RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TENM4Q6N022 2769 aa5.22□□□□□ -1.57
GABRB3-204ENST00000541819 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
GABRB3-204ENST00000541819 NBEAL2Q6ZNJ1 2754 aa5.21□□□□□ -1.58
GABRB3-204ENST00000541819 FLNCQ14315 2725 aa5.2□□□□□ -1.58
GABRB3-204ENST00000541819 UNC80Q8N2C7 3258 aa5.17□□□□□ -1.58
GABRB3-204ENST00000541819 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
GABRB3-204ENST00000541819 VPS13AQ96RL7 3174 aa5.16□□□□□ -1.58
GABRB3-204ENST00000541819 PRUNE2Q8WUY3 3088 aa5.15□□□□□ -1.58
GABRB3-204ENST00000541819 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
GABRB3-204ENST00000541819 CDH23Q9H251 3354 aa5.14□□□□□ -1.59
GABRB3-204ENST00000541819 ITPR1Q14643 2758 aa5.12□□□□□ -1.59
GABRB3-204ENST00000541819 KALRNO60229 2985 aa5.07□□□□□ -1.6
GABRB3-204ENST00000541819 UTP20O75691 2785 aaKnown RBP5.07□□□□□ -1.6
GABRB3-204ENST00000541819 XIRP2A4UGR9 3374 aa5.06□□□□□ -1.6
GABRB3-204ENST00000541819 LAMA1P25391 3075 aa5.06□□□□□ -1.6
GABRB3-204ENST00000541819 LRBAP50851 2863 aa5.05□□□□□ -1.6
GABRB3-204ENST00000541819 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
GABRB3-204ENST00000541819 HIVEP1P15822 2718 aa5.04□□□□□ -1.6
GABRB3-204ENST00000541819 ATMQ13315 3056 aa5.04□□□□□ -1.6
GABRB3-204ENST00000541819 APCP25054 2843 aa5.02□□□□□ -1.61
GABRB3-204ENST00000541819 TACC2O95359 2948 aa5.01□□□□□ -1.61
GABRB3-204ENST00000541819 ADGRG4Q8IZF6 3080 aa5.01□□□□□ -1.61
GABRB3-204ENST00000541819 NBEAQ8NFP9 2946 aa5.01□□□□□ -1.61
GABRB3-204ENST00000541819 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
GABRB3-204ENST00000541819 VCANP13611 3396 aa5□□□□□ -1.61
GABRB3-204ENST00000541819 DNAH14Q0VDD8 3507 aa4.99□□□□□ -1.61
GABRB3-204ENST00000541819 INE1O15225 51 aa4.99□□□□□ -1.61
GABRB3-204ENST00000541819 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
GABRB3-204ENST00000541819 CELSR3Q9NYQ7 3312 aa4.98□□□□□ -1.61
GABRB3-204ENST00000541819 NIPBLQ6KC79 2804 aaeCLIP4.97□□□□□ -1.61
GABRB3-204ENST00000541819 COL12A1Q99715 3063 aa4.97□□□□□ -1.61
GABRB3-204ENST00000541819 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
GABRB3-204ENST00000541819 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.62
GABRB3-204ENST00000541819 EYSQ5T1H1 3165 aa4.94□□□□□ -1.62
GABRB3-204ENST00000541819 COL6A3P12111 3177 aa4.94□□□□□ -1.62
GABRB3-204ENST00000541819 DMXL2Q8TDJ6 3036 aa4.94□□□□□ -1.62
GABRB3-204ENST00000541819 ZZEF1O43149 2961 aa4.93□□□□□ -1.62
GABRB3-204ENST00000541819 BOD1L1Q8NFC6 3051 aa4.93□□□□□ -1.62
GABRB3-204ENST00000541819 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
GABRB3-204ENST00000541819 FRYLO94915 3013 aa4.93□□□□□ -1.62
GABRB3-204ENST00000541819 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
GABRB3-204ENST00000541819 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
GABRB3-204ENST00000541819 TENM3Q9P273 2699 aa4.85□□□□□ -1.63
GABRB3-204ENST00000541819 ZANQ9Y493 2812 aa4.84□□□□□ -1.64
GABRB3-204ENST00000541819 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
GABRB3-204ENST00000541819 TENM1Q9UKZ4 2725 aa4.83□□□□□ -1.64
GABRB3-204ENST00000541819 USP34Q70CQ2 3546 aa4.82□□□□□ -1.64
GABRB3-204ENST00000541819 FREM2Q5SZK8 3169 aa4.8□□□□□ -1.64
GABRB3-204ENST00000541819 ASH1LQ9NR48 2969 aaKnown RBP4.79□□□□□ -1.64
GABRB3-204ENST00000541819 CELSR2Q9HCU4 2923 aa4.78□□□□□ -1.64
GABRB3-204ENST00000541819 DMXL1Q9Y485 3027 aa4.77□□□□□ -1.65
GABRB3-204ENST00000541819 TGP01266 2768 aa4.76□□□□□ -1.65
GABRB3-204ENST00000541819 DCHS2Q6V1P9 2916 aa4.76□□□□□ -1.65
GABRB3-204ENST00000541819 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
GABRB3-204ENST00000541819 FBN2P35556 2912 aa4.7□□□□□ -1.66
GABRB3-204ENST00000541819 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
GABRB3-204ENST00000541819 PKD1L1Q8TDX9 2849 aa4.69□□□□□ -1.66
GABRB3-204ENST00000541819 NF1P21359 2839 aa4.69□□□□□ -1.66
GABRB3-204ENST00000541819 CFAP47Q6ZTR5 3102 aa4.68□□□□□ -1.66
GABRB3-204ENST00000541819 LOC400499M0QZD8 3231 aa4.66□□□□□ -1.66
GABRB3-204ENST00000541819 MXRA5Q9NR99 2828 aa4.66□□□□□ -1.66
GABRB3-204ENST00000541819 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
GABRB3-204ENST00000541819 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
GABRB3-204ENST00000541819 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
GABRB3-204ENST00000541819 PDZD2O15018 2839 aa4.63□□□□□ -1.67
GABRB3-204ENST00000541819 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
GABRB3-204ENST00000541819 SPEGQ15772 3267 aa4.62□□□□□ -1.67
GABRB3-204ENST00000541819 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
GABRB3-204ENST00000541819 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
GABRB3-204ENST00000541819 CELSR1Q9NYQ6 3014 aa4.59□□□□□ -1.68
GABRB3-204ENST00000541819 VWFP04275 2813 aa4.57□□□□□ -1.68
GABRB3-204ENST00000541819 ANK3Q12955 4377 aaKnown RBP4.56□□□□□ -1.68
GABRB3-204ENST00000541819 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
GABRB3-204ENST00000541819 FBN3Q75N90 2809 aa4.47□□□□□ -1.69
GABRB3-204ENST00000541819 MYO15AQ9UKN7 3530 aa4.47□□□□□ -1.69
GABRB3-204ENST00000541819 SRRM2Q9UQ35 2752 aaKnown RBP4.46□□□□□ -1.7
GABRB3-204ENST00000541819 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
GABRB3-204ENST00000541819 RELNP78509 3460 aa4.45□□□□□ -1.7
GABRB3-204ENST00000541819 WDFY3Q8IZQ1 3526 aa4.44□□□□□ -1.7
GABRB3-204ENST00000541819 OTOGQ6ZRI0 2925 aa4.42□□□□□ -1.7
GABRB3-204ENST00000541819 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
GABRB3-204ENST00000541819 ASPMQ8IZT6 3477 aa4.37□□□□□ -1.71
GABRB3-204ENST00000541819 ZFHX4Q86UP3 3567 aa4.36□□□□□ -1.71
GABRB3-204ENST00000541819 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
GABRB3-204ENST00000541819 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
GABRB3-204ENST00000541819 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
GABRB3-204ENST00000541819 LAMA5O15230 3695 aa4.31□□□□□ -1.72
GABRB3-204ENST00000541819 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
GABRB3-204ENST00000541819 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
GABRB3-204ENST00000541819 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
GABRB3-204ENST00000541819 CSMD1Q96PZ7 3565 aa4.29□□□□□ -1.72
GABRB3-204ENST00000541819 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
GABRB3-204ENST00000541819 DMDP11532 3685 aa4.26□□□□□ -1.73
GABRB3-204ENST00000541819 ZFHX3Q15911 3703 aa4.24□□□□□ -1.73
GABRB3-204ENST00000541819 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
GABRB3-204ENST00000541819 BSNQ9UPA5 3926 aa4.23□□□□□ -1.73
GABRB3-204ENST00000541819 MT1HP80294 61 aa4.21□□□□□ -1.74
GABRB3-204ENST00000541819 MEGF8Q7Z7M0 2845 aa4.21□□□□□ -1.74
GABRB3-204ENST00000541819 SPENQ96T58 3664 aaKnown RBP4.16□□□□□ -1.74
GABRB3-204ENST00000541819 TRRAPQ9Y4A5 3859 aa4.16□□□□□ -1.74
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