RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
BRCA1-216ENST00000484087 SPRR4Q96PI1 79 aa4.19□□□□□ -1.74
BRCA1-216ENST00000484087 A0A1W2PNM2 257 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 BPY2O14599 106 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 CRYGAP11844 174 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 IGFL1Q6UW32 110 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 ATOX1O00244 68 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
BRCA1-216ENST00000484087 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
BRCA1-216ENST00000484087 KRTAP3-1Q9BYR8 98 aa4.16□□□□□ -1.74
BRCA1-216ENST00000484087 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.74
BRCA1-216ENST00000484087 A0A087WVE0 104 aa4.15□□□□□ -1.75
BRCA1-216ENST00000484087 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
BRCA1-216ENST00000484087 OXTP01178 125 aa4.15□□□□□ -1.75
BRCA1-216ENST00000484087 A0A087WSZ3 146 aa4.14□□□□□ -1.75
BRCA1-216ENST00000484087 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
BRCA1-216ENST00000484087 LRP2P98164 4655 aa4.12□□□□□ -1.75
BRCA1-216ENST00000484087 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
BRCA1-216ENST00000484087 MOBPQ13875 183 aa4.11□□□□□ -1.75
BRCA1-216ENST00000484087 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
BRCA1-216ENST00000484087 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
BRCA1-216ENST00000484087 PRR26Q8N8Z3 221 aa4.11□□□□□ -1.75
BRCA1-216ENST00000484087 LPAP08519 4548 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 J3KT08 172 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 UQCRQO14949 82 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 SSBP3-AS1Q7Z2R9 100 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
BRCA1-216ENST00000484087 KRTAP1-4P0C5Y4 121 aa4.09□□□□□ -1.75
BRCA1-216ENST00000484087 COX7CP15954 63 aa4.09□□□□□ -1.75
BRCA1-216ENST00000484087 FAM229BQ4G0N7 80 aa4.09□□□□□ -1.75
BRCA1-216ENST00000484087 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
BRCA1-216ENST00000484087 NDUFB1O75438 58 aa4.08□□□□□ -1.76
BRCA1-216ENST00000484087 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
BRCA1-216ENST00000484087 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
BRCA1-216ENST00000484087 Q8N9L7 120 aa4.08□□□□□ -1.76
BRCA1-216ENST00000484087 DSCR10P59022 87 aa4.07□□□□□ -1.76
BRCA1-216ENST00000484087 CD164Q04900 197 aa4.07□□□□□ -1.76
BRCA1-216ENST00000484087 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
BRCA1-216ENST00000484087 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
BRCA1-216ENST00000484087 K7EQZ3 153 aa4.06□□□□□ -1.76
BRCA1-216ENST00000484087 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
BRCA1-216ENST00000484087 A8MWP4 228 aa4.05□□□□□ -1.76
BRCA1-216ENST00000484087 HCG22E2RYF7 251 aa4.05□□□□□ -1.76
BRCA1-216ENST00000484087 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
BRCA1-216ENST00000484087 A0A087X002 238 aa4.05□□□□□ -1.76
BRCA1-216ENST00000484087 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
BRCA1-216ENST00000484087 PRR15Q8IV56 129 aa4.04□□□□□ -1.76
BRCA1-216ENST00000484087 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
BRCA1-216ENST00000484087 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
BRCA1-216ENST00000484087 LIMD2Q9BT23 127 aa4.02□□□□□ -1.77
BRCA1-216ENST00000484087 ASB16-AS1Q495Z4 193 aa4.01□□□□□ -1.77
BRCA1-216ENST00000484087 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
BRCA1-216ENST00000484087 CASC2Q6XLA1 102 aa4.01□□□□□ -1.77
BRCA1-216ENST00000484087 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
BRCA1-216ENST00000484087 MPLKIPQ8TAP9 179 aa4.01□□□□□ -1.77
BRCA1-216ENST00000484087 C20orf197Q8N268 126 aa4□□□□□ -1.77
BRCA1-216ENST00000484087 Q96NJ1 140 aa4□□□□□ -1.77
BRCA1-216ENST00000484087 OCR1Q9BZK8 76 aa4□□□□□ -1.77
BRCA1-216ENST00000484087 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
BRCA1-216ENST00000484087 Q5XG85 94 aa3.99□□□□□ -1.77
BRCA1-216ENST00000484087 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 SPINK1P00995 79 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 SPAG11AQ6PDA7 123 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 IGHV6-1A0A0B4J1U7 121 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 NDUFC1O43677 76 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 Q75L30 129 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 TMEM254Q8TBM7 123 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
BRCA1-216ENST00000484087 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
BRCA1-216ENST00000484087 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
BRCA1-216ENST00000484087 MP68P56378 58 aa3.97□□□□□ -1.77
BRCA1-216ENST00000484087 TMEM258P61165 79 aa3.96□□□□□ -1.78
BRCA1-216ENST00000484087 PRR4Q16378 134 aa3.96□□□□□ -1.78
BRCA1-216ENST00000484087 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.78
BRCA1-216ENST00000484087 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
BRCA1-216ENST00000484087 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
BRCA1-216ENST00000484087 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
BRCA1-216ENST00000484087 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
BRCA1-216ENST00000484087 H3BPC8 53 aa3.93□□□□□ -1.78
BRCA1-216ENST00000484087 NDUFS5O43920 106 aa3.93□□□□□ -1.78
BRCA1-216ENST00000484087 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
BRCA1-216ENST00000484087 MUC2Q02817 5179 aa3.93□□□□□ -1.78
BRCA1-216ENST00000484087 A0A0U1RQV1 116 aa3.92□□□□□ -1.78
BRCA1-216ENST00000484087 LINC00313P59037 77 aa3.92□□□□□ -1.78
BRCA1-216ENST00000484087 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
BRCA1-216ENST00000484087 H0Y9P7 68 aa3.92□□□□□ -1.78
BRCA1-216ENST00000484087 CYSTM1Q9H1C7 97 aa3.92□□□□□ -1.78
BRCA1-216ENST00000484087 FAM236DA0A1B0GTK5 79 aa3.91□□□□□ -1.78
BRCA1-216ENST00000484087 H7BZZ5 65 aa3.91□□□□□ -1.78
BRCA1-216ENST00000484087 FAM236CP0DP71 79 aa3.91□□□□□ -1.78
BRCA1-216ENST00000484087 ATP5EP56381 51 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-216ENST00000484087 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
BRCA1-216ENST00000484087 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
BRCA1-216ENST00000484087 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
BRCA1-216ENST00000484087 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms