RNA–Protein interactions for RNA: ENST00000519554.5

PCMTD1-202, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3

Gene PCMTD1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-202ENST00000519554 COL6A5A8TX70 2615 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 MGAQ8IWI9 3026 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 CHD6Q8TD26 2715 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 APELAP0DMC3 54 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 APC2O95996 2303 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 ANK2Q01484 3957 aa0.71□□□□□ -2.3
PCMTD1-202ENST00000519554 BSNQ9UPA5 3926 aa0.7□□□□□ -2.3
PCMTD1-202ENST00000519554 SMR3AQ99954 134 aa0.7□□□□□ -2.3
PCMTD1-202ENST00000519554 RHPN1-AS1Q9BWJ2 59 aa0.7□□□□□ -2.3
PCMTD1-202ENST00000519554 TENM2Q9NT68 2774 aa0.7□□□□□ -2.3
PCMTD1-202ENST00000519554 TNRC18O15417 2968 aaPredicted RBP0.69□□□□□ -2.3
PCMTD1-202ENST00000519554 HTN1P15515 57 aa0.69□□□□□ -2.3
PCMTD1-202ENST00000519554 SETD2Q9BYW2 2564 aaPredicted RBP0.69□□□□□ -2.3
PCMTD1-202ENST00000519554 CEP250Q9BV73 2442 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 APCP25054 2843 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
PCMTD1-202ENST00000519554 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 A0A096LNI7 61 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 DEFB1P60022 68 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 U3KQA8 63 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 SPTBN4Q9H254 2564 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 DCHS2Q6V1P9 2916 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 FAM186AA6NE01 2351 aa0.67□□□□□ -2.3
PCMTD1-202ENST00000519554 NF1P21359 2839 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 H3BNG1 76 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 STATHP02808 62 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 LYSTQ99698 3801 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 MAP1BP46821 2468 aaKnown RBP0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 CCDC168Q8NDH2 2452 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 FRYQ5TBA9 3013 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
PCMTD1-202ENST00000519554 USP24Q9UPU5 2620 aa0.65□□□□□ -2.31
PCMTD1-202ENST00000519554 HIVEP3Q5T1R4 2406 aa0.65□□□□□ -2.31
PCMTD1-202ENST00000519554 FLNCQ14315 2725 aa0.65□□□□□ -2.31
PCMTD1-202ENST00000519554 PRKDCP78527 4128 aaKnown RBP0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 COX14Q96I36 57 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 COL12A1Q99715 3063 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 VPS13DQ5THJ4 4388 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 MTORP42345 2549 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 NCOR2Q9Y618 2525 aa0.64□□□□□ -2.31
PCMTD1-202ENST00000519554 PTPN13Q12923 2485 aa0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 ZFHX4Q86UP3 3567 aa0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 DNAH11Q96DT5 4516 aa0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 DEFB136Q30KP8 78 aa0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 DEFB110Q30KQ9 67 aa0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
PCMTD1-202ENST00000519554 PDZD2O15018 2839 aa0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 DEFB124Q8NES8 71 aa0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 DEFB108BQ8NET1 73 aa0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 Q9Y3F1 56 aa0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 SETXQ7Z333 2677 aaKnown RBP0.62□□□□□ -2.31
PCMTD1-202ENST00000519554 NBPF19A0A087WUL8 3843 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 SACSQ9NZJ4 4579 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 LRRK2Q5S007 2527 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 GCN1Q92616 2671 aaKnown RBP0.61□□□□□ -2.31
PCMTD1-202ENST00000519554 ZZEF1O43149 2961 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 SPENQ96T58 3664 aaKnown RBP0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 VPS13BQ7Z7G8 4022 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 CFAP54Q96N23 3096 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 ITPR3Q14573 2671 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 PRM1P04553 51 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 DMXL1Q9Y485 3027 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 NBEAQ8NFP9 2946 aa0.6□□□□□ -2.31
PCMTD1-202ENST00000519554 ACANP16112 2415 aa0.59□□□□□ -2.31
PCMTD1-202ENST00000519554 TACC2O95359 2948 aa0.59□□□□□ -2.31
PCMTD1-202ENST00000519554 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.31
PCMTD1-202ENST00000519554 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
PCMTD1-202ENST00000519554 SPTBN5Q9NRC6 3674 aaKnown RBP0.59□□□□□ -2.32
PCMTD1-202ENST00000519554 NSD1Q96L73 2696 aaPredicted RBP0.59□□□□□ -2.32
PCMTD1-202ENST00000519554 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
PCMTD1-202ENST00000519554 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
PCMTD1-202ENST00000519554 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
PCMTD1-202ENST00000519554 DNAH8Q96JB1 4490 aa0.57□□□□□ -2.32
PCMTD1-202ENST00000519554 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
PCMTD1-202ENST00000519554 TNXBP22105 4242 aa0.57□□□□□ -2.32
PCMTD1-202ENST00000519554 DNAH12Q6ZR08 3092 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 SPG11Q96JI7 2443 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 ANKRD11Q6UB99 2663 aaPredicted RBP0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 DMXL2Q8TDJ6 3036 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 ANKHD1Q8IWZ3 2542 aaKnown RBP0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 DEFB133Q30KQ1 61 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 ATMQ13315 3056 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 CUBNO60494 3623 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
PCMTD1-202ENST00000519554 STAB1Q9NY15 2570 aa0.55□□□□□ -2.32
PCMTD1-202ENST00000519554 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
PCMTD1-202ENST00000519554 AKAP9Q99996 3911 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms