RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
SH3D19-210ENST00000514152 HELZ2Q9BYK8 2649 aaKnown RBP3.97□□□□□ -1.77
SH3D19-210ENST00000514152 SETXQ7Z333 2677 aaKnown RBP3.97□□□□□ -1.77
SH3D19-210ENST00000514152 MAST4O15021 2626 aa3.96□□□□□ -1.78
SH3D19-210ENST00000514152 TNRC18O15417 2968 aaPredicted RBP3.96□□□□□ -1.78
SH3D19-210ENST00000514152 CFAP47Q6ZTR5 3102 aa3.95□□□□□ -1.78
SH3D19-210ENST00000514152 HRNRQ86YZ3 2850 aaPredicted RBP3.95□□□□□ -1.78
SH3D19-210ENST00000514152 FLNBO75369 2602 aaKnown RBP3.95□□□□□ -1.78
SH3D19-210ENST00000514152 ITPR1Q14643 2758 aa3.95□□□□□ -1.78
SH3D19-210ENST00000514152 COL12A1Q99715 3063 aa3.94□□□□□ -1.78
SH3D19-210ENST00000514152 INE1O15225 51 aa3.93□□□□□ -1.78
SH3D19-210ENST00000514152 NBEAL1Q6ZS30 2694 aa3.93□□□□□ -1.78
SH3D19-210ENST00000514152 ZFHX4Q86UP3 3567 aa3.93□□□□□ -1.78
SH3D19-210ENST00000514152 DMXL1Q9Y485 3027 aa3.92□□□□□ -1.78
SH3D19-210ENST00000514152 SPENQ96T58 3664 aaKnown RBP3.92□□□□□ -1.78
SH3D19-210ENST00000514152 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
SH3D19-210ENST00000514152 FLNCQ14315 2725 aa3.9□□□□□ -1.78
SH3D19-210ENST00000514152 P0C880 135 aa3.9□□□□□ -1.78
SH3D19-210ENST00000514152 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
SH3D19-210ENST00000514152 TEP1Q99973 2627 aaKnown RBP3.89□□□□□ -1.79
SH3D19-210ENST00000514152 DMDP11532 3685 aa3.89□□□□□ -1.79
SH3D19-210ENST00000514152 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
SH3D19-210ENST00000514152 DMBT1Q9UGM3 2413 aaPredicted RBP3.88□□□□□ -1.79
SH3D19-210ENST00000514152 Q5VSD8 79 aa3.86□□□□□ -1.79
SH3D19-210ENST00000514152 UBR5O95071 2799 aaPredicted RBP3.86□□□□□ -1.79
SH3D19-210ENST00000514152 DCHS1Q96JQ0 3298 aa3.86□□□□□ -1.79
SH3D19-210ENST00000514152 ASH1LQ9NR48 2969 aaKnown RBP3.86□□□□□ -1.79
SH3D19-210ENST00000514152 BAHCC1Q9P281 2608 aa3.85□□□□□ -1.79
SH3D19-210ENST00000514152 ASPMQ8IZT6 3477 aa3.85□□□□□ -1.79
SH3D19-210ENST00000514152 NOTCH1P46531 2555 aa3.85□□□□□ -1.79
SH3D19-210ENST00000514152 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
SH3D19-210ENST00000514152 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
SH3D19-210ENST00000514152 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
SH3D19-210ENST00000514152 CSMD1Q96PZ7 3565 aa3.83□□□□□ -1.8
SH3D19-210ENST00000514152 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
SH3D19-210ENST00000514152 RELNP78509 3460 aa3.82□□□□□ -1.8
SH3D19-210ENST00000514152 M0R2T5 61 aa3.82□□□□□ -1.8
SH3D19-210ENST00000514152 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
SH3D19-210ENST00000514152 APCP25054 2843 aa3.8□□□□□ -1.8
SH3D19-210ENST00000514152 LAMA5O15230 3695 aa3.8□□□□□ -1.8
SH3D19-210ENST00000514152 COL6A5A8TX70 2615 aa3.8□□□□□ -1.8
SH3D19-210ENST00000514152 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SH3D19-210ENST00000514152 TNP1P09430 55 aa3.79□□□□□ -1.8
SH3D19-210ENST00000514152 STAB1Q9NY15 2570 aa3.79□□□□□ -1.8
SH3D19-210ENST00000514152 ITPR2Q14571 2701 aa3.78□□□□□ -1.8
SH3D19-210ENST00000514152 HIVEP1P15822 2718 aa3.78□□□□□ -1.8
SH3D19-210ENST00000514152 FBN2P35556 2912 aa3.76□□□□□ -1.81
SH3D19-210ENST00000514152 NSD1Q96L73 2696 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-210ENST00000514152 DCHS2Q6V1P9 2916 aa3.74□□□□□ -1.81
SH3D19-210ENST00000514152 CELSR2Q9HCU4 2923 aa3.74□□□□□ -1.81
SH3D19-210ENST00000514152 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SH3D19-210ENST00000514152 CRYBG3Q68DQ2 2970 aa3.71□□□□□ -1.82
SH3D19-210ENST00000514152 KMT2BQ9UMN6 2715 aaPredicted RBP3.71□□□□□ -1.82
SH3D19-210ENST00000514152 NIPBLQ6KC79 2804 aaeCLIP3.71□□□□□ -1.82
SH3D19-210ENST00000514152 SVEP1Q4LDE5 3571 aa3.71□□□□□ -1.82
SH3D19-210ENST00000514152 KRTAP10-8P60410 259 aa3.7□□□□□ -1.82
SH3D19-210ENST00000514152 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
SH3D19-210ENST00000514152 MXRA5Q9NR99 2828 aa3.69□□□□□ -1.82
SH3D19-210ENST00000514152 XP32Q5T750 250 aa3.69□□□□□ -1.82
SH3D19-210ENST00000514152 NF1P21359 2839 aa3.69□□□□□ -1.82
SH3D19-210ENST00000514152 NBPF19A0A087WUL8 3843 aa3.69□□□□□ -1.82
SH3D19-210ENST00000514152 MUC3AQ02505 3323 aa3.67□□□□□ -1.82
SH3D19-210ENST00000514152 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
SH3D19-210ENST00000514152 CELSR1Q9NYQ6 3014 aa3.63□□□□□ -1.83
SH3D19-210ENST00000514152 BSNQ9UPA5 3926 aa3.62□□□□□ -1.83
SH3D19-210ENST00000514152 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
SH3D19-210ENST00000514152 KRTAP3-1Q9BYR8 98 aa3.6□□□□□ -1.83
SH3D19-210ENST00000514152 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
SH3D19-210ENST00000514152 TENM3Q9P273 2699 aa3.58□□□□□ -1.84
SH3D19-210ENST00000514152 ANK3Q12955 4377 aaKnown RBP3.57□□□□□ -1.84
SH3D19-210ENST00000514152 TGP01266 2768 aa3.57□□□□□ -1.84
SH3D19-210ENST00000514152 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
SH3D19-210ENST00000514152 PDZD2O15018 2839 aa3.54□□□□□ -1.84
SH3D19-210ENST00000514152 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
SH3D19-210ENST00000514152 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.85
SH3D19-210ENST00000514152 CUBNO60494 3623 aa3.51□□□□□ -1.85
SH3D19-210ENST00000514152 TENM1Q9UKZ4 2725 aa3.5□□□□□ -1.85
SH3D19-210ENST00000514152 TENM4Q6N022 2769 aa3.49□□□□□ -1.85
SH3D19-210ENST00000514152 MT3P25713 68 aa3.49□□□□□ -1.85
SH3D19-210ENST00000514152 CSMD2Q7Z408 3487 aa3.48□□□□□ -1.85
SH3D19-210ENST00000514152 VWFP04275 2813 aa3.47□□□□□ -1.85
SH3D19-210ENST00000514152 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
SH3D19-210ENST00000514152 VPS13CQ709C8 3753 aa3.44□□□□□ -1.86
SH3D19-210ENST00000514152 ZNF469Q96JG9 3925 aaPredicted RBP3.41□□□□□ -1.86
SH3D19-210ENST00000514152 OTOGQ6ZRI0 2925 aa3.41□□□□□ -1.86
SH3D19-210ENST00000514152 TRRAPQ9Y4A5 3859 aa3.4□□□□□ -1.87
SH3D19-210ENST00000514152 AKAP9Q99996 3911 aa3.39□□□□□ -1.87
SH3D19-210ENST00000514152 TENM2Q9NT68 2774 aa3.37□□□□□ -1.87
SH3D19-210ENST00000514152 PKD1L1Q8TDX9 2849 aa3.37□□□□□ -1.87
SH3D19-210ENST00000514152 KRTAP21-3Q3LHN1 58 aa3.37□□□□□ -1.87
SH3D19-210ENST00000514152 FBN1P35555 2871 aaKnown RBP3.36□□□□□ -1.87
SH3D19-210ENST00000514152 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
SH3D19-210ENST00000514152 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
SH3D19-210ENST00000514152 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
SH3D19-210ENST00000514152 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
SH3D19-210ENST00000514152 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
SH3D19-210ENST00000514152 FBN3Q75N90 2809 aa3.26□□□□□ -1.89
SH3D19-210ENST00000514152 MEGF8Q7Z7M0 2845 aa3.22□□□□□ -1.89
SH3D19-210ENST00000514152 ALMS1Q8TCU4 4167 aa3.17□□□□□ -1.9
SH3D19-210ENST00000514152 DNAH9Q9NYC9 4486 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms