.7
BPTF-208ENST00000544778 PDZD2O15018 2839 aa9.33□□□□□ -0.92
BPTF-208ENST00000544778 FBN2P35556 2912 aa9.27□□□□□ -0.93
BPTF-208ENST00000544778 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.93
BPTF-208ENST00000544778 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
BPTF-208ENST00000544778 ZANQ9Y493 2812 aa9.25□□□□□ -0.93
BPTF-208ENST00000544778 VWFP04275 2813 aa9.21□□□□□ -0.93
BPTF-208ENST00000544778 PKD1L1Q8TDX9 2849 aa9.21□□□□□ -0.94
BPTF-208ENST00000544778 KRTAP10-12P60413 245 aa9.18□□□□□ -0.94
BPTF-208ENST00000544778 INE1O15225 51 aa9.13□□□□□ -0.95
BPTF-208ENST00000544778 HRNRQ86YZ3 2850 aaPredicted RBP9.11□□□□□ -0.95
BPTF-208ENST00000544778 LAMA5O15230 3695 aa9.1□□□□□ -0.95
BPTF-208ENST00000544778 CSMD1Q96PZ7 3565 aa9.09□□□□□ -0.95
BPTF-208ENST00000544778 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
BPTF-208ENST00000544778 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.97
BPTF-208ENST00000544778 RELNP78509 3460 aa8.95□□□□□ -0.98
BPTF-208ENST00000544778 KRTAP12-3P60328 96 aa8.83□□□□□ -1
BPTF-208ENST00000544778 ZFHX3Q15911 3703 aa8.83□□□□□ -1
BPTF-208ENST00000544778 SPENQ96T58 3664 aaKnown RBP8.8□□□□□ -1
BPTF-208ENST00000544778 KRTAP10-5P60370 271 aa8.76□□□□□ -1.01
BPTF-208ENST00000544778 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
BPTF-208ENST00000544778 SMG1Q96Q15 3661 aaKnown RBP8.72□□□□□ -1.01
BPTF-208ENST00000544778 DMDP11532 3685 aa8.7□□□□□ -1.02
BPTF-208ENST00000544778 MT1HL1P0DM35 61 aa8.68□□□□□ -1.02
BPTF-208ENST00000544778 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
BPTF-208ENST00000544778 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
BPTF-208ENST00000544778 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
BPTF-208ENST00000544778 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
BPTF-208ENST00000544778 MUC3AQ02505 3323 aa8.6□□□□□ -1.03
BPTF-208ENST00000544778 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
BPTF-208ENST00000544778 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
BPTF-208ENST00000544778 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
BPTF-208ENST00000544778 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
BPTF-208ENST00000544778 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
BPTF-208ENST00000544778 SVEP1Q4LDE5 3571 aa8.44□□□□□ -1.06
BPTF-208ENST00000544778 ANK3Q12955 4377 aaKnown RBP8.41□□□□□ -1.06
BPTF-208ENST00000544778 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
BPTF-208ENST00000544778 CUBNO60494 3623 aa8.4□□□□□ -1.06
BPTF-208ENST00000544778 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
BPTF-208ENST00000544778 ALMS1Q8TCU4 4167 aa8.3□□□□□ -1.08
BPTF-208ENST00000544778 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
BPTF-208ENST00000544778 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
BPTF-208ENST00000544778 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms