RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
TMEM53-207ENST00000468117 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
TMEM53-207ENST00000468117 A0A1B0GVX0 72 aa11.71□□□□□ -0.53
TMEM53-207ENST00000468117 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
TMEM53-207ENST00000468117 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
TMEM53-207ENST00000468117 MMP24-AS1A0A0U1RRL7 71 aa11.67□□□□□ -0.54
TMEM53-207ENST00000468117 CASC2Q6XLA1 102 aa11.65□□□□□ -0.54
TMEM53-207ENST00000468117 BIRC6Q9NR09 4857 aa11.65□□□□□ -0.54
TMEM53-207ENST00000468117 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
TMEM53-207ENST00000468117 NOTCH2NLQ7Z3S9 236 aa11.65□□□□□ -0.54
TMEM53-207ENST00000468117 C8orf17Q9NRJ1 99 aa11.65□□□□□ -0.54
TMEM53-207ENST00000468117 SERP2Q8N6R1 65 aa11.62□□□□□ -0.55
TMEM53-207ENST00000468117 hDV103S1A0JD37 113 aa11.61□□□□□ -0.55
TMEM53-207ENST00000468117 DMBT1Q9UGM3 2413 aaPredicted RBP11.61□□□□□ -0.55
TMEM53-207ENST00000468117 SMIM20Q8N5G0 67 aa11.59□□□□□ -0.55
TMEM53-207ENST00000468117 OCR1Q9BZK8 76 aa11.59□□□□□ -0.55
TMEM53-207ENST00000468117 TRAV7A0A075B6U4 112 aa11.59□□□□□ -0.55
TMEM53-207ENST00000468117 COX7CP15954 63 aa11.58□□□□□ -0.56
TMEM53-207ENST00000468117 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
TMEM53-207ENST00000468117 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
TMEM53-207ENST00000468117 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
TMEM53-207ENST00000468117 UQCRQO14949 82 aa11.53□□□□□ -0.56
TMEM53-207ENST00000468117 C8orf87E5RJ46 101 aa11.53□□□□□ -0.56
TMEM53-207ENST00000468117 LINC00313P59037 77 aa11.53□□□□□ -0.56
TMEM53-207ENST00000468117 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.56
TMEM53-207ENST00000468117 HERC2O95714 4834 aa11.52□□□□□ -0.57
TMEM53-207ENST00000468117 MRPL34Q9BQ48 92 aaKnown RBP11.5□□□□□ -0.57
TMEM53-207ENST00000468117 TMEM254Q8TBM7 123 aa11.5□□□□□ -0.57
TMEM53-207ENST00000468117 OXTP01178 125 aa11.48□□□□□ -0.57
TMEM53-207ENST00000468117 NDUFS5O43920 106 aa11.45□□□□□ -0.58
TMEM53-207ENST00000468117 C20orf197Q8N268 126 aa11.43□□□□□ -0.58
TMEM53-207ENST00000468117 KRTAP16-1A8MUX0 517 aa11.42□□□□□ -0.58
TMEM53-207ENST00000468117 C9orf92A6NGG3 77 aa11.38□□□□□ -0.59
TMEM53-207ENST00000468117 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
TMEM53-207ENST00000468117 TP53AIP1Q9HCN2 124 aa11.37□□□□□ -0.59
TMEM53-207ENST00000468117 SNURFQ9Y675 71 aa11.37□□□□□ -0.59
TMEM53-207ENST00000468117 C5orf47Q569G3 176 aa11.36□□□□□ -0.59
TMEM53-207ENST00000468117 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
TMEM53-207ENST00000468117 KLKP1Q107X0 134 aa11.32□□□□□ -0.6
TMEM53-207ENST00000468117 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
TMEM53-207ENST00000468117 H0Y9P7 68 aa11.31□□□□□ -0.6
TMEM53-207ENST00000468117 A0A0U1RQV1 116 aa11.31□□□□□ -0.6
TMEM53-207ENST00000468117 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
TMEM53-207ENST00000468117 MP68P56378 58 aa11.3□□□□□ -0.6
TMEM53-207ENST00000468117 Q5W150 140 aa11.28□□□□□ -0.6
TMEM53-207ENST00000468117 LINC00208Q96KT6 92 aa11.26□□□□□ -0.61
TMEM53-207ENST00000468117 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
TMEM53-207ENST00000468117 J3QL48 77 aa11.25□□□□□ -0.61
TMEM53-207ENST00000468117 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
TMEM53-207ENST00000468117 PRR4Q16378 134 aa11.22□□□□□ -0.61
TMEM53-207ENST00000468117 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
TMEM53-207ENST00000468117 C1orf64Q8NEQ6 169 aa11.21□□□□□ -0.62
TMEM53-207ENST00000468117 H3BPC8 53 aa11.19□□□□□ -0.62
TMEM53-207ENST00000468117 H7BZZ5 65 aa11.19□□□□□ -0.62
TMEM53-207ENST00000468117 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
TMEM53-207ENST00000468117 A8MUU9 505 aa11.17□□□□□ -0.62
TMEM53-207ENST00000468117 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
TMEM53-207ENST00000468117 NDUFC1O43677 76 aa11.14□□□□□ -0.63
TMEM53-207ENST00000468117 Q75L30 129 aa11.09□□□□□ -0.63
TMEM53-207ENST00000468117 TMEM258P61165 79 aa11.08□□□□□ -0.64
TMEM53-207ENST00000468117 XP32Q5T750 250 aa11.08□□□□□ -0.64
TMEM53-207ENST00000468117 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
TMEM53-207ENST00000468117 LPAP08519 4548 aa11.05□□□□□ -0.64
TMEM53-207ENST00000468117 PCOTHQ58A44 107 aa11.04□□□□□ -0.64
TMEM53-207ENST00000468117 TPRXLQ17RH7 258 aa11.04□□□□□ -0.64
TMEM53-207ENST00000468117 CYP4F30PQ9H0H9 118 aa11.03□□□□□ -0.64
TMEM53-207ENST00000468117 IGKV2-30P06310 120 aa11.02□□□□□ -0.65
TMEM53-207ENST00000468117 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
TMEM53-207ENST00000468117 RPL37P61927 97 aaKnown RBP10.99□□□□□ -0.65
TMEM53-207ENST00000468117 FAM236DA0A1B0GTK5 79 aa10.99□□□□□ -0.65
TMEM53-207ENST00000468117 FAM236CP0DP71 79 aa10.99□□□□□ -0.65
TMEM53-207ENST00000468117 LRP2P98164 4655 aa10.97□□□□□ -0.65
TMEM53-207ENST00000468117 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
TMEM53-207ENST00000468117 HERC1Q15751 4861 aa10.92□□□□□ -0.66
TMEM53-207ENST00000468117 C7orf65Q6ZTY9 151 aa10.91□□□□□ -0.66
TMEM53-207ENST00000468117 SPANXA2-OT1Q8N9U9 137 aa10.89□□□□□ -0.67
TMEM53-207ENST00000468117 ATP5EP56381 51 aaPredicted RBP10.88□□□□□ -0.67
TMEM53-207ENST00000468117 HRES1P13985 223 aa10.87□□□□□ -0.67
TMEM53-207ENST00000468117 SPINK7P58062 85 aa10.84□□□□□ -0.67
TMEM53-207ENST00000468117 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
TMEM53-207ENST00000468117 SERP1Q9Y6X1 66 aa10.73□□□□□ -0.69
TMEM53-207ENST00000468117 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
TMEM53-207ENST00000468117 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
TMEM53-207ENST00000468117 DMAC1Q96GE9 116 aa10.67□□□□□ -0.7
TMEM53-207ENST00000468117 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
TMEM53-207ENST00000468117 COA5Q86WW8 74 aa10.61□□□□□ -0.71
TMEM53-207ENST00000468117 ACYP2P14621 99 aa10.6□□□□□ -0.71
TMEM53-207ENST00000468117 KRTAP3-1Q9BYR8 98 aa10.57□□□□□ -0.72
TMEM53-207ENST00000468117 COX6B2Q6YFQ2 88 aa10.55□□□□□ -0.72
TMEM53-207ENST00000468117 MUC17Q685J3 4493 aa10.53□□□□□ -0.72
TMEM53-207ENST00000468117 A8MUN3 132 aa10.53□□□□□ -0.72
TMEM53-207ENST00000468117 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
TMEM53-207ENST00000468117 CHKB-CPT1BH3BT56 60 aa10.45□□□□□ -0.74
TMEM53-207ENST00000468117 SMIM26A0A096LP01 95 aa10.45□□□□□ -0.74
TMEM53-207ENST00000468117 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
TMEM53-207ENST00000468117 MUC2Q02817 5179 aa10.42□□□□□ -0.74
TMEM53-207ENST00000468117 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
TMEM53-207ENST00000468117 UBR4Q5T4S7 5183 aa10.3□□□□□ -0.76
TMEM53-207ENST00000468117 H1FX-AS1Q4G0G2 97 aa10.29□□□□□ -0.76
TMEM53-207ENST00000468117 Q1T7F1 81 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms