RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 FLNCQ14315 2725 aa7.95□□□□□ -1.14
HIPK3-203ENST00000456517 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
HIPK3-203ENST00000456517 TENM4Q6N022 2769 aa7.94□□□□□ -1.14
HIPK3-203ENST00000456517 HIVEP1P15822 2718 aa7.93□□□□□ -1.14
HIPK3-203ENST00000456517 A0A1B0GVY2 172 aa7.9□□□□□ -1.14
HIPK3-203ENST00000456517 A6NN06 94 aa7.88□□□□□ -1.15
HIPK3-203ENST00000456517 UNC80Q8N2C7 3258 aa7.87□□□□□ -1.15
HIPK3-203ENST00000456517 LAMA1P25391 3075 aa7.85□□□□□ -1.15
HIPK3-203ENST00000456517 FRYLO94915 3013 aa7.84□□□□□ -1.15
HIPK3-203ENST00000456517 LRBAP50851 2863 aa7.82□□□□□ -1.16
HIPK3-203ENST00000456517 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
HIPK3-203ENST00000456517 XP32Q5T750 250 aa7.81□□□□□ -1.16
HIPK3-203ENST00000456517 CELSR2Q9HCU4 2923 aa7.78□□□□□ -1.16
HIPK3-203ENST00000456517 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
HIPK3-203ENST00000456517 ATMQ13315 3056 aa7.77□□□□□ -1.17
HIPK3-203ENST00000456517 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
HIPK3-203ENST00000456517 P0C880 135 aa7.73□□□□□ -1.17
HIPK3-203ENST00000456517 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
HIPK3-203ENST00000456517 TENM1Q9UKZ4 2725 aa7.72□□□□□ -1.17
HIPK3-203ENST00000456517 CDH23Q9H251 3354 aa7.7□□□□□ -1.18
HIPK3-203ENST00000456517 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
HIPK3-203ENST00000456517 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
HIPK3-203ENST00000456517 CFAP47Q6ZTR5 3102 aa7.69□□□□□ -1.18
HIPK3-203ENST00000456517 VCANP13611 3396 aa7.69□□□□□ -1.18
HIPK3-203ENST00000456517 NIPBLQ6KC79 2804 aaeCLIP7.68□□□□□ -1.18
HIPK3-203ENST00000456517 KRTAP1-4P0C5Y4 121 aa7.68□□□□□ -1.18
HIPK3-203ENST00000456517 TENM3Q9P273 2699 aa7.66□□□□□ -1.18
HIPK3-203ENST00000456517 DCHS2Q6V1P9 2916 aa7.64□□□□□ -1.19
HIPK3-203ENST00000456517 ADGRG4Q8IZF6 3080 aa7.63□□□□□ -1.19
HIPK3-203ENST00000456517 ZZEF1O43149 2961 aa7.62□□□□□ -1.19
HIPK3-203ENST00000456517 COL6A3P12111 3177 aa7.62□□□□□ -1.19
HIPK3-203ENST00000456517 NF1P21359 2839 aa7.6□□□□□ -1.19
HIPK3-203ENST00000456517 NBEAQ8NFP9 2946 aa7.53□□□□□ -1.2
HIPK3-203ENST00000456517 SPEGQ15772 3267 aa7.51□□□□□ -1.21
HIPK3-203ENST00000456517 H0YAA0 97 aa7.5□□□□□ -1.21
HIPK3-203ENST00000456517 DNAH14Q0VDD8 3507 aa7.5□□□□□ -1.21
HIPK3-203ENST00000456517 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
HIPK3-203ENST00000456517 SZT2Q5T011 3432 aa7.45□□□□□ -1.22
HIPK3-203ENST00000456517 TNRC18O15417 2968 aaPredicted RBP7.43□□□□□ -1.22
HIPK3-203ENST00000456517 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
HIPK3-203ENST00000456517 EYSQ5T1H1 3165 aa7.4□□□□□ -1.23
HIPK3-203ENST00000456517 USP34Q70CQ2 3546 aa7.39□□□□□ -1.23
HIPK3-203ENST00000456517 ZANQ9Y493 2812 aa7.38□□□□□ -1.23
HIPK3-203ENST00000456517 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
HIPK3-203ENST00000456517 TGP01266 2768 aa7.34□□□□□ -1.23
HIPK3-203ENST00000456517 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.23
HIPK3-203ENST00000456517 PDZD2O15018 2839 aa7.34□□□□□ -1.23
HIPK3-203ENST00000456517 FBN2P35556 2912 aa7.29□□□□□ -1.24
HIPK3-203ENST00000456517 VWFP04275 2813 aa7.27□□□□□ -1.25
HIPK3-203ENST00000456517 DMXL1Q9Y485 3027 aa7.16□□□□□ -1.26
HIPK3-203ENST00000456517 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
HIPK3-203ENST00000456517 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
HIPK3-203ENST00000456517 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
HIPK3-203ENST00000456517 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
HIPK3-203ENST00000456517 MYO15AQ9UKN7 3530 aa7.04□□□□□ -1.28
HIPK3-203ENST00000456517 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
HIPK3-203ENST00000456517 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
HIPK3-203ENST00000456517 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
HIPK3-203ENST00000456517 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
HIPK3-203ENST00000456517 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
HIPK3-203ENST00000456517 ZFHX4Q86UP3 3567 aa6.91□□□□□ -1.3
HIPK3-203ENST00000456517 WDFY3Q8IZQ1 3526 aa6.9□□□□□ -1.3
HIPK3-203ENST00000456517 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
HIPK3-203ENST00000456517 DCHS1Q96JQ0 3298 aa6.88□□□□□ -1.31
HIPK3-203ENST00000456517 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
HIPK3-203ENST00000456517 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
HIPK3-203ENST00000456517 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
HIPK3-203ENST00000456517 RELNP78509 3460 aa6.75□□□□□ -1.33
HIPK3-203ENST00000456517 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
HIPK3-203ENST00000456517 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
HIPK3-203ENST00000456517 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
HIPK3-203ENST00000456517 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
HIPK3-203ENST00000456517 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
HIPK3-203ENST00000456517 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
HIPK3-203ENST00000456517 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
HIPK3-203ENST00000456517 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
HIPK3-203ENST00000456517 INE1O15225 51 aa6.47□□□□□ -1.37
HIPK3-203ENST00000456517 LAMA5O15230 3695 aa6.46□□□□□ -1.38
HIPK3-203ENST00000456517 CSMD1Q96PZ7 3565 aa6.43□□□□□ -1.38
HIPK3-203ENST00000456517 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
HIPK3-203ENST00000456517 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
HIPK3-203ENST00000456517 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
HIPK3-203ENST00000456517 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
HIPK3-203ENST00000456517 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
HIPK3-203ENST00000456517 TRRAPQ9Y4A5 3859 aa6.27□□□□□ -1.41
HIPK3-203ENST00000456517 DMDP11532 3685 aa6.25□□□□□ -1.41
HIPK3-203ENST00000456517 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
HIPK3-203ENST00000456517 CSMD2Q7Z408 3487 aa6.22□□□□□ -1.41
HIPK3-203ENST00000456517 SMG1Q96Q15 3661 aaKnown RBP6.22□□□□□ -1.41
HIPK3-203ENST00000456517 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
HIPK3-203ENST00000456517 CUBNO60494 3623 aa6.21□□□□□ -1.41
HIPK3-203ENST00000456517 ANK3Q12955 4377 aaKnown RBP6.2□□□□□ -1.42
HIPK3-203ENST00000456517 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
HIPK3-203ENST00000456517 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
HIPK3-203ENST00000456517 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
HIPK3-203ENST00000456517 KRTAP10-5P60370 271 aa6.15□□□□□ -1.43
HIPK3-203ENST00000456517 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
HIPK3-203ENST00000456517 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
HIPK3-203ENST00000456517 SVEP1Q4LDE5 3571 aa6.11□□□□□ -1.43
HIPK3-203ENST00000456517 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms