RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 ATMQ13315 3056 aa6.17□□□□□ -1.42
TRAPPC10-204ENST00000459741 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
TRAPPC10-204ENST00000459741 UTP20O75691 2785 aaKnown RBP6.15□□□□□ -1.42
TRAPPC10-204ENST00000459741 CELSR3Q9NYQ7 3312 aa6.15□□□□□ -1.43
TRAPPC10-204ENST00000459741 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
TRAPPC10-204ENST00000459741 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
TRAPPC10-204ENST00000459741 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
TRAPPC10-204ENST00000459741 ASH1LQ9NR48 2969 aaKnown RBP6.11□□□□□ -1.43
TRAPPC10-204ENST00000459741 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
TRAPPC10-204ENST00000459741 VCANP13611 3396 aa6.1□□□□□ -1.43
TRAPPC10-204ENST00000459741 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
TRAPPC10-204ENST00000459741 KRTAP13-3Q3SY46 172 aa6.09□□□□□ -1.43
TRAPPC10-204ENST00000459741 TACC2O95359 2948 aa6.09□□□□□ -1.43
TRAPPC10-204ENST00000459741 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
TRAPPC10-204ENST00000459741 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
TRAPPC10-204ENST00000459741 DNAH14Q0VDD8 3507 aa6.07□□□□□ -1.44
TRAPPC10-204ENST00000459741 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
TRAPPC10-204ENST00000459741 HIVEP1P15822 2718 aa6.06□□□□□ -1.44
TRAPPC10-204ENST00000459741 BOD1L1Q8NFC6 3051 aa6.05□□□□□ -1.44
TRAPPC10-204ENST00000459741 A0A1B0GVY2 172 aa6.05□□□□□ -1.44
TRAPPC10-204ENST00000459741 FRYLO94915 3013 aa6.05□□□□□ -1.44
TRAPPC10-204ENST00000459741 DMXL2Q8TDJ6 3036 aa6.04□□□□□ -1.44
TRAPPC10-204ENST00000459741 HRNRQ86YZ3 2850 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC10-204ENST00000459741 P0C880 135 aa6.02□□□□□ -1.45
TRAPPC10-204ENST00000459741 SZT2Q5T011 3432 aa6□□□□□ -1.45
TRAPPC10-204ENST00000459741 ZANQ9Y493 2812 aa5.99□□□□□ -1.45
TRAPPC10-204ENST00000459741 CELSR2Q9HCU4 2923 aa5.98□□□□□ -1.45
TRAPPC10-204ENST00000459741 COL6A3P12111 3177 aa5.97□□□□□ -1.45
TRAPPC10-204ENST00000459741 XP32Q5T750 250 aa5.96□□□□□ -1.46
TRAPPC10-204ENST00000459741 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
TRAPPC10-204ENST00000459741 TNRC18O15417 2968 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC10-204ENST00000459741 DCHS2Q6V1P9 2916 aa5.91□□□□□ -1.46
TRAPPC10-204ENST00000459741 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
TRAPPC10-204ENST00000459741 EYSQ5T1H1 3165 aa5.86□□□□□ -1.47
TRAPPC10-204ENST00000459741 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
TRAPPC10-204ENST00000459741 FBN2P35556 2912 aa5.84□□□□□ -1.47
TRAPPC10-204ENST00000459741 CFAP47Q6ZTR5 3102 aa5.81□□□□□ -1.48
TRAPPC10-204ENST00000459741 NF1P21359 2839 aa5.8□□□□□ -1.48
TRAPPC10-204ENST00000459741 REV3LO60673 3130 aa5.79□□□□□ -1.48
TRAPPC10-204ENST00000459741 TGP01266 2768 aa5.78□□□□□ -1.48
TRAPPC10-204ENST00000459741 TENM4Q6N022 2769 aa5.75□□□□□ -1.49
TRAPPC10-204ENST00000459741 MXRA5Q9NR99 2828 aa5.74□□□□□ -1.49
TRAPPC10-204ENST00000459741 SPTBN5Q9NRC6 3674 aaKnown RBP5.73□□□□□ -1.49
TRAPPC10-204ENST00000459741 TENM3Q9P273 2699 aa5.71□□□□□ -1.49
TRAPPC10-204ENST00000459741 DMXL1Q9Y485 3027 aa5.71□□□□□ -1.49
TRAPPC10-204ENST00000459741 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
TRAPPC10-204ENST00000459741 USP34Q70CQ2 3546 aa5.71□□□□□ -1.5
TRAPPC10-204ENST00000459741 SPEGQ15772 3267 aa5.69□□□□□ -1.5
TRAPPC10-204ENST00000459741 LOC400499M0QZD8 3231 aa5.68□□□□□ -1.5
TRAPPC10-204ENST00000459741 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
TRAPPC10-204ENST00000459741 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
TRAPPC10-204ENST00000459741 CELSR1Q9NYQ6 3014 aa5.63□□□□□ -1.51
TRAPPC10-204ENST00000459741 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
TRAPPC10-204ENST00000459741 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
TRAPPC10-204ENST00000459741 TENM1Q9UKZ4 2725 aa5.56□□□□□ -1.52
TRAPPC10-204ENST00000459741 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC10-204ENST00000459741 PDZD2O15018 2839 aa5.52□□□□□ -1.53
TRAPPC10-204ENST00000459741 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
TRAPPC10-204ENST00000459741 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
TRAPPC10-204ENST00000459741 MYO15AQ9UKN7 3530 aa5.4□□□□□ -1.54
TRAPPC10-204ENST00000459741 WDFY3Q8IZQ1 3526 aa5.38□□□□□ -1.55
TRAPPC10-204ENST00000459741 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
TRAPPC10-204ENST00000459741 RELNP78509 3460 aa5.36□□□□□ -1.55
TRAPPC10-204ENST00000459741 PKD1L1Q8TDX9 2849 aa5.36□□□□□ -1.55
TRAPPC10-204ENST00000459741 DCHS1Q96JQ0 3298 aa5.35□□□□□ -1.55
TRAPPC10-204ENST00000459741 VWFP04275 2813 aa5.35□□□□□ -1.55
TRAPPC10-204ENST00000459741 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
TRAPPC10-204ENST00000459741 CSMD1Q96PZ7 3565 aa5.28□□□□□ -1.56
TRAPPC10-204ENST00000459741 ZFHX4Q86UP3 3567 aa5.27□□□□□ -1.57
TRAPPC10-204ENST00000459741 INE1O15225 51 aa5.26□□□□□ -1.57
TRAPPC10-204ENST00000459741 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
TRAPPC10-204ENST00000459741 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
TRAPPC10-204ENST00000459741 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.58
TRAPPC10-204ENST00000459741 SMG1Q96Q15 3661 aaKnown RBP5.21□□□□□ -1.58
TRAPPC10-204ENST00000459741 FBN1P35555 2871 aaKnown RBP5.2□□□□□ -1.58
TRAPPC10-204ENST00000459741 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
TRAPPC10-204ENST00000459741 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
TRAPPC10-204ENST00000459741 ASPMQ8IZT6 3477 aa5.17□□□□□ -1.58
TRAPPC10-204ENST00000459741 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
TRAPPC10-204ENST00000459741 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
TRAPPC10-204ENST00000459741 LAMA5O15230 3695 aa5.13□□□□□ -1.59
TRAPPC10-204ENST00000459741 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
TRAPPC10-204ENST00000459741 KRTAP10-4P60372 401 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC10-204ENST00000459741 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
TRAPPC10-204ENST00000459741 NBPF19A0A087WUL8 3843 aa5.02□□□□□ -1.61
TRAPPC10-204ENST00000459741 SVEP1Q4LDE5 3571 aa5.02□□□□□ -1.61
TRAPPC10-204ENST00000459741 HUWE1Q7Z6Z7 4374 aaKnown RBP4.98□□□□□ -1.61
TRAPPC10-204ENST00000459741 DMDP11532 3685 aa4.98□□□□□ -1.61
TRAPPC10-204ENST00000459741 TRRAPQ9Y4A5 3859 aa4.97□□□□□ -1.61
TRAPPC10-204ENST00000459741 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
TRAPPC10-204ENST00000459741 ZFHX3Q15911 3703 aa4.92□□□□□ -1.62
TRAPPC10-204ENST00000459741 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.63
TRAPPC10-204ENST00000459741 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
TRAPPC10-204ENST00000459741 BSNQ9UPA5 3926 aa4.87□□□□□ -1.63
TRAPPC10-204ENST00000459741 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC10-204ENST00000459741 CUBNO60494 3623 aa4.85□□□□□ -1.63
TRAPPC10-204ENST00000459741 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TRAPPC10-204ENST00000459741 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
TRAPPC10-204ENST00000459741 MUC3AQ02505 3323 aa4.84□□□□□ -1.63
TRAPPC10-204ENST00000459741 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms