RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 HIVEP1P15822 2718 aa3.83□□□□□ -1.8
CCDC30-214ENST00000514642 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CCDC30-214ENST00000514642 VPS13AQ96RL7 3174 aa3.83□□□□□ -1.8
CCDC30-214ENST00000514642 CENPEQ02224 2701 aa3.82□□□□□ -1.8
CCDC30-214ENST00000514642 FRYQ5TBA9 3013 aa3.81□□□□□ -1.8
CCDC30-214ENST00000514642 CFAP47Q6ZTR5 3102 aa3.81□□□□□ -1.8
CCDC30-214ENST00000514642 DSPP15924 2871 aaKnown RBP3.8□□□□□ -1.8
CCDC30-214ENST00000514642 REV3LO60673 3130 aa3.79□□□□□ -1.8
CCDC30-214ENST00000514642 MAP1AP78559 2803 aaPredicted RBP3.79□□□□□ -1.8
CCDC30-214ENST00000514642 NBEAL1Q6ZS30 2694 aa3.79□□□□□ -1.8
CCDC30-214ENST00000514642 TENM4Q6N022 2769 aa3.79□□□□□ -1.8
CCDC30-214ENST00000514642 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
CCDC30-214ENST00000514642 FREM2Q5SZK8 3169 aa3.77□□□□□ -1.81
CCDC30-214ENST00000514642 EYSQ5T1H1 3165 aa3.77□□□□□ -1.81
CCDC30-214ENST00000514642 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
CCDC30-214ENST00000514642 ASPMQ8IZT6 3477 aa3.76□□□□□ -1.81
CCDC30-214ENST00000514642 UBR5O95071 2799 aaPredicted RBP3.76□□□□□ -1.81
CCDC30-214ENST00000514642 UTP20O75691 2785 aaKnown RBP3.75□□□□□ -1.81
CCDC30-214ENST00000514642 MYO15AQ9UKN7 3530 aa3.74□□□□□ -1.81
CCDC30-214ENST00000514642 NBPF19A0A087WUL8 3843 aa3.74□□□□□ -1.81
CCDC30-214ENST00000514642 NOTCH1P46531 2555 aa3.73□□□□□ -1.81
CCDC30-214ENST00000514642 DMBT1Q9UGM3 2413 aaPredicted RBP3.72□□□□□ -1.81
CCDC30-214ENST00000514642 APCP25054 2843 aa3.71□□□□□ -1.82
CCDC30-214ENST00000514642 LAMA1P25391 3075 aa3.71□□□□□ -1.82
CCDC30-214ENST00000514642 ALMS1Q8TCU4 4167 aa3.7□□□□□ -1.82
CCDC30-214ENST00000514642 WDFY3Q8IZQ1 3526 aa3.69□□□□□ -1.82
CCDC30-214ENST00000514642 ITPR1Q14643 2758 aa3.68□□□□□ -1.82
CCDC30-214ENST00000514642 DCHS1Q96JQ0 3298 aa3.67□□□□□ -1.82
CCDC30-214ENST00000514642 STAB2Q8WWQ8 2551 aa3.66□□□□□ -1.82
CCDC30-214ENST00000514642 FLNCQ14315 2725 aa3.66□□□□□ -1.82
CCDC30-214ENST00000514642 LRBAP50851 2863 aa3.66□□□□□ -1.82
CCDC30-214ENST00000514642 ATMQ13315 3056 aa3.64□□□□□ -1.83
CCDC30-214ENST00000514642 P0C880 135 aa3.64□□□□□ -1.83
CCDC30-214ENST00000514642 BOD1L1Q8NFC6 3051 aa3.63□□□□□ -1.83
CCDC30-214ENST00000514642 NBEAL2Q6ZNJ1 2754 aa3.63□□□□□ -1.83
CCDC30-214ENST00000514642 H0YAA0 97 aa3.62□□□□□ -1.83
CCDC30-214ENST00000514642 FRYLO94915 3013 aa3.62□□□□□ -1.83
CCDC30-214ENST00000514642 MT1HL1P0DM35 61 aa3.61□□□□□ -1.83
CCDC30-214ENST00000514642 ANK3Q12955 4377 aaKnown RBP3.59□□□□□ -1.84
CCDC30-214ENST00000514642 KRTAP4-5Q9BYR2 181 aa3.58□□□□□ -1.84
CCDC30-214ENST00000514642 KALRNO60229 2985 aa3.58□□□□□ -1.84
CCDC30-214ENST00000514642 DMXL2Q8TDJ6 3036 aa3.57□□□□□ -1.84
CCDC30-214ENST00000514642 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
CCDC30-214ENST00000514642 COL12A1Q99715 3063 aa3.55□□□□□ -1.84
CCDC30-214ENST00000514642 ASH1LQ9NR48 2969 aaKnown RBP3.55□□□□□ -1.84
CCDC30-214ENST00000514642 TACC2O95359 2948 aa3.53□□□□□ -1.84
CCDC30-214ENST00000514642 DMXL1Q9Y485 3027 aa3.53□□□□□ -1.84
CCDC30-214ENST00000514642 LOC400499M0QZD8 3231 aa3.53□□□□□ -1.84
CCDC30-214ENST00000514642 LAMA5O15230 3695 aa3.52□□□□□ -1.85
CCDC30-214ENST00000514642 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
CCDC30-214ENST00000514642 ADGRG4Q8IZF6 3080 aa3.51□□□□□ -1.85
CCDC30-214ENST00000514642 ZFHX4Q86UP3 3567 aa3.51□□□□□ -1.85
CCDC30-214ENST00000514642 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
CCDC30-214ENST00000514642 PDZD2O15018 2839 aa3.51□□□□□ -1.85
CCDC30-214ENST00000514642 NBEAQ8NFP9 2946 aa3.5□□□□□ -1.85
CCDC30-214ENST00000514642 CSMD1Q96PZ7 3565 aa3.5□□□□□ -1.85
CCDC30-214ENST00000514642 KRTAP3-3Q9BYR6 98 aa3.49□□□□□ -1.85
CCDC30-214ENST00000514642 KRTAP3-2Q9BYR7 98 aa3.49□□□□□ -1.85
CCDC30-214ENST00000514642 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
CCDC30-214ENST00000514642 HRNRQ86YZ3 2850 aaPredicted RBP3.47□□□□□ -1.85
CCDC30-214ENST00000514642 RELNP78509 3460 aa3.46□□□□□ -1.86
CCDC30-214ENST00000514642 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
CCDC30-214ENST00000514642 ZZEF1O43149 2961 aa3.45□□□□□ -1.86
CCDC30-214ENST00000514642 NIPBLQ6KC79 2804 aaeCLIP3.45□□□□□ -1.86
CCDC30-214ENST00000514642 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
CCDC30-214ENST00000514642 DMDP11532 3685 aa3.44□□□□□ -1.86
CCDC30-214ENST00000514642 FBN2P35556 2912 aa3.41□□□□□ -1.86
CCDC30-214ENST00000514642 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
CCDC30-214ENST00000514642 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.87
CCDC30-214ENST00000514642 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
CCDC30-214ENST00000514642 TENM1Q9UKZ4 2725 aa3.39□□□□□ -1.87
CCDC30-214ENST00000514642 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
CCDC30-214ENST00000514642 SPENQ96T58 3664 aaKnown RBP3.38□□□□□ -1.87
CCDC30-214ENST00000514642 NF1P21359 2839 aa3.36□□□□□ -1.87
CCDC30-214ENST00000514642 CELSR2Q9HCU4 2923 aa3.36□□□□□ -1.87
CCDC30-214ENST00000514642 SMG1Q96Q15 3661 aaKnown RBP3.35□□□□□ -1.87
CCDC30-214ENST00000514642 DCHS2Q6V1P9 2916 aa3.34□□□□□ -1.87
CCDC30-214ENST00000514642 MXRA5Q9NR99 2828 aa3.34□□□□□ -1.88
CCDC30-214ENST00000514642 CELSR1Q9NYQ6 3014 aa3.33□□□□□ -1.88
CCDC30-214ENST00000514642 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
CCDC30-214ENST00000514642 DNAH1Q9P2D7 4330 aa3.32□□□□□ -1.88
CCDC30-214ENST00000514642 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
CCDC30-214ENST00000514642 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
CCDC30-214ENST00000514642 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
CCDC30-214ENST00000514642 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
CCDC30-214ENST00000514642 BSNQ9UPA5 3926 aa3.28□□□□□ -1.88
CCDC30-214ENST00000514642 CSMD2Q7Z408 3487 aa3.27□□□□□ -1.89
CCDC30-214ENST00000514642 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
CCDC30-214ENST00000514642 FBN1P35555 2871 aaKnown RBP3.27□□□□□ -1.89
CCDC30-214ENST00000514642 FBN3Q75N90 2809 aa3.27□□□□□ -1.89
CCDC30-214ENST00000514642 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-214ENST00000514642 PKD1L1Q8TDX9 2849 aa3.24□□□□□ -1.89
CCDC30-214ENST00000514642 MT1HP80294 61 aa3.23□□□□□ -1.89
CCDC30-214ENST00000514642 VWFP04275 2813 aa3.23□□□□□ -1.89
CCDC30-214ENST00000514642 MUC3AQ02505 3323 aa3.22□□□□□ -1.89
CCDC30-214ENST00000514642 INE1O15225 51 aa3.22□□□□□ -1.89
CCDC30-214ENST00000514642 DNAH9Q9NYC9 4486 aa3.22□□□□□ -1.89
CCDC30-214ENST00000514642 CUBNO60494 3623 aa3.19□□□□□ -1.9
CCDC30-214ENST00000514642 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
CCDC30-214ENST00000514642 TGP01266 2768 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms