RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
MDH1-211ENST00000484538 TNP1P09430 55 aa0.54□□□□□ -2.32
MDH1-211ENST00000484538 CHD7Q9P2D1 2997 aa0.54□□□□□ -2.32
MDH1-211ENST00000484538 DNAH8Q96JB1 4490 aa0.54□□□□□ -2.32
MDH1-211ENST00000484538 OTOGQ6ZRI0 2925 aa0.53□□□□□ -2.32
MDH1-211ENST00000484538 EP300Q09472 2414 aaPredicted RBP0.53□□□□□ -2.32
MDH1-211ENST00000484538 C9orf92A6NGG3 77 aa0.53□□□□□ -2.32
MDH1-211ENST00000484538 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
MDH1-211ENST00000484538 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
MDH1-211ENST00000484538 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
MDH1-211ENST00000484538 NCOR1O75376 2440 aa0.53□□□□□ -2.33
MDH1-211ENST00000484538 PRKDCP78527 4128 aaKnown RBP0.53□□□□□ -2.33
MDH1-211ENST00000484538 ATRQ13535 2644 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 BSNQ9UPA5 3926 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 CRYBG3Q68DQ2 2970 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
MDH1-211ENST00000484538 VWFP04275 2813 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 FAT2Q9NYQ8 4349 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 PKHD1L1Q86WI1 4243 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 SACSQ9NZJ4 4579 aa0.52□□□□□ -2.33
MDH1-211ENST00000484538 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
MDH1-211ENST00000484538 MAP1BP46821 2468 aaKnown RBP0.52□□□□□ -2.33
MDH1-211ENST00000484538 SETD2Q9BYW2 2564 aaPredicted RBP0.51□□□□□ -2.33
MDH1-211ENST00000484538 UBR5O95071 2799 aaPredicted RBP0.51□□□□□ -2.33
MDH1-211ENST00000484538 KMT2AQ03164 3969 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 NBASA2RRP1 2371 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 TNRC18O15417 2968 aaPredicted RBP0.51□□□□□ -2.33
MDH1-211ENST00000484538 SPART-AS1P0CW21 52 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 APELAP0DMC3 54 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 SZT2Q5T011 3432 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 CHD6Q8TD26 2715 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 RHPN1-AS1Q9BWJ2 59 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 DNAH3Q8TD57 4116 aa0.51□□□□□ -2.33
MDH1-211ENST00000484538 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
MDH1-211ENST00000484538 CHD8Q9HCK8 2581 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 LAMA5O15230 3695 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 APC2O95996 2303 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 ACACAQ13085 2346 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
MDH1-211ENST00000484538 RANBP2P49792 3224 aaKnown RBP0.5□□□□□ -2.33
MDH1-211ENST00000484538 ZFHX4Q86UP3 3567 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 RELNP78509 3460 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 EPG5Q9HCE0 2579 aa0.5□□□□□ -2.33
MDH1-211ENST00000484538 PTPN13Q12923 2485 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 MGAQ8IWI9 3026 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 SPENQ96T58 3664 aaKnown RBP0.49□□□□□ -2.33
MDH1-211ENST00000484538 TNXBP22105 4242 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 AKAP9Q99996 3911 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 DEFB1P60022 68 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 UNC79Q9P2D8 2635 aa0.49□□□□□ -2.33
MDH1-211ENST00000484538 HSPG2P98160 4391 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 SPTBN5Q9NRC6 3674 aaKnown RBP0.48□□□□□ -2.33
MDH1-211ENST00000484538 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 H3BNG1 76 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 HTN1P15515 57 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 DEFB124Q8NES8 71 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 HIVEP3Q5T1R4 2406 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 CEP250Q9BV73 2442 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 LYSTQ99698 3801 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 FRYQ5TBA9 3013 aa0.48□□□□□ -2.33
MDH1-211ENST00000484538 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
MDH1-211ENST00000484538 CCDC168Q8NDH2 2452 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 FAM186AA6NE01 2351 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 STATHP02808 62 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 COX14Q96I36 57 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 NCOR2Q9Y618 2525 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 CUBNO60494 3623 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 DNAH9Q9NYC9 4486 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 FAT3Q8TDW7 4589 aa0.47□□□□□ -2.33
MDH1-211ENST00000484538 CFAP54Q96N23 3096 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 COL12A1Q99715 3063 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 TENM2Q9NT68 2774 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
MDH1-211ENST00000484538 COL6A5A8TX70 2615 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 SPTBN4Q9H254 2564 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 NF1P21359 2839 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 A0A096LNI7 61 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 PRM1P04553 51 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 DEFB136Q30KP8 78 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 APOBP04114 4563 aaKnown RBP0.46□□□□□ -2.34
MDH1-211ENST00000484538 FLNCQ14315 2725 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 MKI67P46013 3256 aaKnown RBP0.46□□□□□ -2.34
MDH1-211ENST00000484538 FRYLO94915 3013 aa0.46□□□□□ -2.34
MDH1-211ENST00000484538 PKD1P98161 4303 aa0.45□□□□□ -2.34
MDH1-211ENST00000484538 NSD1Q96L73 2696 aaPredicted RBP0.45□□□□□ -2.34
MDH1-211ENST00000484538 KMT2DO14686 5537 aa0.45□□□□□ -2.34
MDH1-211ENST00000484538 TRIOO75962 3097 aa0.45□□□□□ -2.34
MDH1-211ENST00000484538 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 PDZD2O15018 2839 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 PKD1L1Q8TDX9 2849 aa0.44□□□□□ -2.34
MDH1-211ENST00000484538 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms