RNA–Protein interactions for RNA: ENST00000519554.5

PCMTD1-202, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3

Gene PCMTD1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-202ENST00000519554 AEBP2Q6ZN18 517 aaPredicted RBP36.38■■■■□ 3.41
PCMTD1-202ENST00000519554 CHIC1Q5VXU3 224 aa34.78■■■■□ 3.16
PCMTD1-202ENST00000519554 SENP3Q9H4L4 574 aaPredicted RBP30.93■■■□□ 2.54
PCMTD1-202ENST00000519554 PHF23Q9BUL5 403 aaPredicted RBP30.57■■■□□ 2.48
PCMTD1-202ENST00000519554 FOXD1Q16676 465 aa28.83■■■□□ 2.21
PCMTD1-202ENST00000519554 PLPPR3Q6T4P5 718 aa27.88■■■□□ 2.05
PCMTD1-202ENST00000519554 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
PCMTD1-202ENST00000519554 ADRA2BP18089 450 aa27.1■■□□□ 1.93
PCMTD1-202ENST00000519554 PIAS4Q8N2W9 510 aaPredicted RBP26.99■■□□□ 1.91
PCMTD1-202ENST00000519554 MSH5O43196 834 aa26.82■■□□□ 1.88
PCMTD1-202ENST00000519554 POTEDQ86YR6 584 aa25.77■■□□□ 1.72
PCMTD1-202ENST00000519554 MAPK8IP2Q13387 824 aaPredicted RBP24.81■■□□□ 1.56
PCMTD1-202ENST00000519554 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
PCMTD1-202ENST00000519554 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
PCMTD1-202ENST00000519554 PPP4R3CPQ6ZMV5 832 aa24.5■■□□□ 1.51
PCMTD1-202ENST00000519554 CNKSR2Q8WXI2 1034 aa23.96■■□□□ 1.43
PCMTD1-202ENST00000519554 HOXD11P31277 338 aaPredicted RBP23.8■■□□□ 1.4
PCMTD1-202ENST00000519554 RNF216Q9NWF9 866 aaPredicted RBP23.67■■□□□ 1.38
PCMTD1-202ENST00000519554 NCBP3Q53F19 620 aaKnown RBP23.58■■□□□ 1.37
PCMTD1-202ENST00000519554 DCAF8L1A6NGE4 600 aa23.52■■□□□ 1.36
PCMTD1-202ENST00000519554 NPM3O75607 178 aaKnown RBP23.31■■□□□ 1.32
PCMTD1-202ENST00000519554 KCNA4P22459 653 aa23.12■■□□□ 1.29
PCMTD1-202ENST00000519554 RNF39Q9H2S5 420 aa22.95■■□□□ 1.26
PCMTD1-202ENST00000519554 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
PCMTD1-202ENST00000519554 CACNB1Q02641 598 aaPredicted RBP22.85■■□□□ 1.25
PCMTD1-202ENST00000519554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.21
PCMTD1-202ENST00000519554 C1QBPQ07021 282 aaKnown RBP22.6■■□□□ 1.21
PCMTD1-202ENST00000519554 U3KPZ7 1027 aaPredicted RBP22.25■■□□□ 1.15
PCMTD1-202ENST00000519554 SLC4A2P04920 1241 aa22.21■■□□□ 1.15
PCMTD1-202ENST00000519554 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
PCMTD1-202ENST00000519554 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
PCMTD1-202ENST00000519554 CAPN15O75808 1086 aa21.74■■□□□ 1.07
PCMTD1-202ENST00000519554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
PCMTD1-202ENST00000519554 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
PCMTD1-202ENST00000519554 DSG3P32926 999 aa21.59■■□□□ 1.05
PCMTD1-202ENST00000519554 APLP2Q06481 763 aa21.56■■□□□ 1.04
PCMTD1-202ENST00000519554 MYCNP04198 464 aaPredicted RBP21.53■■□□□ 1.04
PCMTD1-202ENST00000519554 SAMD1Q6SPF0 538 aaPredicted RBP21.53■■□□□ 1.04
PCMTD1-202ENST00000519554 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
PCMTD1-202ENST00000519554 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
PCMTD1-202ENST00000519554 ZNF219Q9P2Y4 722 aaPredicted RBP21.42■■□□□ 1.02
PCMTD1-202ENST00000519554 ABCB7O75027 752 aa21.3■■□□□ 1
PCMTD1-202ENST00000519554 ZBTB22O15209 634 aa21.29■■□□□ 1
PCMTD1-202ENST00000519554 ATF5Q9Y2D1 282 aaPredicted RBP21.06■□□□□ 0.96
PCMTD1-202ENST00000519554 POLA2Q14181 598 aa20.96■□□□□ 0.95
PCMTD1-202ENST00000519554 ATXN8OSP0DMR3 200 aa20.75■□□□□ 0.91
PCMTD1-202ENST00000519554 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
PCMTD1-202ENST00000519554 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
PCMTD1-202ENST00000519554 ZBTB12Q9Y330 459 aaPredicted RBP20.52■□□□□ 0.88
PCMTD1-202ENST00000519554 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.85
PCMTD1-202ENST00000519554 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
PCMTD1-202ENST00000519554 POTEHQ6S545 545 aa20.23■□□□□ 0.83
PCMTD1-202ENST00000519554 FBLN2P98095 1184 aa20.14■□□□□ 0.81
PCMTD1-202ENST00000519554 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
PCMTD1-202ENST00000519554 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
PCMTD1-202ENST00000519554 CHRDL2Q6WN34 429 aa20.01■□□□□ 0.79
PCMTD1-202ENST00000519554 REM2Q8IYK8 340 aaPredicted RBP19.97■□□□□ 0.79
PCMTD1-202ENST00000519554 SPDYE2BA6NHP3 402 aa19.94■□□□□ 0.78
PCMTD1-202ENST00000519554 SPDYE6P0CI01 402 aa19.94■□□□□ 0.78
PCMTD1-202ENST00000519554 SPDYE2Q495Y8 402 aa19.94■□□□□ 0.78
PCMTD1-202ENST00000519554 PITPNM1O00562 1244 aa19.78■□□□□ 0.76
PCMTD1-202ENST00000519554 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
PCMTD1-202ENST00000519554 SSUH2Q9Y2M2 353 aa19.73■□□□□ 0.75
PCMTD1-202ENST00000519554 PIP4P2Q8N4L2 257 aa19.62■□□□□ 0.73
PCMTD1-202ENST00000519554 FXR2P51116 673 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCMTD1-202ENST00000519554 SPDYE1Q8NFV5 336 aaPredicted RBP19.51■□□□□ 0.71
PCMTD1-202ENST00000519554 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
PCMTD1-202ENST00000519554 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
PCMTD1-202ENST00000519554 PRKAR2AP13861 404 aaKnown RBP19.25■□□□□ 0.67
PCMTD1-202ENST00000519554 SPDYE4A6NLX3 237 aa19.24■□□□□ 0.67
PCMTD1-202ENST00000519554 PRR29P0C7W0 189 aa19.17■□□□□ 0.66
PCMTD1-202ENST00000519554 HAX1O00165 279 aa19.14■□□□□ 0.65
PCMTD1-202ENST00000519554 CHADLQ6NUI6 762 aa19.11■□□□□ 0.65
PCMTD1-202ENST00000519554 SP7Q8TDD2 431 aaPredicted RBP19.09■□□□□ 0.65
PCMTD1-202ENST00000519554 EVX2Q03828 476 aa19■□□□□ 0.63
PCMTD1-202ENST00000519554 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
PCMTD1-202ENST00000519554 C19orf67A6NJJ6 358 aa18.9■□□□□ 0.62
PCMTD1-202ENST00000519554 PROM2Q8N271 834 aa18.87■□□□□ 0.61
PCMTD1-202ENST00000519554 FARP1Q9Y4F1 1045 aaPredicted RBP18.83■□□□□ 0.6
PCMTD1-202ENST00000519554 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
PCMTD1-202ENST00000519554 CD44P16070 742 aaKnown RBP18.65■□□□□ 0.58
PCMTD1-202ENST00000519554 FKBP8Q14318 412 aa18.57■□□□□ 0.56
PCMTD1-202ENST00000519554 GABBR2O75899 941 aa18.55■□□□□ 0.56
PCMTD1-202ENST00000519554 MNX1P50219 401 aaPredicted RBP18.55■□□□□ 0.56
PCMTD1-202ENST00000519554 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
PCMTD1-202ENST00000519554 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
PCMTD1-202ENST00000519554 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
PCMTD1-202ENST00000519554 MIER1Q8N108 512 aa18.3■□□□□ 0.52
PCMTD1-202ENST00000519554 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
PCMTD1-202ENST00000519554 CLCN6P51797 869 aa18.28■□□□□ 0.52
PCMTD1-202ENST00000519554 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
PCMTD1-202ENST00000519554 PHF12Q96QT6 1004 aa18.22■□□□□ 0.51
PCMTD1-202ENST00000519554 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
PCMTD1-202ENST00000519554 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
PCMTD1-202ENST00000519554 GALR2O43603 387 aaPredicted RBP18.16■□□□□ 0.5
PCMTD1-202ENST00000519554 TSPYL2Q9H2G4 693 aaPredicted RBP18.12■□□□□ 0.49
PCMTD1-202ENST00000519554 RASEFQ8IZ41 740 aa18.07■□□□□ 0.48
PCMTD1-202ENST00000519554 DCBLD2Q96PD2 775 aa18.06■□□□□ 0.48
PCMTD1-202ENST00000519554 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
PCMTD1-202ENST00000519554 CCDC61Q9Y6R9 512 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms