RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 MAST4O15021 2626 aa4.23□□□□□ -1.73
CTNND1-233ENST00000532787 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
CTNND1-233ENST00000532787 HELZ2Q9BYK8 2649 aaKnown RBP4.23□□□□□ -1.73
CTNND1-233ENST00000532787 TACC2O95359 2948 aa4.23□□□□□ -1.73
CTNND1-233ENST00000532787 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
CTNND1-233ENST00000532787 MUC3AQ02505 3323 aa4.22□□□□□ -1.73
CTNND1-233ENST00000532787 KALRNO60229 2985 aa4.21□□□□□ -1.74
CTNND1-233ENST00000532787 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
CTNND1-233ENST00000532787 WDFY3Q8IZQ1 3526 aa4.2□□□□□ -1.74
CTNND1-233ENST00000532787 COL12A1Q99715 3063 aa4.2□□□□□ -1.74
CTNND1-233ENST00000532787 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
CTNND1-233ENST00000532787 DMDP11532 3685 aa4.19□□□□□ -1.74
CTNND1-233ENST00000532787 TEX15Q9BXT5 2789 aa4.18□□□□□ -1.74
CTNND1-233ENST00000532787 UNC79Q9P2D8 2635 aa4.18□□□□□ -1.74
CTNND1-233ENST00000532787 CHD6Q8TD26 2715 aa4.17□□□□□ -1.74
CTNND1-233ENST00000532787 ITPR1Q14643 2758 aa4.16□□□□□ -1.74
CTNND1-233ENST00000532787 CFAP47Q6ZTR5 3102 aa4.14□□□□□ -1.75
CTNND1-233ENST00000532787 NOTCH1P46531 2555 aa4.13□□□□□ -1.75
CTNND1-233ENST00000532787 UTP20O75691 2785 aaKnown RBP4.13□□□□□ -1.75
CTNND1-233ENST00000532787 P0C880 135 aa4.13□□□□□ -1.75
CTNND1-233ENST00000532787 ZANQ9Y493 2812 aa4.12□□□□□ -1.75
CTNND1-233ENST00000532787 GCN1Q92616 2671 aaKnown RBP4.1□□□□□ -1.75
CTNND1-233ENST00000532787 LAMA5O15230 3695 aa4.09□□□□□ -1.75
CTNND1-233ENST00000532787 APCP25054 2843 aa4.08□□□□□ -1.76
CTNND1-233ENST00000532787 UBR5O95071 2799 aaPredicted RBP4.08□□□□□ -1.76
CTNND1-233ENST00000532787 KRTAP21-3Q3LHN1 58 aa4.08□□□□□ -1.76
CTNND1-233ENST00000532787 ITPR2Q14571 2701 aa4.07□□□□□ -1.76
CTNND1-233ENST00000532787 ASPMQ8IZT6 3477 aa4.07□□□□□ -1.76
CTNND1-233ENST00000532787 DCHS2Q6V1P9 2916 aa4.07□□□□□ -1.76
CTNND1-233ENST00000532787 ZFHX4Q86UP3 3567 aa4.06□□□□□ -1.76
CTNND1-233ENST00000532787 RELNP78509 3460 aa4.05□□□□□ -1.76
CTNND1-233ENST00000532787 NBEAL2Q6ZNJ1 2754 aa4.04□□□□□ -1.76
CTNND1-233ENST00000532787 H0YAA0 97 aa4.04□□□□□ -1.76
CTNND1-233ENST00000532787 ASH1LQ9NR48 2969 aaKnown RBP4.03□□□□□ -1.76
CTNND1-233ENST00000532787 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
CTNND1-233ENST00000532787 TEP1Q99973 2627 aaKnown RBP4.03□□□□□ -1.76
CTNND1-233ENST00000532787 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
CTNND1-233ENST00000532787 XP32Q5T750 250 aa4.02□□□□□ -1.77
CTNND1-233ENST00000532787 CRYBG3Q68DQ2 2970 aa4.02□□□□□ -1.77
CTNND1-233ENST00000532787 MXRA5Q9NR99 2828 aa4.02□□□□□ -1.77
CTNND1-233ENST00000532787 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
CTNND1-233ENST00000532787 CELSR2Q9HCU4 2923 aa4□□□□□ -1.77
CTNND1-233ENST00000532787 NF1P21359 2839 aa4□□□□□ -1.77
CTNND1-233ENST00000532787 NSD1Q96L73 2696 aaPredicted RBP4□□□□□ -1.77
CTNND1-233ENST00000532787 TPRXLQ17RH7 258 aa4□□□□□ -1.77
CTNND1-233ENST00000532787 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
CTNND1-233ENST00000532787 SMG1Q96Q15 3661 aaKnown RBP3.98□□□□□ -1.77
CTNND1-233ENST00000532787 FBN2P35556 2912 aa3.97□□□□□ -1.77
CTNND1-233ENST00000532787 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
CTNND1-233ENST00000532787 HIVEP1P15822 2718 aa3.95□□□□□ -1.78
CTNND1-233ENST00000532787 NIPBLQ6KC79 2804 aaeCLIP3.94□□□□□ -1.781e-6■□□□□ 9
CTNND1-233ENST00000532787 KMT2BQ9UMN6 2715 aaPredicted RBP3.92□□□□□ -1.78
CTNND1-233ENST00000532787 BSNQ9UPA5 3926 aa3.91□□□□□ -1.78
CTNND1-233ENST00000532787 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
CTNND1-233ENST00000532787 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
CTNND1-233ENST00000532787 SPENQ96T58 3664 aaKnown RBP3.88□□□□□ -1.79
CTNND1-233ENST00000532787 TENM4Q6N022 2769 aa3.87□□□□□ -1.79
CTNND1-233ENST00000532787 CSMD1Q96PZ7 3565 aa3.86□□□□□ -1.79
CTNND1-233ENST00000532787 PDZD2O15018 2839 aa3.86□□□□□ -1.79
CTNND1-233ENST00000532787 KRTAP10-10P60014 251 aa3.85□□□□□ -1.79
CTNND1-233ENST00000532787 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
CTNND1-233ENST00000532787 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
CTNND1-233ENST00000532787 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
CTNND1-233ENST00000532787 TENM1Q9UKZ4 2725 aa3.8□□□□□ -1.8
CTNND1-233ENST00000532787 VWFP04275 2813 aa3.78□□□□□ -1.81
CTNND1-233ENST00000532787 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
CTNND1-233ENST00000532787 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
CTNND1-233ENST00000532787 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
CTNND1-233ENST00000532787 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
CTNND1-233ENST00000532787 CSMD2Q7Z408 3487 aa3.72□□□□□ -1.81
CTNND1-233ENST00000532787 INE1O15225 51 aa3.71□□□□□ -1.81
CTNND1-233ENST00000532787 ANK3Q12955 4377 aaKnown RBP3.68□□□□□ -1.82
CTNND1-233ENST00000532787 NBPF19A0A087WUL8 3843 aa3.67□□□□□ -1.82
CTNND1-233ENST00000532787 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
CTNND1-233ENST00000532787 FBN1P35555 2871 aaKnown RBP3.63□□□□□ -1.83
CTNND1-233ENST00000532787 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
CTNND1-233ENST00000532787 CUBNO60494 3623 aa3.61□□□□□ -1.83
CTNND1-233ENST00000532787 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
CTNND1-233ENST00000532787 PKD1L1Q8TDX9 2849 aa3.6□□□□□ -1.83
CTNND1-233ENST00000532787 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
CTNND1-233ENST00000532787 ZNF469Q96JG9 3925 aaPredicted RBP3.56□□□□□ -1.84
CTNND1-233ENST00000532787 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
CTNND1-233ENST00000532787 TGP01266 2768 aa3.55□□□□□ -1.84
CTNND1-233ENST00000532787 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
CTNND1-233ENST00000532787 AKAP9Q99996 3911 aa3.52□□□□□ -1.85
CTNND1-233ENST00000532787 TENM2Q9NT68 2774 aa3.51□□□□□ -1.85
CTNND1-233ENST00000532787 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
CTNND1-233ENST00000532787 KRTAP3-2Q9BYR7 98 aa3.42□□□□□ -1.86
CTNND1-233ENST00000532787 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
CTNND1-233ENST00000532787 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
CTNND1-233ENST00000532787 SRRM2Q9UQ35 2752 aaKnown RBP3.38□□□□□ -1.87
CTNND1-233ENST00000532787 MEGF8Q7Z7M0 2845 aa3.37□□□□□ -1.87
CTNND1-233ENST00000532787 HUWE1Q7Z6Z7 4374 aaKnown RBP3.37□□□□□ -1.87
CTNND1-233ENST00000532787 FBN3Q75N90 2809 aa3.34□□□□□ -1.87
CTNND1-233ENST00000532787 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
CTNND1-233ENST00000532787 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
CTNND1-233ENST00000532787 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
CTNND1-233ENST00000532787 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
CTNND1-233ENST00000532787 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
CTNND1-233ENST00000532787 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms