RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
PPP1CA-204ENST00000526510 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
PPP1CA-204ENST00000526510 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
PPP1CA-204ENST00000526510 HERC2O95714 4834 aa11.22□□□□□ -0.61
PPP1CA-204ENST00000526510 IGHV6-1A0A0B4J1U7 121 aa11.22□□□□□ -0.61
PPP1CA-204ENST00000526510 MMP24-AS1A0A0U1RRL7 71 aa11.21□□□□□ -0.61
PPP1CA-204ENST00000526510 NOTCH2NLQ7Z3S9 236 aa11.2□□□□□ -0.62
PPP1CA-204ENST00000526510 ATOX1O00244 68 aa11.2□□□□□ -0.62
PPP1CA-204ENST00000526510 WFDC13Q8IUB5 93 aa11.2□□□□□ -0.62
PPP1CA-204ENST00000526510 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
PPP1CA-204ENST00000526510 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
PPP1CA-204ENST00000526510 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
PPP1CA-204ENST00000526510 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
PPP1CA-204ENST00000526510 OXTP01178 125 aa11.15□□□□□ -0.62
PPP1CA-204ENST00000526510 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
PPP1CA-204ENST00000526510 DMBT1Q9UGM3 2413 aaPredicted RBP11.14□□□□□ -0.63
PPP1CA-204ENST00000526510 RETNLBQ9BQ08 111 aa11.13□□□□□ -0.63
PPP1CA-204ENST00000526510 hDV103S1A0JD37 113 aa11.11□□□□□ -0.63
PPP1CA-204ENST00000526510 OCR1Q9BZK8 76 aa11.09□□□□□ -0.63
PPP1CA-204ENST00000526510 C8orf87E5RJ46 101 aa11.08□□□□□ -0.64
PPP1CA-204ENST00000526510 SERP2Q8N6R1 65 aa11.07□□□□□ -0.64
PPP1CA-204ENST00000526510 LINC00313P59037 77 aa11.06□□□□□ -0.64
PPP1CA-204ENST00000526510 TRAV7A0A075B6U4 112 aa11.05□□□□□ -0.64
PPP1CA-204ENST00000526510 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
PPP1CA-204ENST00000526510 TMEM254Q8TBM7 123 aa11.04□□□□□ -0.64
PPP1CA-204ENST00000526510 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
PPP1CA-204ENST00000526510 COX7CP15954 63 aa11.02□□□□□ -0.64
PPP1CA-204ENST00000526510 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
PPP1CA-204ENST00000526510 CCDC179H3BU77 68 aa10.99□□□□□ -0.65
PPP1CA-204ENST00000526510 UQCRQO14949 82 aa10.96□□□□□ -0.65
PPP1CA-204ENST00000526510 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
PPP1CA-204ENST00000526510 NDUFS5O43920 106 aa10.92□□□□□ -0.66
PPP1CA-204ENST00000526510 FP248Q71RG6 208 aaPredicted RBP10.92□□□□□ -0.66
PPP1CA-204ENST00000526510 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
PPP1CA-204ENST00000526510 TP53AIP1Q9HCN2 124 aa10.88□□□□□ -0.67
PPP1CA-204ENST00000526510 J3QL48 77 aa10.87□□□□□ -0.67
PPP1CA-204ENST00000526510 C20orf197Q8N268 126 aa10.87□□□□□ -0.67
PPP1CA-204ENST00000526510 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
PPP1CA-204ENST00000526510 C5orf47Q569G3 176 aa10.85□□□□□ -0.67
PPP1CA-204ENST00000526510 CYSTM1Q9H1C7 97 aa10.84□□□□□ -0.67
PPP1CA-204ENST00000526510 Q5W150 140 aa10.83□□□□□ -0.68
PPP1CA-204ENST00000526510 A0A0U1RQV1 116 aa10.82□□□□□ -0.68
PPP1CA-204ENST00000526510 H0Y9P7 68 aa10.82□□□□□ -0.68
PPP1CA-204ENST00000526510 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
PPP1CA-204ENST00000526510 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
PPP1CA-204ENST00000526510 PRR4Q16378 134 aa10.81□□□□□ -0.68
PPP1CA-204ENST00000526510 KRTAP13-3Q3SY46 172 aa10.81□□□□□ -0.68
PPP1CA-204ENST00000526510 PCLOQ9Y6V0 5065 aa10.79□□□□□ -0.68
PPP1CA-204ENST00000526510 KLKP1Q107X0 134 aa10.79□□□□□ -0.68
PPP1CA-204ENST00000526510 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
PPP1CA-204ENST00000526510 A8MUU9 505 aa10.78□□□□□ -0.68
PPP1CA-204ENST00000526510 MP68P56378 58 aa10.76□□□□□ -0.69
PPP1CA-204ENST00000526510 ZCCHC13Q8WW36 166 aaKnown RBP10.76□□□□□ -0.69
PPP1CA-204ENST00000526510 LINC00208Q96KT6 92 aa10.75□□□□□ -0.69
PPP1CA-204ENST00000526510 H3BPC8 53 aa10.7□□□□□ -0.7
PPP1CA-204ENST00000526510 XP32Q5T750 250 aa10.7□□□□□ -0.7
PPP1CA-204ENST00000526510 C1orf64Q8NEQ6 169 aa10.7□□□□□ -0.7
PPP1CA-204ENST00000526510 Q75L30 129 aa10.69□□□□□ -0.7
PPP1CA-204ENST00000526510 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
PPP1CA-204ENST00000526510 H7BZZ5 65 aa10.66□□□□□ -0.7
PPP1CA-204ENST00000526510 LPAP08519 4548 aa10.63□□□□□ -0.71
PPP1CA-204ENST00000526510 RPL37P61927 97 aaKnown RBP10.61□□□□□ -0.71
PPP1CA-204ENST00000526510 NDUFC1O43677 76 aa10.6□□□□□ -0.71
PPP1CA-204ENST00000526510 LOC101927531A0A1B0GV80 90 aa10.6□□□□□ -0.71
PPP1CA-204ENST00000526510 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
PPP1CA-204ENST00000526510 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
PPP1CA-204ENST00000526510 LRP2P98164 4655 aa10.55□□□□□ -0.72
PPP1CA-204ENST00000526510 PCOTHQ58A44 107 aa10.54□□□□□ -0.72
PPP1CA-204ENST00000526510 TMEM258P61165 79 aa10.53□□□□□ -0.72
PPP1CA-204ENST00000526510 HERC1Q15751 4861 aa10.52□□□□□ -0.73
PPP1CA-204ENST00000526510 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.73
PPP1CA-204ENST00000526510 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
PPP1CA-204ENST00000526510 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.74
PPP1CA-204ENST00000526510 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
PPP1CA-204ENST00000526510 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
PPP1CA-204ENST00000526510 HRES1P13985 223 aa10.41□□□□□ -0.74
PPP1CA-204ENST00000526510 SPINK7P58062 85 aa10.41□□□□□ -0.74
PPP1CA-204ENST00000526510 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
PPP1CA-204ENST00000526510 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
PPP1CA-204ENST00000526510 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
PPP1CA-204ENST00000526510 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
PPP1CA-204ENST00000526510 C4orf26Q17RF5 130 aa10.28□□□□□ -0.76
PPP1CA-204ENST00000526510 RPS28P62857 69 aaKnown RBP10.25□□□□□ -0.77
PPP1CA-204ENST00000526510 MUC17Q685J3 4493 aa10.24□□□□□ -0.77
PPP1CA-204ENST00000526510 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
PPP1CA-204ENST00000526510 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
PPP1CA-204ENST00000526510 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
PPP1CA-204ENST00000526510 KRTAP3-1Q9BYR8 98 aa10.18□□□□□ -0.78
PPP1CA-204ENST00000526510 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
PPP1CA-204ENST00000526510 ACYP2P14621 99 aa10.12□□□□□ -0.79
PPP1CA-204ENST00000526510 COA5Q86WW8 74 aa10.12□□□□□ -0.79
PPP1CA-204ENST00000526510 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
PPP1CA-204ENST00000526510 A8MUN3 132 aa10.09□□□□□ -0.79
PPP1CA-204ENST00000526510 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
PPP1CA-204ENST00000526510 MUC2Q02817 5179 aa9.95□□□□□ -0.82
PPP1CA-204ENST00000526510 SMIM26A0A096LP01 95 aa9.93□□□□□ -0.82
PPP1CA-204ENST00000526510 CHKB-CPT1BH3BT56 60 aa9.93□□□□□ -0.82
PPP1CA-204ENST00000526510 KRTAP19-2Q3LHN2 52 aa9.92□□□□□ -0.82
PPP1CA-204ENST00000526510 UBR4Q5T4S7 5183 aa9.91□□□□□ -0.82
PPP1CA-204ENST00000526510 H1FX-AS1Q4G0G2 97 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms