RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 KRTAP13-3Q3SY46 172 aa4.05□□□□□ -1.76
NPHP1-211ENST00000496524 UNC80Q8N2C7 3258 aa4.05□□□□□ -1.76
NPHP1-211ENST00000496524 KALRNO60229 2985 aa4.03□□□□□ -1.76
NPHP1-211ENST00000496524 LRBAP50851 2863 aa4.03□□□□□ -1.76
NPHP1-211ENST00000496524 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.77
NPHP1-211ENST00000496524 MGAQ8IWI9 3026 aa4.02□□□□□ -1.77
NPHP1-211ENST00000496524 WDFY4Q6ZS81 3184 aa4.02□□□□□ -1.77
NPHP1-211ENST00000496524 ASH1LQ9NR48 2969 aaKnown RBP4.01□□□□□ -1.77
NPHP1-211ENST00000496524 TGP01266 2768 aa4□□□□□ -1.77
NPHP1-211ENST00000496524 KRTAP21-3Q3LHN1 58 aa3.99□□□□□ -1.77
NPHP1-211ENST00000496524 FRYLO94915 3013 aa3.98□□□□□ -1.77
NPHP1-211ENST00000496524 RANBP2P49792 3224 aaKnown RBP3.98□□□□□ -1.77
NPHP1-211ENST00000496524 TENM3Q9P273 2699 aa3.98□□□□□ -1.77
NPHP1-211ENST00000496524 PRUNE2Q8WUY3 3088 aa3.96□□□□□ -1.78
NPHP1-211ENST00000496524 CELSR3Q9NYQ7 3312 aa3.95□□□□□ -1.78
NPHP1-211ENST00000496524 COL12A1Q99715 3063 aa3.94□□□□□ -1.78
NPHP1-211ENST00000496524 VPS13AQ96RL7 3174 aa3.94□□□□□ -1.78
NPHP1-211ENST00000496524 LAMA1P25391 3075 aa3.93□□□□□ -1.78
NPHP1-211ENST00000496524 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.78
NPHP1-211ENST00000496524 DMXL2Q8TDJ6 3036 aa3.9□□□□□ -1.78
NPHP1-211ENST00000496524 CHD7Q9P2D1 2997 aa3.89□□□□□ -1.79
NPHP1-211ENST00000496524 XIRP2A4UGR9 3374 aa3.87□□□□□ -1.79
NPHP1-211ENST00000496524 MKI67P46013 3256 aaKnown RBP3.87□□□□□ -1.79
NPHP1-211ENST00000496524 CHD9Q3L8U1 2897 aa3.86□□□□□ -1.79
NPHP1-211ENST00000496524 TENM1Q9UKZ4 2725 aa3.85□□□□□ -1.79
NPHP1-211ENST00000496524 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.79
NPHP1-211ENST00000496524 PDZD2O15018 2839 aa3.8□□□□□ -1.8
NPHP1-211ENST00000496524 TENM4Q6N022 2769 aa3.8□□□□□ -1.8
NPHP1-211ENST00000496524 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
NPHP1-211ENST00000496524 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
NPHP1-211ENST00000496524 BOD1L1Q8NFC6 3051 aa3.77□□□□□ -1.81
NPHP1-211ENST00000496524 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
NPHP1-211ENST00000496524 MXRA5Q9NR99 2828 aa3.76□□□□□ -1.81
NPHP1-211ENST00000496524 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
NPHP1-211ENST00000496524 NF1P21359 2839 aa3.76□□□□□ -1.81
NPHP1-211ENST00000496524 ATMQ13315 3056 aa3.75□□□□□ -1.81
NPHP1-211ENST00000496524 ZZEF1O43149 2961 aa3.74□□□□□ -1.81
NPHP1-211ENST00000496524 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
NPHP1-211ENST00000496524 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
NPHP1-211ENST00000496524 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
NPHP1-211ENST00000496524 ADGRG4Q8IZF6 3080 aa3.73□□□□□ -1.81
NPHP1-211ENST00000496524 HTTP42858 3142 aa3.72□□□□□ -1.81
NPHP1-211ENST00000496524 CFAP47Q6ZTR5 3102 aa3.71□□□□□ -1.82
NPHP1-211ENST00000496524 COL6A3P12111 3177 aa3.7□□□□□ -1.82
NPHP1-211ENST00000496524 DMXL1Q9Y485 3027 aa3.7□□□□□ -1.82
NPHP1-211ENST00000496524 NBEAQ8NFP9 2946 aa3.7□□□□□ -1.82
NPHP1-211ENST00000496524 DCHS2Q6V1P9 2916 aa3.68□□□□□ -1.82
NPHP1-211ENST00000496524 SRRM2Q9UQ35 2752 aaKnown RBP3.68□□□□□ -1.82
NPHP1-211ENST00000496524 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
NPHP1-211ENST00000496524 TNRC18O15417 2968 aaPredicted RBP3.67□□□□□ -1.82
NPHP1-211ENST00000496524 TACC2O95359 2948 aa3.67□□□□□ -1.82
NPHP1-211ENST00000496524 LAMA3Q16787 3333 aa3.65□□□□□ -1.82
NPHP1-211ENST00000496524 VCANP13611 3396 aa3.65□□□□□ -1.82
NPHP1-211ENST00000496524 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
NPHP1-211ENST00000496524 USP34Q70CQ2 3546 aa3.64□□□□□ -1.83
NPHP1-211ENST00000496524 BRCA2P51587 3418 aa3.63□□□□□ -1.83
NPHP1-211ENST00000496524 SPEGQ15772 3267 aa3.63□□□□□ -1.83
NPHP1-211ENST00000496524 KRTAP3-2Q9BYR7 98 aa3.58□□□□□ -1.84
NPHP1-211ENST00000496524 ZFHX4Q86UP3 3567 aa3.58□□□□□ -1.84
NPHP1-211ENST00000496524 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
NPHP1-211ENST00000496524 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.84
NPHP1-211ENST00000496524 CDH23Q9H251 3354 aa3.53□□□□□ -1.84
NPHP1-211ENST00000496524 ZANQ9Y493 2812 aa3.53□□□□□ -1.84
NPHP1-211ENST00000496524 ZFHX3Q15911 3703 aa3.53□□□□□ -1.84
NPHP1-211ENST00000496524 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
NPHP1-211ENST00000496524 SZT2Q5T011 3432 aa3.51□□□□□ -1.85
NPHP1-211ENST00000496524 FBN2P35556 2912 aa3.49□□□□□ -1.85
NPHP1-211ENST00000496524 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
NPHP1-211ENST00000496524 PKD1L1Q8TDX9 2849 aa3.47□□□□□ -1.85
NPHP1-211ENST00000496524 DCHS1Q96JQ0 3298 aa3.46□□□□□ -1.86
NPHP1-211ENST00000496524 LOC400499M0QZD8 3231 aa3.45□□□□□ -1.86
NPHP1-211ENST00000496524 VWFP04275 2813 aa3.43□□□□□ -1.86
NPHP1-211ENST00000496524 FBN3Q75N90 2809 aa3.42□□□□□ -1.86
NPHP1-211ENST00000496524 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
NPHP1-211ENST00000496524 WDFY3Q8IZQ1 3526 aa3.38□□□□□ -1.87
NPHP1-211ENST00000496524 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
NPHP1-211ENST00000496524 SPTBN5Q9NRC6 3674 aaKnown RBP3.36□□□□□ -1.87
NPHP1-211ENST00000496524 HRNRQ86YZ3 2850 aaPredicted RBP3.36□□□□□ -1.87
NPHP1-211ENST00000496524 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
NPHP1-211ENST00000496524 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
NPHP1-211ENST00000496524 NBPF19A0A087WUL8 3843 aa3.34□□□□□ -1.87
NPHP1-211ENST00000496524 ASPMQ8IZT6 3477 aa3.34□□□□□ -1.87
NPHP1-211ENST00000496524 OTOGQ6ZRI0 2925 aa3.28□□□□□ -1.88
NPHP1-211ENST00000496524 MYO15AQ9UKN7 3530 aa3.27□□□□□ -1.89
NPHP1-211ENST00000496524 SPENQ96T58 3664 aaKnown RBP3.27□□□□□ -1.89
NPHP1-211ENST00000496524 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
NPHP1-211ENST00000496524 CSMD1Q96PZ7 3565 aa3.27□□□□□ -1.89
NPHP1-211ENST00000496524 ALMS1Q8TCU4 4167 aa3.24□□□□□ -1.89
NPHP1-211ENST00000496524 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
NPHP1-211ENST00000496524 LAMA5O15230 3695 aa3.22□□□□□ -1.89
NPHP1-211ENST00000496524 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
NPHP1-211ENST00000496524 RELNP78509 3460 aa3.19□□□□□ -1.9
NPHP1-211ENST00000496524 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
NPHP1-211ENST00000496524 MUC3AQ02505 3323 aa3.15□□□□□ -1.91
NPHP1-211ENST00000496524 MT3P25713 68 aa3.15□□□□□ -1.91
NPHP1-211ENST00000496524 SMG1Q96Q15 3661 aaKnown RBP3.13□□□□□ -1.91
NPHP1-211ENST00000496524 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
NPHP1-211ENST00000496524 KRTAP10-4P60372 401 aaPredicted RBP3.08□□□□□ -1.92
NPHP1-211ENST00000496524 FBN1P35555 2871 aaKnown RBP3.06□□□□□ -1.92
NPHP1-211ENST00000496524 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms