RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 PRAC1Q96KF2 57 aa10□□□□□ -0.81
NOTCH4-204ENST00000474612 BOD1L1Q8NFC6 3051 aa10□□□□□ -0.81
NOTCH4-204ENST00000474612 A8MUU9 505 aa9.99□□□□□ -0.81
NOTCH4-204ENST00000474612 KALRNO60229 2985 aa9.97□□□□□ -0.81
NOTCH4-204ENST00000474612 LRBAP50851 2863 aa9.97□□□□□ -0.81
NOTCH4-204ENST00000474612 NBEAQ8NFP9 2946 aa9.96□□□□□ -0.81
NOTCH4-204ENST00000474612 ADGRG4Q8IZF6 3080 aa9.94□□□□□ -0.82
NOTCH4-204ENST00000474612 DMXL2Q8TDJ6 3036 aa9.93□□□□□ -0.82
NOTCH4-204ENST00000474612 CRYBG3Q68DQ2 2970 aa9.92□□□□□ -0.82
NOTCH4-204ENST00000474612 COL6A3P12111 3177 aa9.92□□□□□ -0.82
NOTCH4-204ENST00000474612 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
NOTCH4-204ENST00000474612 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
NOTCH4-204ENST00000474612 CELSR2Q9HCU4 2923 aa9.82□□□□□ -0.84
NOTCH4-204ENST00000474612 A0A0A0MQY5 61 aa9.79□□□□□ -0.84
NOTCH4-204ENST00000474612 KRTAP1-4P0C5Y4 121 aa9.79□□□□□ -0.84
NOTCH4-204ENST00000474612 H3BS24 57 aa9.78□□□□□ -0.84
NOTCH4-204ENST00000474612 SPTBN5Q9NRC6 3674 aaKnown RBP9.78□□□□□ -0.84
NOTCH4-204ENST00000474612 ASH1LQ9NR48 2969 aaKnown RBP9.76□□□□□ -0.85
NOTCH4-204ENST00000474612 DCHS2Q6V1P9 2916 aa9.74□□□□□ -0.85
NOTCH4-204ENST00000474612 SPEGQ15772 3267 aa9.73□□□□□ -0.85
NOTCH4-204ENST00000474612 TNRC18O15417 2968 aaPredicted RBP9.73□□□□□ -0.85
NOTCH4-204ENST00000474612 XP32Q5T750 250 aa9.72□□□□□ -0.85
NOTCH4-204ENST00000474612 A8MU10 97 aa9.7□□□□□ -0.86
NOTCH4-204ENST00000474612 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
NOTCH4-204ENST00000474612 ZANQ9Y493 2812 aa9.67□□□□□ -0.86
NOTCH4-204ENST00000474612 CFAP47Q6ZTR5 3102 aa9.67□□□□□ -0.86
NOTCH4-204ENST00000474612 DMXL1Q9Y485 3027 aa9.62□□□□□ -0.87
NOTCH4-204ENST00000474612 TNP1P09430 55 aa9.61□□□□□ -0.87
NOTCH4-204ENST00000474612 TENM3Q9P273 2699 aa9.6□□□□□ -0.87
NOTCH4-204ENST00000474612 USP34Q70CQ2 3546 aa9.58□□□□□ -0.88
NOTCH4-204ENST00000474612 NF1P21359 2839 aa9.56□□□□□ -0.88
NOTCH4-204ENST00000474612 TENM1Q9UKZ4 2725 aa9.56□□□□□ -0.88
NOTCH4-204ENST00000474612 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
NOTCH4-204ENST00000474612 LOC400499M0QZD8 3231 aa9.48□□□□□ -0.89
NOTCH4-204ENST00000474612 KRTAP25-1Q3LHN0 102 aa9.47□□□□□ -0.89
NOTCH4-204ENST00000474612 A0A1B0GVY2 172 aa9.46□□□□□ -0.9
NOTCH4-204ENST00000474612 HRNRQ86YZ3 2850 aaPredicted RBP9.45□□□□□ -0.9
NOTCH4-204ENST00000474612 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
NOTCH4-204ENST00000474612 A6NN06 94 aa9.42□□□□□ -0.9
NOTCH4-204ENST00000474612 KRTAP10-8P60410 259 aa9.41□□□□□ -0.9
NOTCH4-204ENST00000474612 MYO15AQ9UKN7 3530 aa9.4□□□□□ -0.9
NOTCH4-204ENST00000474612 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
NOTCH4-204ENST00000474612 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
NOTCH4-204ENST00000474612 KRTAP16-1A8MUX0 517 aa9.35□□□□□ -0.91
NOTCH4-204ENST00000474612 FBN2P35556 2912 aa9.34□□□□□ -0.91
NOTCH4-204ENST00000474612 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
NOTCH4-204ENST00000474612 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
NOTCH4-204ENST00000474612 PKD1L1Q8TDX9 2849 aa9.2□□□□□ -0.94
NOTCH4-204ENST00000474612 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
NOTCH4-204ENST00000474612 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
NOTCH4-204ENST00000474612 RELNP78509 3460 aa9.11□□□□□ -0.95
NOTCH4-204ENST00000474612 NDUFAF8A1L188 74 aa9.05□□□□□ -0.96
NOTCH4-204ENST00000474612 H0YAA0 97 aa9.05□□□□□ -0.96
NOTCH4-204ENST00000474612 WDFY3Q8IZQ1 3526 aa9.05□□□□□ -0.96
NOTCH4-204ENST00000474612 PDZD2O15018 2839 aa9.04□□□□□ -0.96
NOTCH4-204ENST00000474612 P0C880 135 aa9.03□□□□□ -0.96
NOTCH4-204ENST00000474612 TGP01266 2768 aa8.99□□□□□ -0.97
NOTCH4-204ENST00000474612 VWFP04275 2813 aa8.98□□□□□ -0.97
NOTCH4-204ENST00000474612 DCHS1Q96JQ0 3298 aa8.98□□□□□ -0.97
NOTCH4-204ENST00000474612 LAMA5O15230 3695 aa8.94□□□□□ -0.98
NOTCH4-204ENST00000474612 ASPMQ8IZT6 3477 aa8.89□□□□□ -0.99
NOTCH4-204ENST00000474612 ZFHX4Q86UP3 3567 aa8.88□□□□□ -0.99
NOTCH4-204ENST00000474612 OTOGQ6ZRI0 2925 aa8.83□□□□□ -1
NOTCH4-204ENST00000474612 DMDP11532 3685 aa8.78□□□□□ -1
NOTCH4-204ENST00000474612 MUC3AQ02505 3323 aa8.77□□□□□ -1.01
NOTCH4-204ENST00000474612 FBN1P35555 2871 aaKnown RBP8.71□□□□□ -1.02
NOTCH4-204ENST00000474612 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
NOTCH4-204ENST00000474612 NBPF19A0A087WUL8 3843 aa8.62□□□□□ -1.03
NOTCH4-204ENST00000474612 CSMD1Q96PZ7 3565 aa8.61□□□□□ -1.03
NOTCH4-204ENST00000474612 SMG1Q96Q15 3661 aaKnown RBP8.58□□□□□ -1.04
NOTCH4-204ENST00000474612 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
NOTCH4-204ENST00000474612 MT1HL1P0DM35 61 aa8.56□□□□□ -1.04
NOTCH4-204ENST00000474612 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
NOTCH4-204ENST00000474612 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
NOTCH4-204ENST00000474612 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
NOTCH4-204ENST00000474612 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
NOTCH4-204ENST00000474612 ZFHX3Q15911 3703 aa8.46□□□□□ -1.05
NOTCH4-204ENST00000474612 SVEP1Q4LDE5 3571 aa8.42□□□□□ -1.06
NOTCH4-204ENST00000474612 ANK3Q12955 4377 aaKnown RBP8.39□□□□□ -1.07
NOTCH4-204ENST00000474612 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
NOTCH4-204ENST00000474612 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
NOTCH4-204ENST00000474612 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
NOTCH4-204ENST00000474612 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
NOTCH4-204ENST00000474612 SPENQ96T58 3664 aaKnown RBP8.28□□□□□ -1.08
NOTCH4-204ENST00000474612 CUBNO60494 3623 aa8.27□□□□□ -1.09
NOTCH4-204ENST00000474612 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
NOTCH4-204ENST00000474612 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
NOTCH4-204ENST00000474612 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
NOTCH4-204ENST00000474612 TRRAPQ9Y4A5 3859 aa8.13□□□□□ -1.11
NOTCH4-204ENST00000474612 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
NOTCH4-204ENST00000474612 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
NOTCH4-204ENST00000474612 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
NOTCH4-204ENST00000474612 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
NOTCH4-204ENST00000474612 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
NOTCH4-204ENST00000474612 ALMS1Q8TCU4 4167 aa7.88□□□□□ -1.15
NOTCH4-204ENST00000474612 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
NOTCH4-204ENST00000474612 CRCT1Q9UGL9 99 aa7.72□□□□□ -1.17
NOTCH4-204ENST00000474612 KRTAP12-3P60328 96 aa7.71□□□□□ -1.17
NOTCH4-204ENST00000474612 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
NOTCH4-204ENST00000474612 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms