RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	KALRN	O60229	2985 aa		8.59	□□□□□ -1.03
NCAPD3-213	ENST00000534532	CELSR2	Q9HCU4	2923 aa		8.57	□□□□□ -1.04
NCAPD3-213	ENST00000534532	KRTAP1-4	P0C5Y4	121 aa		8.55	□□□□□ -1.04
NCAPD3-213	ENST00000534532	CDH23	Q9H251	3354 aa		8.54	□□□□□ -1.04
NCAPD3-213	ENST00000534532	XP32	Q5T750	250 aa		8.54	□□□□□ -1.04
NCAPD3-213	ENST00000534532	ZZEF1	O43149	2961 aa		8.54	□□□□□ -1.04
NCAPD3-213	ENST00000534532	EYS	Q5T1H1	3165 aa		8.53	□□□□□ -1.04
NCAPD3-213	ENST00000534532	ASH1L	Q9NR48	2969 aa	Known RBP	8.52	□□□□□ -1.05
NCAPD3-213	ENST00000534532		A8MU10	97 aa		8.51	□□□□□ -1.05
NCAPD3-213	ENST00000534532	NBEA	Q8NFP9	2946 aa		8.5	□□□□□ -1.05
NCAPD3-213	ENST00000534532	TPRXL	Q17RH7	258 aa		8.5	□□□□□ -1.05
NCAPD3-213	ENST00000534532	ADGRG4	Q8IZF6	3080 aa		8.5	□□□□□ -1.05
NCAPD3-213	ENST00000534532	DCHS2	Q6V1P9	2916 aa		8.49	□□□□□ -1.05
NCAPD3-213	ENST00000534532	TENM3	Q9P273	2699 aa		8.49	□□□□□ -1.05
NCAPD3-213	ENST00000534532	TNP1	P09430	55 aa		8.49	□□□□□ -1.05
NCAPD3-213	ENST00000534532	BOD1L1	Q8NFC6	3051 aa		8.48	□□□□□ -1.05
NCAPD3-213	ENST00000534532	CELSR3	Q9NYQ7	3312 aa		8.45	□□□□□ -1.06
NCAPD3-213	ENST00000534532		H3BS24	57 aa		8.44	□□□□□ -1.06
NCAPD3-213	ENST00000534532	TENM1	Q9UKZ4	2725 aa		8.42	□□□□□ -1.06
NCAPD3-213	ENST00000534532	FREM2	Q5SZK8	3169 aa		8.42	□□□□□ -1.06
NCAPD3-213	ENST00000534532	SZT2	Q5T011	3432 aa		8.41	□□□□□ -1.06
NCAPD3-213	ENST00000534532	ZAN	Q9Y493	2812 aa		8.38	□□□□□ -1.07
NCAPD3-213	ENST00000534532		A0A1B0GVY2	172 aa		8.37	□□□□□ -1.07
NCAPD3-213	ENST00000534532	TENM2	Q9NT68	2774 aa		8.35	□□□□□ -1.07
NCAPD3-213	ENST00000534532	NF1	P21359	2839 aa		8.35	□□□□□ -1.07
NCAPD3-213	ENST00000534532	TNRC18	O15417	2968 aa	Predicted RBP	8.34	□□□□□ -1.07
NCAPD3-213	ENST00000534532	KRTAP10-8	P60410	259 aa		8.34	□□□□□ -1.07
NCAPD3-213	ENST00000534532	KRTAP10-10	P60014	251 aa		8.31	□□□□□ -1.08
NCAPD3-213	ENST00000534532	COL6A3	P12111	3177 aa		8.3	□□□□□ -1.08
NCAPD3-213	ENST00000534532	KRTAP25-1	Q3LHN0	102 aa		8.28	□□□□□ -1.08
NCAPD3-213	ENST00000534532	KRTAP13-3	Q3SY46	172 aa		8.28	□□□□□ -1.08
NCAPD3-213	ENST00000534532	VCAN	P13611	3396 aa		8.28	□□□□□ -1.08
NCAPD3-213	ENST00000534532	CFAP47	Q6ZTR5	3102 aa		8.2	□□□□□ -1.1
NCAPD3-213	ENST00000534532	PRO2289	Q9P1D8	64 aa		8.2	□□□□□ -1.1
NCAPD3-213	ENST00000534532		A6NN06	94 aa		8.17	□□□□□ -1.1
NCAPD3-213	ENST00000534532	DMXL1	Q9Y485	3027 aa		8.16	□□□□□ -1.1
NCAPD3-213	ENST00000534532	PP632	Q6XCG6	107 aa		8.15	□□□□□ -1.1
NCAPD3-213	ENST00000534532	MXRA5	Q9NR99	2828 aa		8.15	□□□□□ -1.1
NCAPD3-213	ENST00000534532	KRTAP16-1	A8MUX0	517 aa		8.14	□□□□□ -1.11
NCAPD3-213	ENST00000534532	HRNR	Q86YZ3	2850 aa	Predicted RBP	8.12	□□□□□ -1.11
NCAPD3-213	ENST00000534532	PKD1L1	Q8TDX9	2849 aa		8.11	□□□□□ -1.11
NCAPD3-213	ENST00000534532	FBN2	P35556	2912 aa		8.09	□□□□□ -1.11
NCAPD3-213	ENST00000534532	C10orf95	Q9H7T3	257 aa		8.08	□□□□□ -1.12
NCAPD3-213	ENST00000534532	USP34	Q70CQ2	3546 aa		8.06	□□□□□ -1.12
NCAPD3-213	ENST00000534532	CELSR1	Q9NYQ6	3014 aa		7.99	□□□□□ -1.13
NCAPD3-213	ENST00000534532	DNAH14	Q0VDD8	3507 aa		7.98	□□□□□ -1.13
NCAPD3-213	ENST00000534532	SPEG	Q15772	3267 aa		7.97	□□□□□ -1.13
NCAPD3-213	ENST00000534532		P0C880	135 aa		7.91	□□□□□ -1.14
NCAPD3-213	ENST00000534532	VWF	P04275	2813 aa		7.9	□□□□□ -1.14
NCAPD3-213	ENST00000534532		H0YAA0	97 aa		7.89	□□□□□ -1.15
NCAPD3-213	ENST00000534532	NDUFAF8	A1L188	74 aa		7.88	□□□□□ -1.15
NCAPD3-213	ENST00000534532	TG	P01266	2768 aa		7.86	□□□□□ -1.15
NCAPD3-213	ENST00000534532	SPTBN5	Q9NRC6	3674 aa	Known RBP	7.85	□□□□□ -1.15
NCAPD3-213	ENST00000534532	PDZD2	O15018	2839 aa		7.84	□□□□□ -1.15
NCAPD3-213	ENST00000534532	LOC400499	M0QZD8	3231 aa		7.76	□□□□□ -1.17
NCAPD3-213	ENST00000534532	DCHS1	Q96JQ0	3298 aa		7.71	□□□□□ -1.17
NCAPD3-213	ENST00000534532	MYO15A	Q9UKN7	3530 aa		7.65	□□□□□ -1.18
NCAPD3-213	ENST00000534532	SRRM2	Q9UQ35	2752 aa	Known RBP	7.65	□□□□□ -1.19
NCAPD3-213	ENST00000534532	OTOG	Q6ZRI0	2925 aa		7.64	□□□□□ -1.19
NCAPD3-213	ENST00000534532	FBN1	P35555	2871 aa	Known RBP	7.58	□□□□□ -1.2
NCAPD3-213	ENST00000534532	FBN3	Q75N90	2809 aa		7.54	□□□□□ -1.2
NCAPD3-213	ENST00000534532	KRTAP12-2	P59991	146 aa		7.5	□□□□□ -1.21
NCAPD3-213	ENST00000534532	KRTAP13-4	Q3LI77	160 aa		7.5	□□□□□ -1.21
NCAPD3-213	ENST00000534532	RELN	P78509	3460 aa		7.49	□□□□□ -1.21
NCAPD3-213	ENST00000534532	MT1HL1	P0DM35	61 aa		7.48	□□□□□ -1.21
NCAPD3-213	ENST00000534532	NBPF19	A0A087WUL8	3843 aa		7.45	□□□□□ -1.22
NCAPD3-213	ENST00000534532	WDFY3	Q8IZQ1	3526 aa		7.43	□□□□□ -1.22
NCAPD3-213	ENST00000534532	KRTAP3-1	Q9BYR8	98 aa		7.43	□□□□□ -1.22
NCAPD3-213	ENST00000534532	KRTAP12-1	P59990	96 aa		7.41	□□□□□ -1.22
NCAPD3-213	ENST00000534532	ZFHX3	Q15911	3703 aa		7.41	□□□□□ -1.22
NCAPD3-213	ENST00000534532	KRTAP4-5	Q9BYR2	181 aa		7.29	□□□□□ -1.24
NCAPD3-213	ENST00000534532	KRTAP15-1	Q3LI76	137 aa		7.26	□□□□□ -1.25
NCAPD3-213	ENST00000534532	ANK3	Q12955	4377 aa	Known RBP	7.24	□□□□□ -1.25
NCAPD3-213	ENST00000534532	COL7A1	Q02388	2944 aa		7.23	□□□□□ -1.25
NCAPD3-213	ENST00000534532	MEGF8	Q7Z7M0	2845 aa		7.22	□□□□□ -1.25
NCAPD3-213	ENST00000534532	KRTAP10-4	P60372	401 aa	Predicted RBP	7.2	□□□□□ -1.26
NCAPD3-213	ENST00000534532	KRTAP10-6	P60371	365 aa	Predicted RBP	7.19	□□□□□ -1.26
NCAPD3-213	ENST00000534532	ZFHX4	Q86UP3	3567 aa		7.13	□□□□□ -1.27
NCAPD3-213	ENST00000534532	LAMA5	O15230	3695 aa		7.12	□□□□□ -1.27
NCAPD3-213	ENST00000534532	ASPM	Q8IZT6	3477 aa		7.1	□□□□□ -1.27
NCAPD3-213	ENST00000534532	KRTAP10-12	P60413	245 aa		7.04	□□□□□ -1.28
NCAPD3-213	ENST00000534532	DMD	P11532	3685 aa		7.02	□□□□□ -1.29
NCAPD3-213	ENST00000534532	KRTAP3-3	Q9BYR6	98 aa		6.95	□□□□□ -1.3
NCAPD3-213	ENST00000534532	TRRAP	Q9Y4A5	3859 aa		6.94	□□□□□ -1.3
NCAPD3-213	ENST00000534532	MUC3A	Q02505	3323 aa		6.93	□□□□□ -1.3
NCAPD3-213	ENST00000534532	KRTAP3-2	Q9BYR7	98 aa		6.92	□□□□□ -1.3
NCAPD3-213	ENST00000534532	CSMD2	Q7Z408	3487 aa		6.9	□□□□□ -1.31
NCAPD3-213	ENST00000534532	CRCT1	Q9UGL9	99 aa		6.89	□□□□□ -1.31
NCAPD3-213	ENST00000534532	CSMD1	Q96PZ7	3565 aa		6.86	□□□□□ -1.31
NCAPD3-213	ENST00000534532	ALMS1	Q8TCU4	4167 aa		6.84	□□□□□ -1.31
NCAPD3-213	ENST00000534532	HUWE1	Q7Z6Z7	4374 aa	Known RBP	6.84	□□□□□ -1.31
NCAPD3-213	ENST00000534532	SMG1	Q96Q15	3661 aa	Known RBP	6.81	□□□□□ -1.32
NCAPD3-213	ENST00000534532	KRTAP12-3	P60328	96 aa		6.78	□□□□□ -1.32
NCAPD3-213	ENST00000534532	KRTAP8-1	Q8IUC2	63 aa		6.69	□□□□□ -1.34
NCAPD3-213	ENST00000534532	KRTAP23-1	A1A580	65 aa		6.66	□□□□□ -1.34
NCAPD3-213	ENST00000534532	LCE3A	Q5TA76	89 aa		6.63	□□□□□ -1.35
NCAPD3-213	ENST00000534532	SPEN	Q96T58	3664 aa	Known RBP	6.62	□□□□□ -1.35
NCAPD3-213	ENST00000534532	CUBN	O60494	3623 aa		6.62	□□□□□ -1.35
NCAPD3-213	ENST00000534532	DNAH5	Q8TE73	4624 aa		6.61	□□□□□ -1.35
NCAPD3-213	ENST00000534532	LOR	P23490	312 aa	Predicted RBP	6.6	□□□□□ -1.35

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