RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 A0A1B0GVX0 72 aa13.95□□□□□ -0.18
TTC3-225ENST00000540756 SPAG11AQ6PDA7 123 aa13.94□□□□□ -0.18
TTC3-225ENST00000540756 KRTAP4-5Q9BYR2 181 aa13.94□□□□□ -0.18
TTC3-225ENST00000540756 MMP24-AS1A0A0U1RRL7 71 aa13.93□□□□□ -0.18
TTC3-225ENST00000540756 KRTAP29-1A8MX34 341 aaPredicted RBP13.93□□□□□ -0.18
TTC3-225ENST00000540756 BIRC6Q9NR09 4857 aa13.92□□□□□ -0.18
TTC3-225ENST00000540756 CCDC179H3BU77 68 aa13.91□□□□□ -0.18
TTC3-225ENST00000540756 KRTAP10-8P60410 259 aa13.91□□□□□ -0.18
TTC3-225ENST00000540756 CASC2Q6XLA1 102 aa13.9□□□□□ -0.18
TTC3-225ENST00000540756 SERP2Q8N6R1 65 aa13.9□□□□□ -0.18
TTC3-225ENST00000540756 C8orf17Q9NRJ1 99 aa13.89□□□□□ -0.19
TTC3-225ENST00000540756 RPS29P62273 56 aaKnown RBP13.88□□□□□ -0.19
TTC3-225ENST00000540756 OCR1Q9BZK8 76 aa13.86□□□□□ -0.19
TTC3-225ENST00000540756 COX7CP15954 63 aa13.85□□□□□ -0.19
TTC3-225ENST00000540756 hDV103S1A0JD37 113 aa13.84□□□□□ -0.19
TTC3-225ENST00000540756 TRAV7A0A075B6U4 112 aa13.83□□□□□ -0.2
TTC3-225ENST00000540756 DMBT1Q9UGM3 2413 aaPredicted RBP13.81□□□□□ -0.2
TTC3-225ENST00000540756 ABCA13Q86UQ4 5058 aa13.81□□□□□ -0.2
TTC3-225ENST00000540756 RETNLBQ9BQ08 111 aa13.8□□□□□ -0.2
TTC3-225ENST00000540756 UQCRQO14949 82 aa13.79□□□□□ -0.2
TTC3-225ENST00000540756 SMIM20Q8N5G0 67 aa13.78□□□□□ -0.2
TTC3-225ENST00000540756 MT1HL1P0DM35 61 aa13.78□□□□□ -0.2
TTC3-225ENST00000540756 HERC2O95714 4834 aa13.77□□□□□ -0.21
TTC3-225ENST00000540756 LINC00313P59037 77 aa13.73□□□□□ -0.21
TTC3-225ENST00000540756 CYSTM1Q9H1C7 97 aa13.71□□□□□ -0.21
TTC3-225ENST00000540756 MRPL34Q9BQ48 92 aaKnown RBP13.7□□□□□ -0.22
TTC3-225ENST00000540756 C8orf87E5RJ46 101 aa13.69□□□□□ -0.22
TTC3-225ENST00000540756 C20orf197Q8N268 126 aa13.69□□□□□ -0.22
TTC3-225ENST00000540756 TMEM254Q8TBM7 123 aa13.68□□□□□ -0.22
TTC3-225ENST00000540756 NDUFS5O43920 106 aa13.65□□□□□ -0.22
TTC3-225ENST00000540756 SNURFQ9Y675 71 aa13.64□□□□□ -0.23
TTC3-225ENST00000540756 KRTAP16-1A8MUX0 517 aa13.63□□□□□ -0.23
TTC3-225ENST00000540756 C9orf92A6NGG3 77 aa13.57□□□□□ -0.24
TTC3-225ENST00000540756 OXTP01178 125 aa13.57□□□□□ -0.24
TTC3-225ENST00000540756 C5orf47Q569G3 176 aa13.54□□□□□ -0.24
TTC3-225ENST00000540756 A0A0U1RQV1 116 aa13.53□□□□□ -0.24
TTC3-225ENST00000540756 Q8N9P0 234 aaPredicted RBP13.53□□□□□ -0.24
TTC3-225ENST00000540756 KLKP1Q107X0 134 aa13.52□□□□□ -0.25
TTC3-225ENST00000540756 TP53AIP1Q9HCN2 124 aa13.51□□□□□ -0.25
TTC3-225ENST00000540756 H0Y9P7 68 aa13.51□□□□□ -0.25
TTC3-225ENST00000540756 Q5W150 140 aa13.5□□□□□ -0.25
TTC3-225ENST00000540756 TRAV22A0A0B4J277 110 aa13.47□□□□□ -0.25
TTC3-225ENST00000540756 LINC00208Q96KT6 92 aa13.46□□□□□ -0.26
TTC3-225ENST00000540756 MP68P56378 58 aa13.44□□□□□ -0.26
TTC3-225ENST00000540756 ZCCHC13Q8WW36 166 aaKnown RBP13.44□□□□□ -0.26
TTC3-225ENST00000540756 H7BZZ5 65 aa13.41□□□□□ -0.26
TTC3-225ENST00000540756 KRTAP13-3Q3SY46 172 aa13.4□□□□□ -0.26
TTC3-225ENST00000540756 FP248Q71RG6 208 aaPredicted RBP13.38□□□□□ -0.27
TTC3-225ENST00000540756 C1orf64Q8NEQ6 169 aa13.38□□□□□ -0.27
TTC3-225ENST00000540756 IGLV7-46A0A075B6I9 117 aa13.37□□□□□ -0.27
TTC3-225ENST00000540756 PCLOQ9Y6V0 5065 aa13.35□□□□□ -0.27
TTC3-225ENST00000540756 PRR4Q16378 134 aa13.32□□□□□ -0.28
TTC3-225ENST00000540756 C20orf166-AS1Q96NR2 134 aa13.3□□□□□ -0.28
TTC3-225ENST00000540756 H3BPC8 53 aa13.3□□□□□ -0.28
TTC3-225ENST00000540756 J3QL48 77 aa13.3□□□□□ -0.28
TTC3-225ENST00000540756 A8MUU9 505 aa13.29□□□□□ -0.28
TTC3-225ENST00000540756 NDUFC1O43677 76 aa13.27□□□□□ -0.29
TTC3-225ENST00000540756 LPAP08519 4548 aa13.26□□□□□ -0.29
TTC3-225ENST00000540756 TMEM258P61165 79 aa13.23□□□□□ -0.29
TTC3-225ENST00000540756 PCOTHQ58A44 107 aa13.22□□□□□ -0.29
TTC3-225ENST00000540756 XP32Q5T750 250 aa13.18□□□□□ -0.3
TTC3-225ENST00000540756 LOC101927531A0A1B0GV80 90 aa13.17□□□□□ -0.3
TTC3-225ENST00000540756 Q75L30 129 aa13.17□□□□□ -0.3
TTC3-225ENST00000540756 CYP4F30PQ9H0H9 118 aa13.17□□□□□ -0.3
TTC3-225ENST00000540756 LRP2P98164 4655 aa13.15□□□□□ -0.3
TTC3-225ENST00000540756 FAM236DA0A1B0GTK5 79 aa13.14□□□□□ -0.31
TTC3-225ENST00000540756 FAM236CP0DP71 79 aa13.14□□□□□ -0.31
TTC3-225ENST00000540756 IGKV2-30P06310 120 aa13.13□□□□□ -0.31
TTC3-225ENST00000540756 IGKV2D-30A0A075B6S6 120 aa13.13□□□□□ -0.31
TTC3-225ENST00000540756 HERC1Q15751 4861 aa13.08□□□□□ -0.31
TTC3-225ENST00000540756 TPRXLQ17RH7 258 aa13.07□□□□□ -0.32
TTC3-225ENST00000540756 RPL37P61927 97 aaKnown RBP13.06□□□□□ -0.32
TTC3-225ENST00000540756 ATP11AUNQ6ZP68 121 aa13□□□□□ -0.33
TTC3-225ENST00000540756 HRES1P13985 223 aa12.98□□□□□ -0.33
TTC3-225ENST00000540756 SPANXA2-OT1Q8N9U9 137 aa12.98□□□□□ -0.33
TTC3-225ENST00000540756 C7orf65Q6ZTY9 151 aa12.96□□□□□ -0.33
TTC3-225ENST00000540756 ATP5EP56381 51 aaPredicted RBP12.95□□□□□ -0.34
TTC3-225ENST00000540756 SPINK7P58062 85 aa12.93□□□□□ -0.34
TTC3-225ENST00000540756 SERP1Q9Y6X1 66 aa12.83□□□□□ -0.36
TTC3-225ENST00000540756 HMCN2Q8NDA2 5059 aa12.82□□□□□ -0.36
TTC3-225ENST00000540756 C4orf26Q17RF5 130 aa12.81□□□□□ -0.36
TTC3-225ENST00000540756 RPS28P62857 69 aaKnown RBP12.78□□□□□ -0.36
TTC3-225ENST00000540756 DMAC1Q96GE9 116 aa12.72□□□□□ -0.37
TTC3-225ENST00000540756 COA5Q86WW8 74 aa12.69□□□□□ -0.38
TTC3-225ENST00000540756 KRTAP3-1Q9BYR8 98 aa12.66□□□□□ -0.38
TTC3-225ENST00000540756 ACYP2P14621 99 aa12.62□□□□□ -0.39
TTC3-225ENST00000540756 SEC61BP60468 96 aaKnown RBP12.59□□□□□ -0.39
TTC3-225ENST00000540756 MUC17Q685J3 4493 aa12.58□□□□□ -0.4
TTC3-225ENST00000540756 KRTAP4-1Q9BYQ7 146 aa12.55□□□□□ -0.4
TTC3-225ENST00000540756 COX6B2Q6YFQ2 88 aa12.54□□□□□ -0.4
TTC3-225ENST00000540756 MUC2Q02817 5179 aa12.5□□□□□ -0.41
TTC3-225ENST00000540756 A8MUN3 132 aa12.49□□□□□ -0.41
TTC3-225ENST00000540756 SMIM26A0A096LP01 95 aa12.49□□□□□ -0.41
TTC3-225ENST00000540756 CHKB-CPT1BH3BT56 60 aa12.45□□□□□ -0.42
TTC3-225ENST00000540756 MPLKIPQ8TAP9 179 aa12.44□□□□□ -0.42
TTC3-225ENST00000540756 UBR4Q5T4S7 5183 aa12.32□□□□□ -0.44
TTC3-225ENST00000540756 RBM12B-AS1Q9P1G2 102 aa12.3□□□□□ -0.44
TTC3-225ENST00000540756 Q1T7F1 81 aa12.27□□□□□ -0.45
TTC3-225ENST00000540756 H1FX-AS1Q4G0G2 97 aa12.23□□□□□ -0.45
TTC3-225ENST00000540756 LCA10Q71F78 164 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms