RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 H0YAA0 97 aa7.23□□□□□ -1.25
MCF2L-225ENST00000480321 TACC2O95359 2948 aa7.23□□□□□ -1.25
MCF2L-225ENST00000480321 UTP20O75691 2785 aaKnown RBP7.23□□□□□ -1.25
MCF2L-225ENST00000480321 FLNCQ14315 2725 aa7.23□□□□□ -1.25
MCF2L-225ENST00000480321 KALRNO60229 2985 aa7.22□□□□□ -1.25
MCF2L-225ENST00000480321 CELSR3Q9NYQ7 3312 aa7.21□□□□□ -1.25
MCF2L-225ENST00000480321 XP32Q5T750 250 aa7.21□□□□□ -1.25
MCF2L-225ENST00000480321 APCP25054 2843 aa7.21□□□□□ -1.26
MCF2L-225ENST00000480321 HIVEP1P15822 2718 aa7.17□□□□□ -1.26
MCF2L-225ENST00000480321 TENM4Q6N022 2769 aa7.16□□□□□ -1.26
MCF2L-225ENST00000480321 ATMQ13315 3056 aa7.15□□□□□ -1.26
MCF2L-225ENST00000480321 KRTAP10-10P60014 251 aa7.15□□□□□ -1.27
MCF2L-225ENST00000480321 DMXL2Q8TDJ6 3036 aa7.15□□□□□ -1.27
MCF2L-225ENST00000480321 P0C880 135 aa7.14□□□□□ -1.27
MCF2L-225ENST00000480321 CRYBG3Q68DQ2 2970 aa7.14□□□□□ -1.27
MCF2L-225ENST00000480321 COL12A1Q99715 3063 aa7.13□□□□□ -1.27
MCF2L-225ENST00000480321 ASH1LQ9NR48 2969 aaKnown RBP7.11□□□□□ -1.27
MCF2L-225ENST00000480321 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
MCF2L-225ENST00000480321 LRBAP50851 2863 aa7.08□□□□□ -1.28
MCF2L-225ENST00000480321 NBEAQ8NFP9 2946 aa7.08□□□□□ -1.28
MCF2L-225ENST00000480321 DNAH14Q0VDD8 3507 aa7.07□□□□□ -1.28
MCF2L-225ENST00000480321 FRYLO94915 3013 aa7.05□□□□□ -1.28
MCF2L-225ENST00000480321 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
MCF2L-225ENST00000480321 SZT2Q5T011 3432 aa7.05□□□□□ -1.28
MCF2L-225ENST00000480321 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
MCF2L-225ENST00000480321 NIPBLQ6KC79 2804 aaeCLIP7.02□□□□□ -1.29
MCF2L-225ENST00000480321 LAMA1P25391 3075 aa7.02□□□□□ -1.29
MCF2L-225ENST00000480321 VCANP13611 3396 aa7.02□□□□□ -1.29
MCF2L-225ENST00000480321 ADGRG4Q8IZF6 3080 aa6.99□□□□□ -1.29
MCF2L-225ENST00000480321 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
MCF2L-225ENST00000480321 BOD1L1Q8NFC6 3051 aa6.95□□□□□ -1.3
MCF2L-225ENST00000480321 TENM3Q9P273 2699 aa6.95□□□□□ -1.3
MCF2L-225ENST00000480321 COL6A3P12111 3177 aa6.95□□□□□ -1.3
MCF2L-225ENST00000480321 ZZEF1O43149 2961 aa6.91□□□□□ -1.3
MCF2L-225ENST00000480321 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.3
MCF2L-225ENST00000480321 EYSQ5T1H1 3165 aa6.9□□□□□ -1.3
MCF2L-225ENST00000480321 DCHS2Q6V1P9 2916 aa6.9□□□□□ -1.31
MCF2L-225ENST00000480321 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
MCF2L-225ENST00000480321 SPTBN5Q9NRC6 3674 aaKnown RBP6.79□□□□□ -1.32
MCF2L-225ENST00000480321 ZANQ9Y493 2812 aa6.76□□□□□ -1.33
MCF2L-225ENST00000480321 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
MCF2L-225ENST00000480321 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
MCF2L-225ENST00000480321 SPEGQ15772 3267 aa6.73□□□□□ -1.33
MCF2L-225ENST00000480321 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
MCF2L-225ENST00000480321 NF1P21359 2839 aa6.72□□□□□ -1.33
MCF2L-225ENST00000480321 USP34Q70CQ2 3546 aa6.7□□□□□ -1.34
MCF2L-225ENST00000480321 TNRC18O15417 2968 aaPredicted RBP6.68□□□□□ -1.34
MCF2L-225ENST00000480321 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
MCF2L-225ENST00000480321 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
MCF2L-225ENST00000480321 FBN2P35556 2912 aa6.62□□□□□ -1.35
MCF2L-225ENST00000480321 TGP01266 2768 aa6.61□□□□□ -1.35
MCF2L-225ENST00000480321 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
MCF2L-225ENST00000480321 DMXL1Q9Y485 3027 aa6.59□□□□□ -1.35
MCF2L-225ENST00000480321 CELSR1Q9NYQ6 3014 aa6.59□□□□□ -1.35
MCF2L-225ENST00000480321 PDZD2O15018 2839 aa6.56□□□□□ -1.36
MCF2L-225ENST00000480321 MYO15AQ9UKN7 3530 aa6.56□□□□□ -1.36
MCF2L-225ENST00000480321 PKD1L1Q8TDX9 2849 aa6.54□□□□□ -1.36
MCF2L-225ENST00000480321 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
MCF2L-225ENST00000480321 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
MCF2L-225ENST00000480321 LOC400499M0QZD8 3231 aa6.45□□□□□ -1.38
MCF2L-225ENST00000480321 VWFP04275 2813 aa6.42□□□□□ -1.38
MCF2L-225ENST00000480321 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
MCF2L-225ENST00000480321 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
MCF2L-225ENST00000480321 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
MCF2L-225ENST00000480321 WDFY3Q8IZQ1 3526 aa6.31□□□□□ -1.4
MCF2L-225ENST00000480321 INE1O15225 51 aa6.28□□□□□ -1.4
MCF2L-225ENST00000480321 RELNP78509 3460 aa6.25□□□□□ -1.41
MCF2L-225ENST00000480321 DCHS1Q96JQ0 3298 aa6.24□□□□□ -1.41
MCF2L-225ENST00000480321 KRTAP3-2Q9BYR7 98 aa6.24□□□□□ -1.41
MCF2L-225ENST00000480321 ASPMQ8IZT6 3477 aa6.23□□□□□ -1.41
MCF2L-225ENST00000480321 ZFHX4Q86UP3 3567 aa6.21□□□□□ -1.42
MCF2L-225ENST00000480321 NBPF19A0A087WUL8 3843 aa6.2□□□□□ -1.42
MCF2L-225ENST00000480321 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
MCF2L-225ENST00000480321 FBN3Q75N90 2809 aa6.19□□□□□ -1.42
MCF2L-225ENST00000480321 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
MCF2L-225ENST00000480321 LAMA5O15230 3695 aa6.15□□□□□ -1.43
MCF2L-225ENST00000480321 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
MCF2L-225ENST00000480321 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
MCF2L-225ENST00000480321 DMDP11532 3685 aa6.08□□□□□ -1.44
MCF2L-225ENST00000480321 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
MCF2L-225ENST00000480321 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
MCF2L-225ENST00000480321 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
MCF2L-225ENST00000480321 ANK3Q12955 4377 aaKnown RBP6.03□□□□□ -1.44
MCF2L-225ENST00000480321 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
MCF2L-225ENST00000480321 ZFHX3Q15911 3703 aa6.01□□□□□ -1.45
MCF2L-225ENST00000480321 MEGF8Q7Z7M0 2845 aa5.99□□□□□ -1.45
MCF2L-225ENST00000480321 SMG1Q96Q15 3661 aaKnown RBP5.98□□□□□ -1.45
MCF2L-225ENST00000480321 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
MCF2L-225ENST00000480321 MUC3AQ02505 3323 aa5.91□□□□□ -1.46
MCF2L-225ENST00000480321 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
MCF2L-225ENST00000480321 KRTAP12-3P60328 96 aa5.9□□□□□ -1.47
MCF2L-225ENST00000480321 SVEP1Q4LDE5 3571 aa5.87□□□□□ -1.47
MCF2L-225ENST00000480321 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
MCF2L-225ENST00000480321 HUWE1Q7Z6Z7 4374 aaKnown RBP5.77□□□□□ -1.49
MCF2L-225ENST00000480321 CUBNO60494 3623 aa5.77□□□□□ -1.49
MCF2L-225ENST00000480321 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
MCF2L-225ENST00000480321 TRRAPQ9Y4A5 3859 aa5.75□□□□□ -1.49
MCF2L-225ENST00000480321 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
MCF2L-225ENST00000480321 SPENQ96T58 3664 aaKnown RBP5.73□□□□□ -1.49
MCF2L-225ENST00000480321 CSMD2Q7Z408 3487 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms