RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
CCDC30-214ENST00000514642 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
CCDC30-214ENST00000514642 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
CCDC30-214ENST00000514642 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
CCDC30-214ENST00000514642 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
CCDC30-214ENST00000514642 APLP2Q06481 763 aa11.98□□□□□ -0.49
CCDC30-214ENST00000514642 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
CCDC30-214ENST00000514642 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
CCDC30-214ENST00000514642 RANGAP1P46060 587 aaPredicted RBP11.61□□□□□ -0.55
CCDC30-214ENST00000514642 ABCC9O60706 1549 aa11.61□□□□□ -0.55
CCDC30-214ENST00000514642 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
CCDC30-214ENST00000514642 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
CCDC30-214ENST00000514642 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
CCDC30-214ENST00000514642 TTBK1Q5TCY1 1321 aaPredicted RBP11.45□□□□□ -0.58
CCDC30-214ENST00000514642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
CCDC30-214ENST00000514642 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
CCDC30-214ENST00000514642 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC30-214ENST00000514642 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
CCDC30-214ENST00000514642 FBLN2P98095 1184 aa11.19□□□□□ -0.62
CCDC30-214ENST00000514642 CHIC1Q5VXU3 224 aa11.17□□□□□ -0.62
CCDC30-214ENST00000514642 PCGF6Q9BYE7 350 aa11.06□□□□□ -0.64
CCDC30-214ENST00000514642 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.64
CCDC30-214ENST00000514642 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC30-214ENST00000514642 ITGAEP38570 1179 aa10.97□□□□□ -0.65
CCDC30-214ENST00000514642 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
CCDC30-214ENST00000514642 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
CCDC30-214ENST00000514642 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
CCDC30-214ENST00000514642 ESF1Q9H501 851 aaKnown RBP10.97□□□□□ -0.65
CCDC30-214ENST00000514642 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
CCDC30-214ENST00000514642 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
CCDC30-214ENST00000514642 BCANQ96GW7 911 aa10.92□□□□□ -0.66
CCDC30-214ENST00000514642 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
CCDC30-214ENST00000514642 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
CCDC30-214ENST00000514642 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
CCDC30-214ENST00000514642 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
CCDC30-214ENST00000514642 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
CCDC30-214ENST00000514642 ERCC6Q03468 1493 aa10.78□□□□□ -0.68
CCDC30-214ENST00000514642 PLPPR3Q6T4P5 718 aa10.77□□□□□ -0.68
CCDC30-214ENST00000514642 NEFLP07196 543 aa10.75□□□□□ -0.69
CCDC30-214ENST00000514642 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
CCDC30-214ENST00000514642 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
CCDC30-214ENST00000514642 NACADO15069 1562 aa10.73□□□□□ -0.69
CCDC30-214ENST00000514642 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
CCDC30-214ENST00000514642 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
CCDC30-214ENST00000514642 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.7
CCDC30-214ENST00000514642 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
CCDC30-214ENST00000514642 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
CCDC30-214ENST00000514642 ZCCHC6Q5VYS8 1495 aaKnown RBP10.64□□□□□ -0.71
CCDC30-214ENST00000514642 CNGB1Q14028 1251 aaPredicted RBP10.62□□□□□ -0.71
CCDC30-214ENST00000514642 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
CCDC30-214ENST00000514642 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
CCDC30-214ENST00000514642 NEFMP07197 916 aa10.6□□□□□ -0.71
CCDC30-214ENST00000514642 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
CCDC30-214ENST00000514642 ZNF326Q5BKZ1 582 aaKnown RBP10.59□□□□□ -0.71
CCDC30-214ENST00000514642 CHGAP10645 457 aaKnown RBP10.59□□□□□ -0.71
CCDC30-214ENST00000514642 BAZ1BQ9UIG0 1483 aaKnown RBP10.57□□□□□ -0.72
CCDC30-214ENST00000514642 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
CCDC30-214ENST00000514642 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
CCDC30-214ENST00000514642 CSRNP3Q8WYN3 585 aa10.53□□□□□ -0.72
CCDC30-214ENST00000514642 NEUROD1Q13562 356 aa10.52□□□□□ -0.73
CCDC30-214ENST00000514642 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
CCDC30-214ENST00000514642 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
CCDC30-214ENST00000514642 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
CCDC30-214ENST00000514642 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
CCDC30-214ENST00000514642 KCNH8Q96L42 1107 aa10.46□□□□□ -0.74
CCDC30-214ENST00000514642 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
CCDC30-214ENST00000514642 TSPY4P0CV99 314 aa10.44□□□□□ -0.74
CCDC30-214ENST00000514642 TSPY10P0CW01 314 aa10.44□□□□□ -0.74
CCDC30-214ENST00000514642 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
CCDC30-214ENST00000514642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC30-214ENST00000514642 PLEKHD1A6NEE1 506 aa10.42□□□□□ -0.74
CCDC30-214ENST00000514642 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
CCDC30-214ENST00000514642 CLSPNQ9HAW4 1339 aa10.39□□□□□ -0.75
CCDC30-214ENST00000514642 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
CCDC30-214ENST00000514642 A0A0G2JS52 829 aa10.36□□□□□ -0.75
CCDC30-214ENST00000514642 MTUS2Q5JR59 1369 aa10.36□□□□□ -0.75
CCDC30-214ENST00000514642 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
CCDC30-214ENST00000514642 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
CCDC30-214ENST00000514642 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
CCDC30-214ENST00000514642 BAZ1AQ9NRL2 1556 aaPredicted RBP10.33□□□□□ -0.76
CCDC30-214ENST00000514642 MYT1Q01538 1121 aa10.31□□□□□ -0.76
CCDC30-214ENST00000514642 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
CCDC30-214ENST00000514642 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
CCDC30-214ENST00000514642 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
CCDC30-214ENST00000514642 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
CCDC30-214ENST00000514642 KIF27Q86VH2 1401 aa10.29□□□□□ -0.76
CCDC30-214ENST00000514642 ANP32CO43423 234 aa10.29□□□□□ -0.76
CCDC30-214ENST00000514642 EIF4G1Q04637 1599 aaKnown RBP10.28□□□□□ -0.76
CCDC30-214ENST00000514642 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.76
CCDC30-214ENST00000514642 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
CCDC30-214ENST00000514642 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CCDC30-214ENST00000514642 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
CCDC30-214ENST00000514642 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
CCDC30-214ENST00000514642 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
CCDC30-214ENST00000514642 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
CCDC30-214ENST00000514642 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
CCDC30-214ENST00000514642 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
CCDC30-214ENST00000514642 CLIP1P30622 1438 aa10.22□□□□□ -0.77
CCDC30-214ENST00000514642 KANK1Q14678 1352 aa10.21□□□□□ -0.77
CCDC30-214ENST00000514642 CFDP1Q9UEE9 299 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms