RNA–Protein interactions for RNA: ENST00000471302.2

TTC13-204, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 4

Gene TTC13, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-204ENST00000471302 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
TTC13-204ENST00000471302 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
TTC13-204ENST00000471302 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
TTC13-204ENST00000471302 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
TTC13-204ENST00000471302 FOXD1Q16676 465 aa21.12■□□□□ 0.97
TTC13-204ENST00000471302 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
TTC13-204ENST00000471302 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
TTC13-204ENST00000471302 ADRA2BP18089 450 aa19.95■□□□□ 0.78
TTC13-204ENST00000471302 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
TTC13-204ENST00000471302 MSH5O43196 834 aa19.65■□□□□ 0.74
TTC13-204ENST00000471302 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
TTC13-204ENST00000471302 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
TTC13-204ENST00000471302 MAPK8IP2Q13387 824 aaPredicted RBP18.22■□□□□ 0.51
TTC13-204ENST00000471302 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
TTC13-204ENST00000471302 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
TTC13-204ENST00000471302 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
TTC13-204ENST00000471302 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
TTC13-204ENST00000471302 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
TTC13-204ENST00000471302 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
TTC13-204ENST00000471302 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
TTC13-204ENST00000471302 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
TTC13-204ENST00000471302 KCNA4P22459 653 aa17.2■□□□□ 0.34
TTC13-204ENST00000471302 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
TTC13-204ENST00000471302 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
TTC13-204ENST00000471302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
TTC13-204ENST00000471302 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
TTC13-204ENST00000471302 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
TTC13-204ENST00000471302 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
TTC13-204ENST00000471302 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
TTC13-204ENST00000471302 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
TTC13-204ENST00000471302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
TTC13-204ENST00000471302 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
TTC13-204ENST00000471302 APLP2Q06481 763 aa16.06■□□□□ 0.16
TTC13-204ENST00000471302 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
TTC13-204ENST00000471302 CAPN15O75808 1086 aa16.01■□□□□ 0.15
TTC13-204ENST00000471302 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
TTC13-204ENST00000471302 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
TTC13-204ENST00000471302 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
TTC13-204ENST00000471302 ZBTB22O15209 634 aa15.83■□□□□ 0.12
TTC13-204ENST00000471302 DSG3P32926 999 aa15.83■□□□□ 0.12
TTC13-204ENST00000471302 TRHP20396 242 aaPredicted RBP15.82■□□□□ 0.12
TTC13-204ENST00000471302 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
TTC13-204ENST00000471302 ABCB7O75027 752 aa15.68■□□□□ 0.1
TTC13-204ENST00000471302 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
TTC13-204ENST00000471302 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
TTC13-204ENST00000471302 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
TTC13-204ENST00000471302 POLA2Q14181 598 aa15.47■□□□□ 0.07
TTC13-204ENST00000471302 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
TTC13-204ENST00000471302 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
TTC13-204ENST00000471302 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
TTC13-204ENST00000471302 FBLN2P98095 1184 aa14.99□□□□□ -0.01
TTC13-204ENST00000471302 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
TTC13-204ENST00000471302 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
TTC13-204ENST00000471302 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
TTC13-204ENST00000471302 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
TTC13-204ENST00000471302 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
TTC13-204ENST00000471302 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
TTC13-204ENST00000471302 POTEHQ6S545 545 aa14.69□□□□□ -0.06
TTC13-204ENST00000471302 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
TTC13-204ENST00000471302 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
TTC13-204ENST00000471302 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
TTC13-204ENST00000471302 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
TTC13-204ENST00000471302 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
TTC13-204ENST00000471302 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
TTC13-204ENST00000471302 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
TTC13-204ENST00000471302 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
TTC13-204ENST00000471302 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
TTC13-204ENST00000471302 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
TTC13-204ENST00000471302 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
TTC13-204ENST00000471302 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
TTC13-204ENST00000471302 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
TTC13-204ENST00000471302 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
TTC13-204ENST00000471302 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
TTC13-204ENST00000471302 FKBP8Q14318 412 aa14.05□□□□□ -0.16
TTC13-204ENST00000471302 HAX1O00165 279 aa14.03□□□□□ -0.16
TTC13-204ENST00000471302 PROM2Q8N271 834 aa14.01□□□□□ -0.17
TTC13-204ENST00000471302 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
TTC13-204ENST00000471302 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
TTC13-204ENST00000471302 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
TTC13-204ENST00000471302 EVX2Q03828 476 aa13.87□□□□□ -0.19
TTC13-204ENST00000471302 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
TTC13-204ENST00000471302 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
TTC13-204ENST00000471302 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
TTC13-204ENST00000471302 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
TTC13-204ENST00000471302 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
TTC13-204ENST00000471302 MIER1Q8N108 512 aa13.68□□□□□ -0.22
TTC13-204ENST00000471302 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
TTC13-204ENST00000471302 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
TTC13-204ENST00000471302 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TTC13-204ENST00000471302 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
TTC13-204ENST00000471302 GABBR2O75899 941 aa13.57□□□□□ -0.24
TTC13-204ENST00000471302 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
TTC13-204ENST00000471302 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
TTC13-204ENST00000471302 CLCN6P51797 869 aa13.51□□□□□ -0.25
TTC13-204ENST00000471302 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
TTC13-204ENST00000471302 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
TTC13-204ENST00000471302 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
TTC13-204ENST00000471302 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
TTC13-204ENST00000471302 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
TTC13-204ENST00000471302 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms