RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
MCF2L2-212ENST00000488149 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
MCF2L2-212ENST00000488149 SUPT5HO00267 1087 aaKnown RBP13.31□□□□□ -0.28
MCF2L2-212ENST00000488149 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
MCF2L2-212ENST00000488149 MYT1Q01538 1121 aa12.98□□□□□ -0.33
MCF2L2-212ENST00000488149 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
MCF2L2-212ENST00000488149 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
MCF2L2-212ENST00000488149 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
MCF2L2-212ENST00000488149 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
MCF2L2-212ENST00000488149 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
MCF2L2-212ENST00000488149 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
MCF2L2-212ENST00000488149 APLP2Q06481 763 aa12.72□□□□□ -0.37
MCF2L2-212ENST00000488149 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
MCF2L2-212ENST00000488149 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
MCF2L2-212ENST00000488149 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.42
MCF2L2-212ENST00000488149 NEFLP07196 543 aa12.45□□□□□ -0.42
MCF2L2-212ENST00000488149 HRCP23327 699 aa12.43□□□□□ -0.42
MCF2L2-212ENST00000488149 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
MCF2L2-212ENST00000488149 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
MCF2L2-212ENST00000488149 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
MCF2L2-212ENST00000488149 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-212ENST00000488149 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
MCF2L2-212ENST00000488149 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
MCF2L2-212ENST00000488149 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
MCF2L2-212ENST00000488149 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
MCF2L2-212ENST00000488149 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
MCF2L2-212ENST00000488149 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.5
MCF2L2-212ENST00000488149 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.5
MCF2L2-212ENST00000488149 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
MCF2L2-212ENST00000488149 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
MCF2L2-212ENST00000488149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
MCF2L2-212ENST00000488149 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
MCF2L2-212ENST00000488149 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
MCF2L2-212ENST00000488149 ITGAEP38570 1179 aa11.79□□□□□ -0.52
MCF2L2-212ENST00000488149 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
MCF2L2-212ENST00000488149 POLR3GLQ9BT43 218 aa11.75□□□□□ -0.53
MCF2L2-212ENST00000488149 CDK11AQ9UQ88 783 aaPredicted RBP11.71□□□□□ -0.53
MCF2L2-212ENST00000488149 BCANQ96GW7 911 aa11.68□□□□□ -0.54
MCF2L2-212ENST00000488149 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
MCF2L2-212ENST00000488149 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
MCF2L2-212ENST00000488149 ANP32CO43423 234 aa11.6□□□□□ -0.55
MCF2L2-212ENST00000488149 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
MCF2L2-212ENST00000488149 ANP32AP39687 249 aaKnown RBP11.53□□□□□ -0.56
MCF2L2-212ENST00000488149 NEUROD1Q13562 356 aa11.49□□□□□ -0.57
MCF2L2-212ENST00000488149 FAM50AQ14320 339 aaKnown RBP11.48□□□□□ -0.57
MCF2L2-212ENST00000488149 EIF5BO60841 1220 aaKnown RBP11.44□□□□□ -0.58
MCF2L2-212ENST00000488149 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
MCF2L2-212ENST00000488149 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
MCF2L2-212ENST00000488149 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
MCF2L2-212ENST00000488149 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
MCF2L2-212ENST00000488149 FKBP8Q14318 412 aa11.41□□□□□ -0.58
MCF2L2-212ENST00000488149 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
MCF2L2-212ENST00000488149 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
MCF2L2-212ENST00000488149 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
MCF2L2-212ENST00000488149 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
MCF2L2-212ENST00000488149 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
MCF2L2-212ENST00000488149 ZNF326Q5BKZ1 582 aaKnown RBP11.28□□□□□ -0.6
MCF2L2-212ENST00000488149 HNRNPUQ00839 825 aaKnown RBP eCLIP11.26□□□□□ -0.61
MCF2L2-212ENST00000488149 NBR1Q14596 966 aa11.25□□□□□ -0.61
MCF2L2-212ENST00000488149 ANP32EQ9BTT0 268 aa11.23□□□□□ -0.61
MCF2L2-212ENST00000488149 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
MCF2L2-212ENST00000488149 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.62
MCF2L2-212ENST00000488149 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
MCF2L2-212ENST00000488149 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
MCF2L2-212ENST00000488149 MIER1Q8N108 512 aa11.19□□□□□ -0.62
MCF2L2-212ENST00000488149 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
MCF2L2-212ENST00000488149 HSP90AA1P07900 732 aaKnown RBP11.18□□□□□ -0.62
MCF2L2-212ENST00000488149 NEFMP07197 916 aa11.15□□□□□ -0.62
MCF2L2-212ENST00000488149 FAM9BQ8IZU0 186 aa11.15□□□□□ -0.63
MCF2L2-212ENST00000488149 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
MCF2L2-212ENST00000488149 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.09□□□□□ -0.63
MCF2L2-212ENST00000488149 CCDC180Q9P1Z9 1646 aa11.08□□□□□ -0.64
MCF2L2-212ENST00000488149 DDRGK1Q96HY6 314 aa11.08□□□□□ -0.64
MCF2L2-212ENST00000488149 TMC1Q8TDI8 760 aa11.07□□□□□ -0.64
MCF2L2-212ENST00000488149 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
MCF2L2-212ENST00000488149 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
MCF2L2-212ENST00000488149 ARXQ96QS3 562 aa11.04□□□□□ -0.64
MCF2L2-212ENST00000488149 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
MCF2L2-212ENST00000488149 BECN1Q14457 450 aa11.01□□□□□ -0.65
MCF2L2-212ENST00000488149 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
MCF2L2-212ENST00000488149 TRIM44Q96DX7 344 aaPredicted RBP11.01□□□□□ -0.65
MCF2L2-212ENST00000488149 PPM1GO15355 546 aaPredicted RBP11□□□□□ -0.65
MCF2L2-212ENST00000488149 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
MCF2L2-212ENST00000488149 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
MCF2L2-212ENST00000488149 TNNT2P45379 298 aaPredicted RBP10.97□□□□□ -0.65
MCF2L2-212ENST00000488149 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.66
MCF2L2-212ENST00000488149 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
MCF2L2-212ENST00000488149 WDR43Q15061 677 aaKnown RBP eCLIP10.95□□□□□ -0.66
MCF2L2-212ENST00000488149 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
MCF2L2-212ENST00000488149 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
MCF2L2-212ENST00000488149 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
MCF2L2-212ENST00000488149 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
MCF2L2-212ENST00000488149 GOLGA6L22H0YM25 854 aa10.92□□□□□ -0.66
MCF2L2-212ENST00000488149 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
MCF2L2-212ENST00000488149 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
MCF2L2-212ENST00000488149 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
MCF2L2-212ENST00000488149 NAP1L5Q96NT1 182 aaPredicted RBP10.88□□□□□ -0.67
MCF2L2-212ENST00000488149 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
MCF2L2-212ENST00000488149 DEKP35659 375 aaKnown RBP10.87□□□□□ -0.67
MCF2L2-212ENST00000488149 ABCC9O60706 1549 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms