RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
PEX1-210ENST00000496420 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
PEX1-210ENST00000496420 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
PEX1-210ENST00000496420 A8MUU9 505 aa4.84□□□□□ -1.63
PEX1-210ENST00000496420 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
PEX1-210ENST00000496420 CMYA5Q8N3K9 4069 aa4.82□□□□□ -1.64
PEX1-210ENST00000496420 RANBP2P49792 3224 aaKnown RBP4.8□□□□□ -1.64
PEX1-210ENST00000496420 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
PEX1-210ENST00000496420 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
PEX1-210ENST00000496420 ANK3Q12955 4377 aaKnown RBP4.78□□□□□ -1.64
PEX1-210ENST00000496420 LAMA2P24043 3122 aaKnown RBP4.77□□□□□ -1.65
PEX1-210ENST00000496420 NBEAL2Q6ZNJ1 2754 aa4.77□□□□□ -1.65
PEX1-210ENST00000496420 CRYBG3Q68DQ2 2970 aa4.76□□□□□ -1.65
PEX1-210ENST00000496420 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
PEX1-210ENST00000496420 CFAP47Q6ZTR5 3102 aa4.75□□□□□ -1.65
PEX1-210ENST00000496420 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
PEX1-210ENST00000496420 TENM3Q9P273 2699 aa4.74□□□□□ -1.65
PEX1-210ENST00000496420 XP32Q5T750 250 aa4.74□□□□□ -1.65
PEX1-210ENST00000496420 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
PEX1-210ENST00000496420 NIPBLQ6KC79 2804 aaeCLIP4.73□□□□□ -1.65
PEX1-210ENST00000496420 CFAP54Q96N23 3096 aa4.73□□□□□ -1.65
PEX1-210ENST00000496420 A0A0C4DFX4 3053 aa4.72□□□□□ -1.65
PEX1-210ENST00000496420 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
PEX1-210ENST00000496420 LYSTQ99698 3801 aa4.72□□□□□ -1.65
PEX1-210ENST00000496420 TACC2O95359 2948 aa4.71□□□□□ -1.66
PEX1-210ENST00000496420 APCP25054 2843 aa4.71□□□□□ -1.66
PEX1-210ENST00000496420 A0A1B0GVY2 172 aa4.71□□□□□ -1.66
PEX1-210ENST00000496420 TNP1P09430 55 aa4.7□□□□□ -1.66
PEX1-210ENST00000496420 WDFY4Q6ZS81 3184 aa4.69□□□□□ -1.66
PEX1-210ENST00000496420 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
PEX1-210ENST00000496420 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
PEX1-210ENST00000496420 ROMO1P60602 79 aa4.67□□□□□ -1.66
PEX1-210ENST00000496420 TENM1Q9UKZ4 2725 aa4.66□□□□□ -1.66
PEX1-210ENST00000496420 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.66
PEX1-210ENST00000496420 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
PEX1-210ENST00000496420 TRIOO75962 3097 aa4.62□□□□□ -1.67
PEX1-210ENST00000496420 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
PEX1-210ENST00000496420 COL12A1Q99715 3063 aa4.61□□□□□ -1.67
PEX1-210ENST00000496420 SVEP1Q4LDE5 3571 aa4.61□□□□□ -1.67
PEX1-210ENST00000496420 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
PEX1-210ENST00000496420 ASH1LQ9NR48 2969 aaKnown RBP4.61□□□□□ -1.67
PEX1-210ENST00000496420 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
PEX1-210ENST00000496420 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
PEX1-210ENST00000496420 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
PEX1-210ENST00000496420 DNAH7Q8WXX0 4024 aa4.57□□□□□ -1.68
PEX1-210ENST00000496420 ATMQ13315 3056 aa4.55□□□□□ -1.68
PEX1-210ENST00000496420 FRYLO94915 3013 aa4.55□□□□□ -1.68
PEX1-210ENST00000496420 LRBAP50851 2863 aa4.55□□□□□ -1.68
PEX1-210ENST00000496420 DCHS1Q96JQ0 3298 aa4.55□□□□□ -1.68
PEX1-210ENST00000496420 LOC400499M0QZD8 3231 aa4.54□□□□□ -1.68
PEX1-210ENST00000496420 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.69
PEX1-210ENST00000496420 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
PEX1-210ENST00000496420 PRKDCP78527 4128 aaKnown RBP4.49□□□□□ -1.69
PEX1-210ENST00000496420 LAMA1P25391 3075 aa4.49□□□□□ -1.69
PEX1-210ENST00000496420 NF1P21359 2839 aa4.49□□□□□ -1.69
PEX1-210ENST00000496420 Q5VV11 94 aa4.49□□□□□ -1.69
PEX1-210ENST00000496420 CELSR2Q9HCU4 2923 aa4.48□□□□□ -1.69
PEX1-210ENST00000496420 KALRNO60229 2985 aa4.47□□□□□ -1.69
PEX1-210ENST00000496420 DCHS2Q6V1P9 2916 aa4.47□□□□□ -1.69
PEX1-210ENST00000496420 NBEAQ8NFP9 2946 aa4.47□□□□□ -1.69
PEX1-210ENST00000496420 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.7
PEX1-210ENST00000496420 DMXL2Q8TDJ6 3036 aa4.44□□□□□ -1.7
PEX1-210ENST00000496420 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
PEX1-210ENST00000496420 BOD1L1Q8NFC6 3051 aa4.44□□□□□ -1.7
PEX1-210ENST00000496420 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
PEX1-210ENST00000496420 MXRA5Q9NR99 2828 aa4.43□□□□□ -1.7
PEX1-210ENST00000496420 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
PEX1-210ENST00000496420 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
PEX1-210ENST00000496420 DYNC2H1Q8NCM8 4307 aaKnown RBP4.39□□□□□ -1.71
PEX1-210ENST00000496420 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
PEX1-210ENST00000496420 A8MU10 97 aa4.38□□□□□ -1.71
PEX1-210ENST00000496420 A6NN06 94 aa4.36□□□□□ -1.71
PEX1-210ENST00000496420 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
PEX1-210ENST00000496420 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
PEX1-210ENST00000496420 VPS13AQ96RL7 3174 aa4.35□□□□□ -1.71
PEX1-210ENST00000496420 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
PEX1-210ENST00000496420 FREM2Q5SZK8 3169 aa4.35□□□□□ -1.71
PEX1-210ENST00000496420 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
PEX1-210ENST00000496420 ZANQ9Y493 2812 aa4.3□□□□□ -1.72
PEX1-210ENST00000496420 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
PEX1-210ENST00000496420 PDZD2O15018 2839 aa4.29□□□□□ -1.72
PEX1-210ENST00000496420 VWFP04275 2813 aa4.28□□□□□ -1.72
PEX1-210ENST00000496420 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
PEX1-210ENST00000496420 FBN2P35556 2912 aa4.27□□□□□ -1.73
PEX1-210ENST00000496420 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
PEX1-210ENST00000496420 DMXL1Q9Y485 3027 aa4.26□□□□□ -1.73
PEX1-210ENST00000496420 P0C880 135 aa4.24□□□□□ -1.73
PEX1-210ENST00000496420 SRRM2Q9UQ35 2752 aaKnown RBP4.22□□□□□ -1.73
PEX1-210ENST00000496420 TGP01266 2768 aa4.21□□□□□ -1.74
PEX1-210ENST00000496420 ADGRG4Q8IZF6 3080 aa4.21□□□□□ -1.74
PEX1-210ENST00000496420 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
PEX1-210ENST00000496420 CELSR1Q9NYQ6 3014 aa4.19□□□□□ -1.74
PEX1-210ENST00000496420 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
PEX1-210ENST00000496420 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
PEX1-210ENST00000496420 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
PEX1-210ENST00000496420 H0YAA0 97 aa4.16□□□□□ -1.74
PEX1-210ENST00000496420 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.75
PEX1-210ENST00000496420 OTOGQ6ZRI0 2925 aa4.12□□□□□ -1.75
PEX1-210ENST00000496420 VPS13DQ5THJ4 4388 aa4.1□□□□□ -1.75
PEX1-210ENST00000496420 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms