RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
LINC01340-201ENST00000504012 NF1P21359 2839 aa3.28□□□□□ -1.88
LINC01340-201ENST00000504012 ATMQ13315 3056 aa3.28□□□□□ -1.89
LINC01340-201ENST00000504012 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
LINC01340-201ENST00000504012 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
LINC01340-201ENST00000504012 TYMSOSQ8TAI1 123 aa3.27□□□□□ -1.89
LINC01340-201ENST00000504012 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
LINC01340-201ENST00000504012 EPG5Q9HCE0 2579 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 SPINK1P00995 79 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 SPACA4Q8TDM5 124 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 SVEP1Q4LDE5 3571 aa3.26□□□□□ -1.89
LINC01340-201ENST00000504012 RELNP78509 3460 aa3.25□□□□□ -1.89
LINC01340-201ENST00000504012 LAMA5O15230 3695 aa3.25□□□□□ -1.89
LINC01340-201ENST00000504012 KRTAP10-9P60411 292 aa3.24□□□□□ -1.89
LINC01340-201ENST00000504012 UNC79Q9P2D8 2635 aa3.24□□□□□ -1.89
LINC01340-201ENST00000504012 CFAP46Q8IYW2 2715 aa3.24□□□□□ -1.89
LINC01340-201ENST00000504012 LRRK2Q5S007 2527 aa3.23□□□□□ -1.89
LINC01340-201ENST00000504012 KRTAP24-1Q3LI83 254 aa3.23□□□□□ -1.89
LINC01340-201ENST00000504012 MTORP42345 2549 aa3.23□□□□□ -1.89
LINC01340-201ENST00000504012 NAV2Q8IVL1 2488 aa3.21□□□□□ -1.89
LINC01340-201ENST00000504012 EYSQ5T1H1 3165 aa3.21□□□□□ -1.9
LINC01340-201ENST00000504012 SONP18583 2426 aaKnown RBP3.21□□□□□ -1.9
LINC01340-201ENST00000504012 MUC6Q6W4X9 2439 aa3.21□□□□□ -1.9
LINC01340-201ENST00000504012 CHD8Q9HCK8 2581 aa3.19□□□□□ -1.9
LINC01340-201ENST00000504012 CRYBG3Q68DQ2 2970 aa3.19□□□□□ -1.9
LINC01340-201ENST00000504012 KRTAP1-5Q9BYS1 174 aa3.19□□□□□ -1.9
LINC01340-201ENST00000504012 ZFHX2Q9C0A1 2572 aaPredicted RBP3.18□□□□□ -1.9
LINC01340-201ENST00000504012 PIEZO1Q92508 2521 aa3.18□□□□□ -1.9
LINC01340-201ENST00000504012 PKD1L2Q7Z442 2459 aa3.18□□□□□ -1.9
LINC01340-201ENST00000504012 ZANQ9Y493 2812 aa3.18□□□□□ -1.9
LINC01340-201ENST00000504012 FLG2Q5D862 2391 aaPredicted RBP3.17□□□□□ -1.9
LINC01340-201ENST00000504012 HIVEP1P15822 2718 aa3.17□□□□□ -1.9
LINC01340-201ENST00000504012 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
LINC01340-201ENST00000504012 KRTAP10-11P60412 298 aa3.17□□□□□ -1.9
LINC01340-201ENST00000504012 KRTAP3-1Q9BYR8 98 aa3.17□□□□□ -1.9
LINC01340-201ENST00000504012 FBN2P35556 2912 aa3.16□□□□□ -1.9
LINC01340-201ENST00000504012 TTC28Q96AY4 2481 aa3.16□□□□□ -1.9
LINC01340-201ENST00000504012 NIPBLQ6KC79 2804 aaeCLIP3.16□□□□□ -1.9
LINC01340-201ENST00000504012 SRRM2Q9UQ35 2752 aaKnown RBP3.15□□□□□ -1.9
LINC01340-201ENST00000504012 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
LINC01340-201ENST00000504012 ACACBO00763 2458 aa3.14□□□□□ -1.91
LINC01340-201ENST00000504012 SETD2Q9BYW2 2564 aaPredicted RBP3.14□□□□□ -1.91
LINC01340-201ENST00000504012 UBR5O95071 2799 aaPredicted RBP3.13□□□□□ -1.91
LINC01340-201ENST00000504012 ANK3Q12955 4377 aaKnown RBP3.13□□□□□ -1.91
LINC01340-201ENST00000504012 CENPEQ02224 2701 aa3.13□□□□□ -1.91
LINC01340-201ENST00000504012 KRTAP10-2P60368 255 aa3.13□□□□□ -1.91
LINC01340-201ENST00000504012 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
LINC01340-201ENST00000504012 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
LINC01340-201ENST00000504012 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
LINC01340-201ENST00000504012 APLNQ9ULZ1 77 aa3.13□□□□□ -1.91
LINC01340-201ENST00000504012 VPS13CQ709C8 3753 aa3.12□□□□□ -1.91
LINC01340-201ENST00000504012 ITPR3Q14573 2671 aa3.12□□□□□ -1.91
LINC01340-201ENST00000504012 UBE2DNLQ8IWF7 75 aa3.12□□□□□ -1.91
LINC01340-201ENST00000504012 BAHCC1Q9P281 2608 aa3.12□□□□□ -1.91
LINC01340-201ENST00000504012 ZNF462Q96JM2 2506 aa3.12□□□□□ -1.91
LINC01340-201ENST00000504012 HELZ2Q9BYK8 2649 aaKnown RBP3.11□□□□□ -1.91
LINC01340-201ENST00000504012 S4R3F8 94 aa3.11□□□□□ -1.91
LINC01340-201ENST00000504012 POLQO75417 2590 aa3.11□□□□□ -1.91
LINC01340-201ENST00000504012 CCDC168Q8NDH2 2452 aa3.11□□□□□ -1.91
LINC01340-201ENST00000504012 KRTAP13-2Q52LG2 175 aa3.1□□□□□ -1.91
LINC01340-201ENST00000504012 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
LINC01340-201ENST00000504012 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
LINC01340-201ENST00000504012 TENM4Q6N022 2769 aa3.1□□□□□ -1.91
LINC01340-201ENST00000504012 HECTD1Q9ULT8 2610 aa3.09□□□□□ -1.91
LINC01340-201ENST00000504012 ABCA12Q86UK0 2595 aa3.08□□□□□ -1.92
LINC01340-201ENST00000504012 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
LINC01340-201ENST00000504012 FLNCQ14315 2725 aa3.06□□□□□ -1.92
LINC01340-201ENST00000504012 FLNAP21333 2647 aaKnown RBP3.05□□□□□ -1.92
LINC01340-201ENST00000504012 NOTCH2Q04721 2471 aa3.04□□□□□ -1.92
LINC01340-201ENST00000504012 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
LINC01340-201ENST00000504012 A0A0D9SG42 100 aa3.03□□□□□ -1.92
LINC01340-201ENST00000504012 KRTAP12-1P59990 96 aa3.03□□□□□ -1.92
LINC01340-201ENST00000504012 ACANP16112 2415 aa3.03□□□□□ -1.92
LINC01340-201ENST00000504012 CSMD2Q7Z408 3487 aa3.03□□□□□ -1.92
LINC01340-201ENST00000504012 VWFP04275 2813 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 TENM3Q9P273 2699 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 MEGF8Q7Z7M0 2845 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 PKD1L1Q8TDX9 2849 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 MYO18BQ8IUG5 2567 aa3.02□□□□□ -1.93
LINC01340-201ENST00000504012 FAM208BQ5VWN6 2430 aa3.01□□□□□ -1.93
LINC01340-201ENST00000504012 M0QZ58 72 aa3.01□□□□□ -1.93
LINC01340-201ENST00000504012 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
LINC01340-201ENST00000504012 FASNP49327 2511 aaKnown RBP3□□□□□ -1.93
LINC01340-201ENST00000504012 NBEAL1Q6ZS30 2694 aa3□□□□□ -1.93
LINC01340-201ENST00000504012 TEP1Q99973 2627 aaKnown RBP2.99□□□□□ -1.93
LINC01340-201ENST00000504012 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
LINC01340-201ENST00000504012 R4GN34 69 aa2.99□□□□□ -1.93
LINC01340-201ENST00000504012 TRRAPQ9Y4A5 3859 aa2.98□□□□□ -1.93
LINC01340-201ENST00000504012 SMR3AQ99954 134 aa2.98□□□□□ -1.93
LINC01340-201ENST00000504012 FBN1P35555 2871 aaKnown RBP2.98□□□□□ -1.93
LINC01340-201ENST00000504012 TGP01266 2768 aa2.97□□□□□ -1.93
LINC01340-201ENST00000504012 DNAH8Q96JB1 4490 aa2.97□□□□□ -1.93
LINC01340-201ENST00000504012 VPS13DQ5THJ4 4388 aa2.95□□□□□ -1.94
LINC01340-201ENST00000504012 PDZD2O15018 2839 aa2.95□□□□□ -1.94
LINC01340-201ENST00000504012 IGSF10Q6WRI0 2623 aa2.95□□□□□ -1.94
LINC01340-201ENST00000504012 MAST4O15021 2626 aa2.94□□□□□ -1.94
LINC01340-201ENST00000504012 DNAH3Q8TD57 4116 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms