RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 DNAH5Q8TE73 4624 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 MUC17Q685J3 4493 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 DNAJC13O75165 2243 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.01□□□□□ -2.41
PCM1-214ENST00000521338 ZZEF1O43149 2961 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 TCHHQ07283 1943 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 ITPR1Q14643 2758 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 ITPR3Q14573 2671 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 GCN1Q92616 2671 aaKnown RBP-0.01□□□□□ -2.41
PCM1-214ENST00000521338 BCORQ6W2J9 1755 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 C4AP0C0L4 1744 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 C4BP0C0L5 1744 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 QSER1Q2KHR3 1735 aa-0.01□□□□□ -2.41
PCM1-214ENST00000521338 NHSQ6T4R5 1651 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 CFAP43Q8NDM7 1665 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 ALS2Q96Q42 1657 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 ITSN2Q9NZM3 1697 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 PREX2Q70Z35 1606 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 THOC2Q8NI27 1593 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.02□□□□□ -2.411e-21■■■■■ 42.4
PCM1-214ENST00000521338 NFAT5O94916 1531 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 MUC2Q02817 5179 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 FANCD2Q9BXW9 1451 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 TEP1Q99973 2627 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 HECTD1Q9ULT8 2610 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 UBR4Q5T4S7 5183 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 RANBP2P49792 3224 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 ANKRD36A6QL64 1941 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 MMP24-AS1A0A0U1RRL7 71 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 LINC01546A6NGU7 62 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 SNRPGP15A8MWD9 76 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 H0YGX0 51 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 H3BNG1 76 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 MRPL33O75394 65 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 MT1AP04731 61 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 SPRR2EP22531 72 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 PLNP26678 52 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 KRTAP19-7Q3SYF9 63 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 WFDC10BQ8IUB3 73 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 SMIM2Q9BVW6 85 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 KIF20BQ96Q89 1820 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 FAM208BQ5VWN6 2430 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 HERC2O95714 4834 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 RGPD8O14715 1765 aaPredicted RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 RGPD5Q99666 1765 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 RELNP78509 3460 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 USF3Q68DE3 2245 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 UTP20O75691 2785 aaKnown RBP-0.02□□□□□ -2.41
PCM1-214ENST00000521338 DEPDC5O75140 1603 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 CCDC180Q9P1Z9 1646 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 TIAM1Q13009 1591 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 ADGRG4Q8IZF6 3080 aa-0.02□□□□□ -2.41
PCM1-214ENST00000521338 ABCA10Q8WWZ4 1543 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 MYO15AQ9UKN7 3530 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 USH2AO75445 5202 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 CELSR3Q9NYQ7 3312 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 NBEAL1Q6ZS30 2694 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 CSMD2Q7Z408 3487 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 MGAQ8IWI9 3026 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 LY75O60449 1722 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 DDX60LQ5H9U9 1706 aaKnown RBP-0.03□□□□□ -2.41
PCM1-214ENST00000521338 SETD2Q9BYW2 2564 aaPredicted RBP-0.03□□□□□ -2.41
PCM1-214ENST00000521338 C9orf92A6NGG3 77 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 A8MTW9 85 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 H0YGG7 62 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 SPRR2AP35326 72 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 POLR2KP53803 58 aaKnown RBP-0.03□□□□□ -2.41
PCM1-214ENST00000521338 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 KRTAP8-1Q8IUC2 63 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 TOMM5Q8N4H5 51 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 TMEM167BQ9NRX6 74 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 ABRACLQ9P1F3 81 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 EPPK1P58107 5090 aaKnown RBP-0.03□□□□□ -2.41
PCM1-214ENST00000521338 CROCC2H7BZ55 1655 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 C3P01024 1663 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 MAST1Q9Y2H9 1570 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 RYR1P21817 5038 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 DNAH12Q6ZR08 3092 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
PCM1-214ENST00000521338 COL14A1Q05707 1796 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 WDFY3Q8IZQ1 3526 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 EP300Q09472 2414 aaPredicted RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 GVINP1Q7Z2Y8 2422 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 TOGARAM1Q9Y4F4 1720 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 SZT2Q5T011 3432 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 CFAP54Q96N23 3096 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 LMO7Q8WWI1 1683 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 PTPRQQ9UMZ3 2332 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 URB1O60287 2271 aaKnown RBP-0.04□□□□□ -2.42
PCM1-214ENST00000521338 KIF21BO75037 1637 aa-0.04□□□□□ -2.42
PCM1-214ENST00000521338 ABCA5Q8WWZ7 1642 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms