RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 ADGRG4Q8IZF6 3080 aa4.55□□□□□ -1.68
MCF2L2-212ENST00000488149 HIVEP1P15822 2718 aa4.54□□□□□ -1.68
MCF2L2-212ENST00000488149 TACC2O95359 2948 aa4.54□□□□□ -1.68
MCF2L2-212ENST00000488149 FLNCQ14315 2725 aa4.54□□□□□ -1.68
MCF2L2-212ENST00000488149 LAMA1P25391 3075 aa4.54□□□□□ -1.68
MCF2L2-212ENST00000488149 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
MCF2L2-212ENST00000488149 H0YAA0 97 aa4.5□□□□□ -1.69
MCF2L2-212ENST00000488149 ATMQ13315 3056 aa4.5□□□□□ -1.69
MCF2L2-212ENST00000488149 CELSR2Q9HCU4 2923 aa4.5□□□□□ -1.69
MCF2L2-212ENST00000488149 TNP1P09430 55 aa4.49□□□□□ -1.69
MCF2L2-212ENST00000488149 REV3LO60673 3130 aa4.49□□□□□ -1.69
MCF2L2-212ENST00000488149 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
MCF2L2-212ENST00000488149 DNAH14Q0VDD8 3507 aa4.49□□□□□ -1.69
MCF2L2-212ENST00000488149 VCANP13611 3396 aa4.48□□□□□ -1.69
MCF2L2-212ENST00000488149 CDH23Q9H251 3354 aa4.48□□□□□ -1.69
MCF2L2-212ENST00000488149 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
MCF2L2-212ENST00000488149 COL12A1Q99715 3063 aa4.47□□□□□ -1.69
MCF2L2-212ENST00000488149 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
MCF2L2-212ENST00000488149 P0C880 135 aa4.44□□□□□ -1.7
MCF2L2-212ENST00000488149 ZZEF1O43149 2961 aa4.44□□□□□ -1.7
MCF2L2-212ENST00000488149 COL6A3P12111 3177 aa4.42□□□□□ -1.7
MCF2L2-212ENST00000488149 DCHS2Q6V1P9 2916 aa4.41□□□□□ -1.7
MCF2L2-212ENST00000488149 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
MCF2L2-212ENST00000488149 CFAP47Q6ZTR5 3102 aa4.39□□□□□ -1.71
MCF2L2-212ENST00000488149 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
MCF2L2-212ENST00000488149 KRTAP1-4P0C5Y4 121 aa4.36□□□□□ -1.71
MCF2L2-212ENST00000488149 TGP01266 2768 aa4.35□□□□□ -1.71
MCF2L2-212ENST00000488149 DMXL1Q9Y485 3027 aa4.34□□□□□ -1.72
MCF2L2-212ENST00000488149 SZT2Q5T011 3432 aa4.33□□□□□ -1.72
MCF2L2-212ENST00000488149 FBN2P35556 2912 aa4.33□□□□□ -1.72
MCF2L2-212ENST00000488149 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
MCF2L2-212ENST00000488149 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
MCF2L2-212ENST00000488149 CRYBG3Q68DQ2 2970 aa4.31□□□□□ -1.72
MCF2L2-212ENST00000488149 HRNRQ86YZ3 2850 aaPredicted RBP4.31□□□□□ -1.72
MCF2L2-212ENST00000488149 NF1P21359 2839 aa4.31□□□□□ -1.72
MCF2L2-212ENST00000488149 XP32Q5T750 250 aa4.3□□□□□ -1.72
MCF2L2-212ENST00000488149 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
MCF2L2-212ENST00000488149 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
MCF2L2-212ENST00000488149 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
MCF2L2-212ENST00000488149 SPEGQ15772 3267 aa4.24□□□□□ -1.73
MCF2L2-212ENST00000488149 USP34Q70CQ2 3546 aa4.22□□□□□ -1.73
MCF2L2-212ENST00000488149 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.73
MCF2L2-212ENST00000488149 PDZD2O15018 2839 aa4.21□□□□□ -1.74
MCF2L2-212ENST00000488149 EYSQ5T1H1 3165 aa4.2□□□□□ -1.74
MCF2L2-212ENST00000488149 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
MCF2L2-212ENST00000488149 MXRA5Q9NR99 2828 aa4.17□□□□□ -1.74
MCF2L2-212ENST00000488149 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
MCF2L2-212ENST00000488149 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
MCF2L2-212ENST00000488149 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
MCF2L2-212ENST00000488149 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
MCF2L2-212ENST00000488149 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
MCF2L2-212ENST00000488149 MYO15AQ9UKN7 3530 aa4.08□□□□□ -1.76
MCF2L2-212ENST00000488149 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
MCF2L2-212ENST00000488149 TENM2Q9NT68 2774 aa4.07□□□□□ -1.76
MCF2L2-212ENST00000488149 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
MCF2L2-212ENST00000488149 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
MCF2L2-212ENST00000488149 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
MCF2L2-212ENST00000488149 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
MCF2L2-212ENST00000488149 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
MCF2L2-212ENST00000488149 VWFP04275 2813 aa4.01□□□□□ -1.77
MCF2L2-212ENST00000488149 WDFY3Q8IZQ1 3526 aa4□□□□□ -1.77
MCF2L2-212ENST00000488149 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
MCF2L2-212ENST00000488149 DCHS1Q96JQ0 3298 aa3.97□□□□□ -1.77
MCF2L2-212ENST00000488149 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.77
MCF2L2-212ENST00000488149 SRRM2Q9UQ35 2752 aaKnown RBP3.92□□□□□ -1.78
MCF2L2-212ENST00000488149 RELNP78509 3460 aa3.92□□□□□ -1.78
MCF2L2-212ENST00000488149 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
MCF2L2-212ENST00000488149 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
MCF2L2-212ENST00000488149 CSMD1Q96PZ7 3565 aa3.9□□□□□ -1.78
MCF2L2-212ENST00000488149 INE1O15225 51 aa3.9□□□□□ -1.79
MCF2L2-212ENST00000488149 ZFHX4Q86UP3 3567 aa3.87□□□□□ -1.79
MCF2L2-212ENST00000488149 FBN1P35555 2871 aaKnown RBP3.86□□□□□ -1.79
MCF2L2-212ENST00000488149 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
MCF2L2-212ENST00000488149 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
MCF2L2-212ENST00000488149 KRTAP3-2Q9BYR7 98 aa3.83□□□□□ -1.8
MCF2L2-212ENST00000488149 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
MCF2L2-212ENST00000488149 LAMA5O15230 3695 aa3.78□□□□□ -1.8
MCF2L2-212ENST00000488149 SMG1Q96Q15 3661 aaKnown RBP3.76□□□□□ -1.81
MCF2L2-212ENST00000488149 NBPF19A0A087WUL8 3843 aa3.74□□□□□ -1.81
MCF2L2-212ENST00000488149 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.81
MCF2L2-212ENST00000488149 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
MCF2L2-212ENST00000488149 CUBNO60494 3623 aa3.69□□□□□ -1.82
MCF2L2-212ENST00000488149 SVEP1Q4LDE5 3571 aa3.69□□□□□ -1.82
MCF2L2-212ENST00000488149 ZFHX3Q15911 3703 aa3.65□□□□□ -1.83
MCF2L2-212ENST00000488149 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
MCF2L2-212ENST00000488149 TRRAPQ9Y4A5 3859 aa3.62□□□□□ -1.83
MCF2L2-212ENST00000488149 DMDP11532 3685 aa3.62□□□□□ -1.83
MCF2L2-212ENST00000488149 MUC3AQ02505 3323 aa3.61□□□□□ -1.83
MCF2L2-212ENST00000488149 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
MCF2L2-212ENST00000488149 SPENQ96T58 3664 aaKnown RBP3.6□□□□□ -1.83
MCF2L2-212ENST00000488149 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
MCF2L2-212ENST00000488149 ANK3Q12955 4377 aaKnown RBP3.56□□□□□ -1.84
MCF2L2-212ENST00000488149 KRTAP10-4P60372 401 aaPredicted RBP3.54□□□□□ -1.84
MCF2L2-212ENST00000488149 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
MCF2L2-212ENST00000488149 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
MCF2L2-212ENST00000488149 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
MCF2L2-212ENST00000488149 VPS13CQ709C8 3753 aa3.46□□□□□ -1.86
MCF2L2-212ENST00000488149 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
MCF2L2-212ENST00000488149 HUWE1Q7Z6Z7 4374 aaKnown RBP3.43□□□□□ -1.86
MCF2L2-212ENST00000488149 BSNQ9UPA5 3926 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 359.6 ms