RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 REV3LO60673 3130 aa3.38□□□□□ -1.87
CTNND1-212ENST00000525902 FRYLO94915 3013 aa3.38□□□□□ -1.87
CTNND1-212ENST00000525902 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
CTNND1-212ENST00000525902 KMT2BQ9UMN6 2715 aaPredicted RBP3.37□□□□□ -1.87
CTNND1-212ENST00000525902 TEP1Q99973 2627 aaKnown RBP3.36□□□□□ -1.87
CTNND1-212ENST00000525902 COL6A3P12111 3177 aa3.36□□□□□ -1.87
CTNND1-212ENST00000525902 ITPR1Q14643 2758 aa3.35□□□□□ -1.87
CTNND1-212ENST00000525902 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
CTNND1-212ENST00000525902 Q5VSD8 79 aa3.34□□□□□ -1.87
CTNND1-212ENST00000525902 MUC3AQ02505 3323 aa3.34□□□□□ -1.88
CTNND1-212ENST00000525902 MAP1AP78559 2803 aaPredicted RBP3.33□□□□□ -1.88
CTNND1-212ENST00000525902 MAST4O15021 2626 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 TACC2O95359 2948 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 USP34Q70CQ2 3546 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 MGAM2Q2M2H8 2515 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 ATMQ13315 3056 aa3.33□□□□□ -1.88
CTNND1-212ENST00000525902 BOD1L1Q8NFC6 3051 aa3.32□□□□□ -1.88
CTNND1-212ENST00000525902 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
CTNND1-212ENST00000525902 EYSQ5T1H1 3165 aa3.32□□□□□ -1.88
CTNND1-212ENST00000525902 UTP20O75691 2785 aaKnown RBP3.32□□□□□ -1.88
CTNND1-212ENST00000525902 M0R2T5 61 aa3.32□□□□□ -1.88
CTNND1-212ENST00000525902 FREM2Q5SZK8 3169 aa3.31□□□□□ -1.88
CTNND1-212ENST00000525902 XP32Q5T750 250 aa3.31□□□□□ -1.88
CTNND1-212ENST00000525902 FLNCQ14315 2725 aa3.3□□□□□ -1.88
CTNND1-212ENST00000525902 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CTNND1-212ENST00000525902 LCE2AQ5TA79 106 aaPredicted RBP3.29□□□□□ -1.88
CTNND1-212ENST00000525902 DMXL2Q8TDJ6 3036 aa3.29□□□□□ -1.88
CTNND1-212ENST00000525902 NBEAL1Q6ZS30 2694 aa3.27□□□□□ -1.89
CTNND1-212ENST00000525902 FLNBO75369 2602 aaKnown RBP3.27□□□□□ -1.89
CTNND1-212ENST00000525902 LCE2BO14633 110 aa3.26□□□□□ -1.89
CTNND1-212ENST00000525902 ITPR2Q14571 2701 aa3.26□□□□□ -1.89
CTNND1-212ENST00000525902 SPEGQ15772 3267 aa3.26□□□□□ -1.89
CTNND1-212ENST00000525902 NSD1Q96L73 2696 aaPredicted RBP3.26□□□□□ -1.89
CTNND1-212ENST00000525902 APCP25054 2843 aa3.26□□□□□ -1.89
CTNND1-212ENST00000525902 UBR5O95071 2799 aaPredicted RBP3.25□□□□□ -1.89
CTNND1-212ENST00000525902 COL12A1Q99715 3063 aa3.24□□□□□ -1.89
CTNND1-212ENST00000525902 NOTCH1P46531 2555 aa3.23□□□□□ -1.89
CTNND1-212ENST00000525902 LOC400499M0QZD8 3231 aa3.22□□□□□ -1.89
CTNND1-212ENST00000525902 NIPBLQ6KC79 2804 aaeCLIP3.22□□□□□ -1.891e-6■□□□□ 9
CTNND1-212ENST00000525902 COL6A5A8TX70 2615 aa3.21□□□□□ -1.9
CTNND1-212ENST00000525902 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
CTNND1-212ENST00000525902 ZANQ9Y493 2812 aa3.21□□□□□ -1.9
CTNND1-212ENST00000525902 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
CTNND1-212ENST00000525902 DMXL1Q9Y485 3027 aa3.2□□□□□ -1.9
CTNND1-212ENST00000525902 STAB1Q9NY15 2570 aa3.19□□□□□ -1.9
CTNND1-212ENST00000525902 KRTAP3-1Q9BYR8 98 aa3.19□□□□□ -1.9
CTNND1-212ENST00000525902 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
CTNND1-212ENST00000525902 STAB2Q8WWQ8 2551 aa3.17□□□□□ -1.9
CTNND1-212ENST00000525902 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
CTNND1-212ENST00000525902 HIVEP1P15822 2718 aa3.16□□□□□ -1.9
CTNND1-212ENST00000525902 MYO15AQ9UKN7 3530 aa3.16□□□□□ -1.9
CTNND1-212ENST00000525902 ASH1LQ9NR48 2969 aaKnown RBP3.15□□□□□ -1.9
CTNND1-212ENST00000525902 WDFY3Q8IZQ1 3526 aa3.15□□□□□ -1.91
CTNND1-212ENST00000525902 FBN2P35556 2912 aa3.14□□□□□ -1.91
CTNND1-212ENST00000525902 CFAP47Q6ZTR5 3102 aa3.13□□□□□ -1.91
CTNND1-212ENST00000525902 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
CTNND1-212ENST00000525902 DCHS2Q6V1P9 2916 aa3.12□□□□□ -1.91
CTNND1-212ENST00000525902 CELSR2Q9HCU4 2923 aa3.11□□□□□ -1.91
CTNND1-212ENST00000525902 NF1P21359 2839 aa3.1□□□□□ -1.91
CTNND1-212ENST00000525902 LORP23490 312 aaPredicted RBP3.09□□□□□ -1.91
CTNND1-212ENST00000525902 SPENQ96T58 3664 aaKnown RBP3.09□□□□□ -1.91
CTNND1-212ENST00000525902 DMDP11532 3685 aa3.09□□□□□ -1.92
CTNND1-212ENST00000525902 PDZD2O15018 2839 aa3.07□□□□□ -1.92
CTNND1-212ENST00000525902 ZFHX4Q86UP3 3567 aa3.06□□□□□ -1.92
CTNND1-212ENST00000525902 SMG1Q96Q15 3661 aaKnown RBP3.05□□□□□ -1.92
CTNND1-212ENST00000525902 DCHS1Q96JQ0 3298 aa3.05□□□□□ -1.92
CTNND1-212ENST00000525902 TENM3Q9P273 2699 aa3.04□□□□□ -1.92
CTNND1-212ENST00000525902 CRYBG3Q68DQ2 2970 aa3.04□□□□□ -1.92
CTNND1-212ENST00000525902 CSMD1Q96PZ7 3565 aa3.03□□□□□ -1.92
CTNND1-212ENST00000525902 RELNP78509 3460 aa3.03□□□□□ -1.92
CTNND1-212ENST00000525902 ANK3Q12955 4377 aaKnown RBP3.02□□□□□ -1.93
CTNND1-212ENST00000525902 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
CTNND1-212ENST00000525902 CELSR1Q9NYQ6 3014 aa3.01□□□□□ -1.93
CTNND1-212ENST00000525902 BSNQ9UPA5 3926 aa3.01□□□□□ -1.93
CTNND1-212ENST00000525902 ASPMQ8IZT6 3477 aa3.01□□□□□ -1.93
CTNND1-212ENST00000525902 TGP01266 2768 aa3□□□□□ -1.93
CTNND1-212ENST00000525902 A0A1B0GVY2 172 aa3□□□□□ -1.93
CTNND1-212ENST00000525902 LAMA5O15230 3695 aa2.98□□□□□ -1.93
CTNND1-212ENST00000525902 TENM4Q6N022 2769 aa2.96□□□□□ -1.94
CTNND1-212ENST00000525902 TENM1Q9UKZ4 2725 aa2.95□□□□□ -1.94
CTNND1-212ENST00000525902 VWFP04275 2813 aa2.92□□□□□ -1.94
CTNND1-212ENST00000525902 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.94
CTNND1-212ENST00000525902 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
CTNND1-212ENST00000525902 OTOGQ6ZRI0 2925 aa2.89□□□□□ -1.95
CTNND1-212ENST00000525902 HUWE1Q7Z6Z7 4374 aaKnown RBP2.85□□□□□ -1.95
CTNND1-212ENST00000525902 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
CTNND1-212ENST00000525902 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
CTNND1-212ENST00000525902 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
CTNND1-212ENST00000525902 PKD1L1Q8TDX9 2849 aa2.82□□□□□ -1.96
CTNND1-212ENST00000525902 TENM2Q9NT68 2774 aa2.82□□□□□ -1.96
CTNND1-212ENST00000525902 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
CTNND1-212ENST00000525902 NBPF19A0A087WUL8 3843 aa2.81□□□□□ -1.96
CTNND1-212ENST00000525902 AKAP9Q99996 3911 aa2.81□□□□□ -1.96
CTNND1-212ENST00000525902 FBN1P35555 2871 aaKnown RBP2.8□□□□□ -1.96
CTNND1-212ENST00000525902 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
CTNND1-212ENST00000525902 TRRAPQ9Y4A5 3859 aa2.78□□□□□ -1.96
CTNND1-212ENST00000525902 VPS13CQ709C8 3753 aa2.78□□□□□ -1.96
CTNND1-212ENST00000525902 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
CTNND1-212ENST00000525902 PRKDCP78527 4128 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms