RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
NPHP1-211ENST00000496524 MYT1Q01538 1121 aa13.44□□□□□ -0.26
NPHP1-211ENST00000496524 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
NPHP1-211ENST00000496524 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
NPHP1-211ENST00000496524 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
NPHP1-211ENST00000496524 CENPBP07199 599 aaPredicted RBP12.84□□□□□ -0.35
NPHP1-211ENST00000496524 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
NPHP1-211ENST00000496524 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
NPHP1-211ENST00000496524 APLP2Q06481 763 aa12.59□□□□□ -0.39
NPHP1-211ENST00000496524 ZEB1P37275 1124 aaPredicted RBP12.57□□□□□ -0.4
NPHP1-211ENST00000496524 NEFLP07196 543 aa12.55□□□□□ -0.4
NPHP1-211ENST00000496524 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
NPHP1-211ENST00000496524 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
NPHP1-211ENST00000496524 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
NPHP1-211ENST00000496524 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
NPHP1-211ENST00000496524 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
NPHP1-211ENST00000496524 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
NPHP1-211ENST00000496524 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
NPHP1-211ENST00000496524 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
NPHP1-211ENST00000496524 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
NPHP1-211ENST00000496524 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
NPHP1-211ENST00000496524 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
NPHP1-211ENST00000496524 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
NPHP1-211ENST00000496524 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
NPHP1-211ENST00000496524 HRCP23327 699 aa11.68□□□□□ -0.54
NPHP1-211ENST00000496524 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
NPHP1-211ENST00000496524 ANP32BQ92688 251 aaKnown RBP11.67□□□□□ -0.54
NPHP1-211ENST00000496524 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
NPHP1-211ENST00000496524 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
NPHP1-211ENST00000496524 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
NPHP1-211ENST00000496524 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
NPHP1-211ENST00000496524 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
NPHP1-211ENST00000496524 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
NPHP1-211ENST00000496524 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
NPHP1-211ENST00000496524 DIEXFQ68CQ4 756 aaKnown RBP11.52□□□□□ -0.57
NPHP1-211ENST00000496524 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
NPHP1-211ENST00000496524 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
NPHP1-211ENST00000496524 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.59
NPHP1-211ENST00000496524 NISCHQ9Y2I1 1504 aa11.36□□□□□ -0.59
NPHP1-211ENST00000496524 NEFMP07197 916 aa11.36□□□□□ -0.59
NPHP1-211ENST00000496524 ANP32CO43423 234 aa11.34□□□□□ -0.59
NPHP1-211ENST00000496524 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
NPHP1-211ENST00000496524 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
NPHP1-211ENST00000496524 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
NPHP1-211ENST00000496524 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
NPHP1-211ENST00000496524 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-211ENST00000496524 ITGAEP38570 1179 aa11.27□□□□□ -0.6
NPHP1-211ENST00000496524 BCANQ96GW7 911 aa11.27□□□□□ -0.6
NPHP1-211ENST00000496524 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
NPHP1-211ENST00000496524 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
NPHP1-211ENST00000496524 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
NPHP1-211ENST00000496524 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.62
NPHP1-211ENST00000496524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
NPHP1-211ENST00000496524 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
NPHP1-211ENST00000496524 ACIN1Q9UKV3 1341 aaKnown RBP11.19□□□□□ -0.62
NPHP1-211ENST00000496524 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
NPHP1-211ENST00000496524 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
NPHP1-211ENST00000496524 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
NPHP1-211ENST00000496524 DDRGK1Q96HY6 314 aa11.07□□□□□ -0.64
NPHP1-211ENST00000496524 NBR1Q14596 966 aa11.06□□□□□ -0.64
NPHP1-211ENST00000496524 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.05□□□□□ -0.64
NPHP1-211ENST00000496524 GOLGA6L22H0YM25 854 aa11.05□□□□□ -0.64
NPHP1-211ENST00000496524 BECN1Q14457 450 aa11.04□□□□□ -0.64
NPHP1-211ENST00000496524 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
NPHP1-211ENST00000496524 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
NPHP1-211ENST00000496524 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.65
NPHP1-211ENST00000496524 FKBP8Q14318 412 aa11.02□□□□□ -0.65
NPHP1-211ENST00000496524 DNTTIP2Q5QJE6 756 aaKnown RBP11.01□□□□□ -0.65
NPHP1-211ENST00000496524 NEUROD1Q13562 356 aa11□□□□□ -0.65
NPHP1-211ENST00000496524 FAM50AQ14320 339 aaKnown RBP10.99□□□□□ -0.65
NPHP1-211ENST00000496524 CCDC136Q96JN2 1154 aa10.97□□□□□ -0.65
NPHP1-211ENST00000496524 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.65
NPHP1-211ENST00000496524 PTMAP06454 111 aaKnown RBP10.95□□□□□ -0.66
NPHP1-211ENST00000496524 ARXQ96QS3 562 aa10.95□□□□□ -0.66
NPHP1-211ENST00000496524 NAP1L5Q96NT1 182 aaPredicted RBP10.94□□□□□ -0.66
NPHP1-211ENST00000496524 GOLGA6L6A8MZA4 724 aa10.93□□□□□ -0.66
NPHP1-211ENST00000496524 PPM1GO15355 546 aaPredicted RBP10.93□□□□□ -0.66
NPHP1-211ENST00000496524 NRDCO43847 1150 aa10.92□□□□□ -0.66
NPHP1-211ENST00000496524 CHAF1AQ13111 956 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-211ENST00000496524 L1TD1Q5T7N2 865 aaKnown RBP10.89□□□□□ -0.67
NPHP1-211ENST00000496524 MYH16Q9H6N6 1097 aa10.89□□□□□ -0.67
NPHP1-211ENST00000496524 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
NPHP1-211ENST00000496524 ZNF326Q5BKZ1 582 aaKnown RBP10.88□□□□□ -0.67
NPHP1-211ENST00000496524 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPHP1-211ENST00000496524 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
NPHP1-211ENST00000496524 CASC1Q6TDU7 716 aa10.81□□□□□ -0.68
NPHP1-211ENST00000496524 MSNP26038 577 aaKnown RBP10.81□□□□□ -0.68
NPHP1-211ENST00000496524 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
NPHP1-211ENST00000496524 CALRP27797 417 aaKnown RBP10.79□□□□□ -0.68
NPHP1-211ENST00000496524 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
NPHP1-211ENST00000496524 WDR43Q15061 677 aaKnown RBP eCLIP10.76□□□□□ -0.69
NPHP1-211ENST00000496524 PTMSP20962 102 aa10.74□□□□□ -0.69
NPHP1-211ENST00000496524 FAM9BQ8IZU0 186 aa10.74□□□□□ -0.69
NPHP1-211ENST00000496524 TONSLQ96HA7 1378 aa10.72□□□□□ -0.69
NPHP1-211ENST00000496524 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-211ENST00000496524 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
NPHP1-211ENST00000496524 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
NPHP1-211ENST00000496524 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
NPHP1-211ENST00000496524 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
NPHP1-211ENST00000496524 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms