RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
CHRD-208ENST00000460627 Q1T7F1 81 aa10.28□□□□□ -0.76
CHRD-208ENST00000460627 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
CHRD-208ENST00000460627 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
CHRD-208ENST00000460627 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
CHRD-208ENST00000460627 OXTP01178 125 aa10.24□□□□□ -0.77
CHRD-208ENST00000460627 A0A0D9SG42 100 aa10.2□□□□□ -0.78
CHRD-208ENST00000460627 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
CHRD-208ENST00000460627 A0A1B0GU33 70 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 M0R2T5 61 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 S4R3F8 94 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 CYSTM1Q9H1C7 97 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
CHRD-208ENST00000460627 Q5XG85 94 aa10.18□□□□□ -0.78
CHRD-208ENST00000460627 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
CHRD-208ENST00000460627 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
CHRD-208ENST00000460627 PDZD2O15018 2839 aa10.12□□□□□ -0.79
CHRD-208ENST00000460627 Q75L30 129 aa10.11□□□□□ -0.79
CHRD-208ENST00000460627 DMAC1Q96GE9 116 aa10.11□□□□□ -0.79
CHRD-208ENST00000460627 NOTCH2NLQ7Z3S9 236 aa10.09□□□□□ -0.79
CHRD-208ENST00000460627 TENM3Q9P273 2699 aa10.08□□□□□ -0.8
CHRD-208ENST00000460627 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
CHRD-208ENST00000460627 CELSR1Q9NYQ6 3014 aa10.06□□□□□ -0.8
CHRD-208ENST00000460627 SMG1Q96Q15 3661 aaKnown RBP10.03□□□□□ -0.8
CHRD-208ENST00000460627 CAMK2N1Q7Z7J9 78 aa10.01□□□□□ -0.81
CHRD-208ENST00000460627 TENM2Q9NT68 2774 aa9.96□□□□□ -0.81
CHRD-208ENST00000460627 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
CHRD-208ENST00000460627 R4GN34 69 aa9.95□□□□□ -0.82
CHRD-208ENST00000460627 OTOGQ6ZRI0 2925 aa9.93□□□□□ -0.82
CHRD-208ENST00000460627 Q5VV11 94 aa9.9□□□□□ -0.82
CHRD-208ENST00000460627 LCA10Q71F78 164 aa9.86□□□□□ -0.83
CHRD-208ENST00000460627 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
CHRD-208ENST00000460627 PKD1L1Q8TDX9 2849 aa9.85□□□□□ -0.83
CHRD-208ENST00000460627 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
CHRD-208ENST00000460627 CSMD1Q96PZ7 3565 aa9.84□□□□□ -0.83
CHRD-208ENST00000460627 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
CHRD-208ENST00000460627 A8MUU9 505 aa9.77□□□□□ -0.85
CHRD-208ENST00000460627 SVEP1Q4LDE5 3571 aa9.77□□□□□ -0.85
CHRD-208ENST00000460627 M0QZ58 72 aa9.74□□□□□ -0.85
CHRD-208ENST00000460627 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
CHRD-208ENST00000460627 FBN1P35555 2871 aaKnown RBP9.74□□□□□ -0.85
CHRD-208ENST00000460627 TGP01266 2768 aa9.73□□□□□ -0.85
CHRD-208ENST00000460627 VWFP04275 2813 aa9.71□□□□□ -0.86
CHRD-208ENST00000460627 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
CHRD-208ENST00000460627 SPENQ96T58 3664 aaKnown RBP9.7□□□□□ -0.86
CHRD-208ENST00000460627 BSNQ9UPA5 3926 aa9.66□□□□□ -0.86
CHRD-208ENST00000460627 A0A1B0GVY2 172 aa9.57□□□□□ -0.88
CHRD-208ENST00000460627 NBPF19A0A087WUL8 3843 aa9.57□□□□□ -0.88
CHRD-208ENST00000460627 SPATA8Q6RVD6 105 aa9.55□□□□□ -0.88
CHRD-208ENST00000460627 XP32Q5T750 250 aa9.54□□□□□ -0.88
CHRD-208ENST00000460627 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
CHRD-208ENST00000460627 ROMO1P60602 79 aa9.51□□□□□ -0.89
CHRD-208ENST00000460627 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
CHRD-208ENST00000460627 ZFHX3Q15911 3703 aa9.49□□□□□ -0.89
CHRD-208ENST00000460627 LUZP6Q538Z0 58 aa9.47□□□□□ -0.89
CHRD-208ENST00000460627 CSMD2Q7Z408 3487 aa9.46□□□□□ -0.9
CHRD-208ENST00000460627 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
CHRD-208ENST00000460627 CUBNO60494 3623 aa9.44□□□□□ -0.9
CHRD-208ENST00000460627 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
CHRD-208ENST00000460627 KRTAP10-8P60410 259 aa9.4□□□□□ -0.91
CHRD-208ENST00000460627 ANK3Q12955 4377 aaKnown RBP9.36□□□□□ -0.91
CHRD-208ENST00000460627 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
CHRD-208ENST00000460627 A8MU10 97 aa9.3□□□□□ -0.92
CHRD-208ENST00000460627 SRRM2Q9UQ35 2752 aaKnown RBP9.19□□□□□ -0.94
CHRD-208ENST00000460627 VPS13CQ709C8 3753 aa9.17□□□□□ -0.94
CHRD-208ENST00000460627 FBN3Q75N90 2809 aa9.16□□□□□ -0.94
CHRD-208ENST00000460627 A6NN06 94 aa9.12□□□□□ -0.95
CHRD-208ENST00000460627 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
CHRD-208ENST00000460627 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
CHRD-208ENST00000460627 TNP1P09430 55 aa9□□□□□ -0.97
CHRD-208ENST00000460627 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
CHRD-208ENST00000460627 H3BS24 57 aa8.97□□□□□ -0.97
CHRD-208ENST00000460627 ZNF469Q96JG9 3925 aaPredicted RBP8.9□□□□□ -0.98
CHRD-208ENST00000460627 KRTAP10-10P60014 251 aa8.9□□□□□ -0.99
CHRD-208ENST00000460627 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
CHRD-208ENST00000460627 H0YAA0 97 aa8.87□□□□□ -0.99
CHRD-208ENST00000460627 P0C880 135 aa8.85□□□□□ -0.99
CHRD-208ENST00000460627 A0A0A0MQY5 61 aa8.78□□□□□ -1
CHRD-208ENST00000460627 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
CHRD-208ENST00000460627 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
CHRD-208ENST00000460627 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CHRD-208ENST00000460627 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
CHRD-208ENST00000460627 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
CHRD-208ENST00000460627 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
CHRD-208ENST00000460627 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
CHRD-208ENST00000460627 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
CHRD-208ENST00000460627 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
CHRD-208ENST00000460627 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
CHRD-208ENST00000460627 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
CHRD-208ENST00000460627 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
CHRD-208ENST00000460627 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
CHRD-208ENST00000460627 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
CHRD-208ENST00000460627 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
CHRD-208ENST00000460627 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
CHRD-208ENST00000460627 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
CHRD-208ENST00000460627 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
CHRD-208ENST00000460627 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
CHRD-208ENST00000460627 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
CHRD-208ENST00000460627 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms