RNA–Protein interactions for RNA: ENST00000471302.2

TTC13-204, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 4

Gene TTC13, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-204ENST00000471302 APC2O95996 2303 aa0.89□□□□□ -2.27
TTC13-204ENST00000471302 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
TTC13-204ENST00000471302 SPTBN4Q9H254 2564 aa0.88□□□□□ -2.27
TTC13-204ENST00000471302 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
TTC13-204ENST00000471302 SYNE2Q8WXH0 6885 aaKnown RBP0.87□□□□□ -2.27
TTC13-204ENST00000471302 TENM3Q9P273 2699 aa0.87□□□□□ -2.27
TTC13-204ENST00000471302 U3KQA8 63 aa0.86□□□□□ -2.27
TTC13-204ENST00000471302 UBR5O95071 2799 aaPredicted RBP0.85□□□□□ -2.27
TTC13-204ENST00000471302 VWFP04275 2813 aa0.84□□□□□ -2.27
TTC13-204ENST00000471302 DEFB136Q30KP8 78 aa0.84□□□□□ -2.27
TTC13-204ENST00000471302 ABCA2Q9BZC7 2435 aa0.84□□□□□ -2.28
TTC13-204ENST00000471302 COL6A5A8TX70 2615 aa0.84□□□□□ -2.28
TTC13-204ENST00000471302 FSIP2Q5CZC0 6907 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 A0A096LNI7 61 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 DEFB135Q30KP9 77 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 DEFB133Q30KQ1 61 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 KRTAP8-1Q8IUC2 63 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 TNRC18O15417 2968 aaPredicted RBP0.83□□□□□ -2.28
TTC13-204ENST00000471302 NCOR1O75376 2440 aa0.83□□□□□ -2.28
TTC13-204ENST00000471302 WDR87Q6ZQQ6 2873 aa0.82□□□□□ -2.28
TTC13-204ENST00000471302 PRRC2CQ9Y520 2896 aaKnown RBP0.82□□□□□ -2.28
TTC13-204ENST00000471302 OTOGQ6ZRI0 2925 aa0.82□□□□□ -2.28
TTC13-204ENST00000471302 TENM4Q6N022 2769 aa0.81□□□□□ -2.28
TTC13-204ENST00000471302 DSPP15924 2871 aaKnown RBP0.81□□□□□ -2.28
TTC13-204ENST00000471302 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
TTC13-204ENST00000471302 REV3LO60673 3130 aa0.81□□□□□ -2.28
TTC13-204ENST00000471302 MGAQ8IWI9 3026 aa0.81□□□□□ -2.28
TTC13-204ENST00000471302 NAV2Q8IVL1 2488 aa0.8□□□□□ -2.28
TTC13-204ENST00000471302 ZFYVE26Q68DK2 2539 aa0.8□□□□□ -2.28
TTC13-204ENST00000471302 PTPN13Q12923 2485 aa0.8□□□□□ -2.28
TTC13-204ENST00000471302 CHD6Q8TD26 2715 aa0.8□□□□□ -2.28
TTC13-204ENST00000471302 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
TTC13-204ENST00000471302 M0R2T5 61 aa0.79□□□□□ -2.28
TTC13-204ENST00000471302 CEP290O15078 2479 aa0.79□□□□□ -2.28
TTC13-204ENST00000471302 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
TTC13-204ENST00000471302 CEP250Q9BV73 2442 aa0.78□□□□□ -2.28
TTC13-204ENST00000471302 PKD1L2Q7Z442 2459 aa0.78□□□□□ -2.28
TTC13-204ENST00000471302 ATRQ13535 2644 aa0.78□□□□□ -2.28
TTC13-204ENST00000471302 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
TTC13-204ENST00000471302 CCDC168Q8NDH2 2452 aa0.77□□□□□ -2.29
TTC13-204ENST00000471302 USP24Q9UPU5 2620 aa0.77□□□□□ -2.29
TTC13-204ENST00000471302 CEP350Q5VT06 3117 aa0.77□□□□□ -2.29
TTC13-204ENST00000471302 HIVEP3Q5T1R4 2406 aa0.77□□□□□ -2.29
TTC13-204ENST00000471302 ANKHD1Q8IWZ3 2542 aaKnown RBP0.76□□□□□ -2.29
TTC13-204ENST00000471302 NCOR2Q9Y618 2525 aa0.75□□□□□ -2.29
TTC13-204ENST00000471302 CACNA1AO00555 2505 aa0.74□□□□□ -2.29
TTC13-204ENST00000471302 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
TTC13-204ENST00000471302 DMBT1Q9UGM3 2413 aaPredicted RBP0.74□□□□□ -2.29
TTC13-204ENST00000471302 MAP1AP78559 2803 aaPredicted RBP0.73□□□□□ -2.29
TTC13-204ENST00000471302 LRRK2Q5S007 2527 aa0.73□□□□□ -2.29
TTC13-204ENST00000471302 TRANK1O15050 2925 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 COL6A3P12111 3177 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 ITPR1Q14643 2758 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 SRRM2Q9UQ35 2752 aaKnown RBP0.72□□□□□ -2.29
TTC13-204ENST00000471302 CELSR1Q9NYQ6 3014 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 BSNQ9UPA5 3926 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 CREBBPQ92793 2442 aa0.72□□□□□ -2.29
TTC13-204ENST00000471302 SPG11Q96JI7 2443 aa0.71□□□□□ -2.3
TTC13-204ENST00000471302 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.3
TTC13-204ENST00000471302 ACANP16112 2415 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 ZZEF1O43149 2961 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 MT1AP04731 61 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 VPS13DQ5THJ4 4388 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 CHD8Q9HCK8 2581 aa0.7□□□□□ -2.3
TTC13-204ENST00000471302 SONP18583 2426 aaKnown RBP0.69□□□□□ -2.3
TTC13-204ENST00000471302 LRBAP50851 2863 aa0.69□□□□□ -2.3
TTC13-204ENST00000471302 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
TTC13-204ENST00000471302 FRYLO94915 3013 aa0.68□□□□□ -2.3
TTC13-204ENST00000471302 CENPEQ02224 2701 aa0.68□□□□□ -2.3
TTC13-204ENST00000471302 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
TTC13-204ENST00000471302 HTN3P15516 51 aa0.67□□□□□ -2.3
TTC13-204ENST00000471302 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
TTC13-204ENST00000471302 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
TTC13-204ENST00000471302 USP9YO00507 2555 aaPredicted RBP0.67□□□□□ -2.3
TTC13-204ENST00000471302 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
TTC13-204ENST00000471302 COL12A1Q99715 3063 aa0.67□□□□□ -2.3
TTC13-204ENST00000471302 HECTD1Q9ULT8 2610 aa0.67□□□□□ -2.3
TTC13-204ENST00000471302 NSD1Q96L73 2696 aaPredicted RBP0.66□□□□□ -2.3
TTC13-204ENST00000471302 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
TTC13-204ENST00000471302 AKAP13Q12802 2813 aa0.66□□□□□ -2.3
TTC13-204ENST00000471302 SETXQ7Z333 2677 aaKnown RBP0.66□□□□□ -2.3
TTC13-204ENST00000471302 UTP20O75691 2785 aaKnown RBP0.66□□□□□ -2.3
TTC13-204ENST00000471302 SRCAPQ6ZRS2 3230 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 CRYBG3Q68DQ2 2970 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 BOD1L1Q8NFC6 3051 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 PRUNE2Q8WUY3 3088 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 CFAP54Q96N23 3096 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 SPRR2BP35325 72 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 DOPEY1Q5JWR5 2465 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 FLNCQ14315 2725 aa0.65□□□□□ -2.31
TTC13-204ENST00000471302 TGP01266 2768 aa0.64□□□□□ -2.31
TTC13-204ENST00000471302 SPRR2AP35326 72 aa0.64□□□□□ -2.31
TTC13-204ENST00000471302 COL7A1Q02388 2944 aa0.64□□□□□ -2.31
TTC13-204ENST00000471302 FAT2Q9NYQ8 4349 aa0.63□□□□□ -2.31
TTC13-204ENST00000471302 STAB1Q9NY15 2570 aa0.63□□□□□ -2.31
TTC13-204ENST00000471302 AKAP9Q99996 3911 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms