RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 MYCBP2O75592 4640 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 TNXBP22105 4242 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 ATOX1O00244 68 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 KRTAP4-5Q9BYR2 181 aa10.81□□□□□ -0.68
CCDC78-206ENST00000463539 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
CCDC78-206ENST00000463539 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
CCDC78-206ENST00000463539 MMP24-AS1A0A0U1RRL7 71 aa10.75□□□□□ -0.69
CCDC78-206ENST00000463539 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
CCDC78-206ENST00000463539 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
CCDC78-206ENST00000463539 OXTP01178 125 aa10.74□□□□□ -0.69
CCDC78-206ENST00000463539 MT1HL1P0DM35 61 aa10.74□□□□□ -0.69
CCDC78-206ENST00000463539 HERC2O95714 4834 aa10.74□□□□□ -0.69
CCDC78-206ENST00000463539 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
CCDC78-206ENST00000463539 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
CCDC78-206ENST00000463539 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
CCDC78-206ENST00000463539 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
CCDC78-206ENST00000463539 SMIM20Q8N5G0 67 aa10.69□□□□□ -0.7
CCDC78-206ENST00000463539 RETNLBQ9BQ08 111 aa10.68□□□□□ -0.7
CCDC78-206ENST00000463539 ABCA13Q86UQ4 5058 aa10.67□□□□□ -0.7
CCDC78-206ENST00000463539 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
CCDC78-206ENST00000463539 LINC00313P59037 77 aa10.65□□□□□ -0.71
CCDC78-206ENST00000463539 TRAV7A0A075B6U4 112 aa10.64□□□□□ -0.71
CCDC78-206ENST00000463539 OCR1Q9BZK8 76 aa10.64□□□□□ -0.71
CCDC78-206ENST00000463539 TMEM254Q8TBM7 123 aa10.63□□□□□ -0.71
CCDC78-206ENST00000463539 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-206ENST00000463539 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
CCDC78-206ENST00000463539 COX7CP15954 63 aa10.61□□□□□ -0.71
CCDC78-206ENST00000463539 UQCRQO14949 82 aa10.56□□□□□ -0.72
CCDC78-206ENST00000463539 NDUFS5O43920 106 aa10.56□□□□□ -0.72
CCDC78-206ENST00000463539 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
CCDC78-206ENST00000463539 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
CCDC78-206ENST00000463539 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
CCDC78-206ENST00000463539 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
CCDC78-206ENST00000463539 J3QL48 77 aa10.5□□□□□ -0.73
CCDC78-206ENST00000463539 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
CCDC78-206ENST00000463539 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
CCDC78-206ENST00000463539 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
CCDC78-206ENST00000463539 C5orf47Q569G3 176 aa10.47□□□□□ -0.73
CCDC78-206ENST00000463539 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
CCDC78-206ENST00000463539 TRAV22A0A0B4J277 110 aa10.43□□□□□ -0.74
CCDC78-206ENST00000463539 MP68P56378 58 aa10.42□□□□□ -0.74
CCDC78-206ENST00000463539 PCLOQ9Y6V0 5065 aa10.42□□□□□ -0.74
CCDC78-206ENST00000463539 H0Y9P7 68 aa10.42□□□□□ -0.74
CCDC78-206ENST00000463539 PRR4Q16378 134 aa10.42□□□□□ -0.74
CCDC78-206ENST00000463539 SNURFQ9Y675 71 aa10.4□□□□□ -0.75
CCDC78-206ENST00000463539 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
CCDC78-206ENST00000463539 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
CCDC78-206ENST00000463539 C20orf166-AS1Q96NR2 134 aa10.36□□□□□ -0.75
CCDC78-206ENST00000463539 KRTAP13-3Q3SY46 172 aa10.35□□□□□ -0.75
CCDC78-206ENST00000463539 Q5W150 140 aa10.35□□□□□ -0.75
CCDC78-206ENST00000463539 LINC00208Q96KT6 92 aa10.35□□□□□ -0.75
CCDC78-206ENST00000463539 A8MUU9 505 aa10.34□□□□□ -0.75
CCDC78-206ENST00000463539 CYSTM1Q9H1C7 97 aa10.34□□□□□ -0.75
CCDC78-206ENST00000463539 H3BPC8 53 aa10.33□□□□□ -0.76
CCDC78-206ENST00000463539 C1orf64Q8NEQ6 169 aa10.31□□□□□ -0.76
CCDC78-206ENST00000463539 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
CCDC78-206ENST00000463539 Q75L30 129 aa10.28□□□□□ -0.76
CCDC78-206ENST00000463539 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
CCDC78-206ENST00000463539 NDUFC1O43677 76 aa10.26□□□□□ -0.77
CCDC78-206ENST00000463539 XP32Q5T750 250 aa10.26□□□□□ -0.77
CCDC78-206ENST00000463539 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
CCDC78-206ENST00000463539 H7BZZ5 65 aa10.23□□□□□ -0.77
CCDC78-206ENST00000463539 RPL37P61927 97 aaKnown RBP10.2□□□□□ -0.78
CCDC78-206ENST00000463539 RPS28P62857 69 aaKnown RBP10.17□□□□□ -0.78
CCDC78-206ENST00000463539 IGKV2-30P06310 120 aa10.17□□□□□ -0.78
CCDC78-206ENST00000463539 TMEM258P61165 79 aa10.17□□□□□ -0.78
CCDC78-206ENST00000463539 ATP11AUNQ6ZP68 121 aa10.17□□□□□ -0.78
CCDC78-206ENST00000463539 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
CCDC78-206ENST00000463539 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
CCDC78-206ENST00000463539 PCOTHQ58A44 107 aa10.14□□□□□ -0.79
CCDC78-206ENST00000463539 LPAP08519 4548 aa10.1□□□□□ -0.79
CCDC78-206ENST00000463539 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
CCDC78-206ENST00000463539 HERC1Q15751 4861 aa10.08□□□□□ -0.8
CCDC78-206ENST00000463539 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
CCDC78-206ENST00000463539 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
CCDC78-206ENST00000463539 SPANXA2-OT1Q8N9U9 137 aa10.03□□□□□ -0.8
CCDC78-206ENST00000463539 LRP2P98164 4655 aa10.03□□□□□ -0.8
CCDC78-206ENST00000463539 ATP5EP56381 51 aaPredicted RBP10.03□□□□□ -0.8
CCDC78-206ENST00000463539 SPINK7P58062 85 aa10.02□□□□□ -0.81
CCDC78-206ENST00000463539 HRES1P13985 223 aa10□□□□□ -0.81
CCDC78-206ENST00000463539 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.81
CCDC78-206ENST00000463539 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
CCDC78-206ENST00000463539 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
CCDC78-206ENST00000463539 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
CCDC78-206ENST00000463539 SERP1Q9Y6X1 66 aa9.84□□□□□ -0.83
CCDC78-206ENST00000463539 ACYP2P14621 99 aa9.77□□□□□ -0.84
CCDC78-206ENST00000463539 MUC17Q685J3 4493 aa9.77□□□□□ -0.85
CCDC78-206ENST00000463539 A8MUN3 132 aa9.76□□□□□ -0.85
CCDC78-206ENST00000463539 COX6B2Q6YFQ2 88 aa9.75□□□□□ -0.85
CCDC78-206ENST00000463539 COA5Q86WW8 74 aa9.74□□□□□ -0.85
CCDC78-206ENST00000463539 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.85
CCDC78-206ENST00000463539 PRO0628Q9UI54 55 aa9.69□□□□□ -0.86
CCDC78-206ENST00000463539 KRTAP4-1Q9BYQ7 146 aa9.68□□□□□ -0.86
CCDC78-206ENST00000463539 MPLKIPQ8TAP9 179 aa9.67□□□□□ -0.86
CCDC78-206ENST00000463539 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
CCDC78-206ENST00000463539 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
CCDC78-206ENST00000463539 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
CCDC78-206ENST00000463539 UBR4Q5T4S7 5183 aa9.57□□□□□ -0.88
CCDC78-206ENST00000463539 MUC2Q02817 5179 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms