RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
CTNND1-213ENST00000526357 VPS13AQ96RL7 3174 aa4.54□□□□□ -1.68
CTNND1-213ENST00000526357 KMT2BQ9UMN6 2715 aaPredicted RBP4.53□□□□□ -1.68
CTNND1-213ENST00000526357 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
CTNND1-213ENST00000526357 COL6A3P12111 3177 aa4.51□□□□□ -1.69
CTNND1-213ENST00000526357 INE1O15225 51 aa4.51□□□□□ -1.69
CTNND1-213ENST00000526357 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
CTNND1-213ENST00000526357 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
CTNND1-213ENST00000526357 LAMA1P25391 3075 aa4.48□□□□□ -1.69
CTNND1-213ENST00000526357 FLNCQ14315 2725 aa4.48□□□□□ -1.69
CTNND1-213ENST00000526357 NBEAL2Q6ZNJ1 2754 aa4.48□□□□□ -1.69
CTNND1-213ENST00000526357 UBR5O95071 2799 aaPredicted RBP4.48□□□□□ -1.69
CTNND1-213ENST00000526357 FRYQ5TBA9 3013 aa4.47□□□□□ -1.69
CTNND1-213ENST00000526357 ITPR1Q14643 2758 aa4.46□□□□□ -1.69
CTNND1-213ENST00000526357 FRYLO94915 3013 aa4.46□□□□□ -1.69
CTNND1-213ENST00000526357 HIVEP1P15822 2718 aa4.46□□□□□ -1.7
CTNND1-213ENST00000526357 ATMQ13315 3056 aa4.46□□□□□ -1.7
CTNND1-213ENST00000526357 CELSR3Q9NYQ7 3312 aa4.46□□□□□ -1.7
CTNND1-213ENST00000526357 MAP1AP78559 2803 aaPredicted RBP4.46□□□□□ -1.7
CTNND1-213ENST00000526357 UTP20O75691 2785 aaKnown RBP4.46□□□□□ -1.7
CTNND1-213ENST00000526357 DMXL2Q8TDJ6 3036 aa4.45□□□□□ -1.7
CTNND1-213ENST00000526357 EYSQ5T1H1 3165 aa4.45□□□□□ -1.7
CTNND1-213ENST00000526357 VCANP13611 3396 aa4.45□□□□□ -1.7
CTNND1-213ENST00000526357 DNAH14Q0VDD8 3507 aa4.44□□□□□ -1.7
CTNND1-213ENST00000526357 COL12A1Q99715 3063 aa4.44□□□□□ -1.7
CTNND1-213ENST00000526357 APCP25054 2843 aa4.41□□□□□ -1.7
CTNND1-213ENST00000526357 BOD1L1Q8NFC6 3051 aa4.39□□□□□ -1.71
CTNND1-213ENST00000526357 LRBAP50851 2863 aa4.39□□□□□ -1.71
CTNND1-213ENST00000526357 USP34Q70CQ2 3546 aa4.38□□□□□ -1.71
CTNND1-213ENST00000526357 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
CTNND1-213ENST00000526357 TACC2O95359 2948 aa4.37□□□□□ -1.71
CTNND1-213ENST00000526357 DMXL1Q9Y485 3027 aa4.36□□□□□ -1.71
CTNND1-213ENST00000526357 NBEAQ8NFP9 2946 aa4.35□□□□□ -1.71
CTNND1-213ENST00000526357 ADGRG4Q8IZF6 3080 aa4.34□□□□□ -1.71
CTNND1-213ENST00000526357 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
CTNND1-213ENST00000526357 TENM4Q6N022 2769 aa4.33□□□□□ -1.72
CTNND1-213ENST00000526357 KALRNO60229 2985 aa4.32□□□□□ -1.72
CTNND1-213ENST00000526357 FREM2Q5SZK8 3169 aa4.32□□□□□ -1.72
CTNND1-213ENST00000526357 REV3LO60673 3130 aa4.32□□□□□ -1.72
CTNND1-213ENST00000526357 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
CTNND1-213ENST00000526357 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
CTNND1-213ENST00000526357 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
CTNND1-213ENST00000526357 ZZEF1O43149 2961 aa4.28□□□□□ -1.72
CTNND1-213ENST00000526357 HRNRQ86YZ3 2850 aaPredicted RBP4.25□□□□□ -1.73
CTNND1-213ENST00000526357 NIPBLQ6KC79 2804 aaeCLIP4.22□□□□□ -1.731e-6■□□□□ 9
CTNND1-213ENST00000526357 CFAP47Q6ZTR5 3102 aa4.22□□□□□ -1.73
CTNND1-213ENST00000526357 SPEGQ15772 3267 aa4.2□□□□□ -1.74
CTNND1-213ENST00000526357 ZANQ9Y493 2812 aa4.19□□□□□ -1.74
CTNND1-213ENST00000526357 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
CTNND1-213ENST00000526357 CELSR2Q9HCU4 2923 aa4.17□□□□□ -1.74
CTNND1-213ENST00000526357 MYO15AQ9UKN7 3530 aa4.17□□□□□ -1.74
CTNND1-213ENST00000526357 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
CTNND1-213ENST00000526357 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
CTNND1-213ENST00000526357 DCHS2Q6V1P9 2916 aa4.15□□□□□ -1.75
CTNND1-213ENST00000526357 TGP01266 2768 aa4.14□□□□□ -1.75
CTNND1-213ENST00000526357 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
CTNND1-213ENST00000526357 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
CTNND1-213ENST00000526357 FBN2P35556 2912 aa4.11□□□□□ -1.75
CTNND1-213ENST00000526357 NF1P21359 2839 aa4.11□□□□□ -1.75
CTNND1-213ENST00000526357 PDZD2O15018 2839 aa4.09□□□□□ -1.75
CTNND1-213ENST00000526357 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
CTNND1-213ENST00000526357 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
CTNND1-213ENST00000526357 MXRA5Q9NR99 2828 aa4.06□□□□□ -1.76
CTNND1-213ENST00000526357 ANK3Q12955 4377 aaKnown RBP4.06□□□□□ -1.76
CTNND1-213ENST00000526357 TENM2Q9NT68 2774 aa4.06□□□□□ -1.76
CTNND1-213ENST00000526357 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
CTNND1-213ENST00000526357 RELNP78509 3460 aa4.05□□□□□ -1.76
CTNND1-213ENST00000526357 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
CTNND1-213ENST00000526357 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
CTNND1-213ENST00000526357 MT1HL1P0DM35 61 aa4.04□□□□□ -1.76
CTNND1-213ENST00000526357 TENM3Q9P273 2699 aa4.03□□□□□ -1.76
CTNND1-213ENST00000526357 ASPMQ8IZT6 3477 aa4.03□□□□□ -1.77
CTNND1-213ENST00000526357 CELSR1Q9NYQ6 3014 aa4□□□□□ -1.77
CTNND1-213ENST00000526357 TENM1Q9UKZ4 2725 aa4□□□□□ -1.77
CTNND1-213ENST00000526357 LAMA5O15230 3695 aa3.99□□□□□ -1.77
CTNND1-213ENST00000526357 WDFY3Q8IZQ1 3526 aa3.98□□□□□ -1.77
CTNND1-213ENST00000526357 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
CTNND1-213ENST00000526357 OTOGQ6ZRI0 2925 aa3.97□□□□□ -1.77
CTNND1-213ENST00000526357 DMDP11532 3685 aa3.97□□□□□ -1.77
CTNND1-213ENST00000526357 DCHS1Q96JQ0 3298 aa3.95□□□□□ -1.78
CTNND1-213ENST00000526357 HUWE1Q7Z6Z7 4374 aaKnown RBP3.9□□□□□ -1.79
CTNND1-213ENST00000526357 ZFHX4Q86UP3 3567 aa3.89□□□□□ -1.79
CTNND1-213ENST00000526357 MUC3AQ02505 3323 aa3.87□□□□□ -1.79
CTNND1-213ENST00000526357 FBN1P35555 2871 aaKnown RBP3.86□□□□□ -1.79
CTNND1-213ENST00000526357 ZFHX3Q15911 3703 aa3.86□□□□□ -1.79
CTNND1-213ENST00000526357 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
CTNND1-213ENST00000526357 LORP23490 312 aaPredicted RBP3.83□□□□□ -1.8
CTNND1-213ENST00000526357 VWFP04275 2813 aa3.82□□□□□ -1.8
CTNND1-213ENST00000526357 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
CTNND1-213ENST00000526357 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
CTNND1-213ENST00000526357 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
CTNND1-213ENST00000526357 CSMD1Q96PZ7 3565 aa3.78□□□□□ -1.8
CTNND1-213ENST00000526357 BSNQ9UPA5 3926 aa3.78□□□□□ -1.8
CTNND1-213ENST00000526357 SPENQ96T58 3664 aaKnown RBP3.77□□□□□ -1.81
CTNND1-213ENST00000526357 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
CTNND1-213ENST00000526357 CSMD2Q7Z408 3487 aa3.73□□□□□ -1.81
CTNND1-213ENST00000526357 TRRAPQ9Y4A5 3859 aa3.71□□□□□ -1.82
CTNND1-213ENST00000526357 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
CTNND1-213ENST00000526357 AKAP9Q99996 3911 aa3.67□□□□□ -1.82
CTNND1-213ENST00000526357 SVEP1Q4LDE5 3571 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms