RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 SPINK1P00995 79 aa4.32□□□□□ -1.72
ERCC3-204ENST00000456257 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
ERCC3-204ENST00000456257 APOBP04114 4563 aaKnown RBP4.32□□□□□ -1.72
ERCC3-204ENST00000456257 HERC2O95714 4834 aa4.32□□□□□ -1.72
ERCC3-204ENST00000456257 TYMSOSQ8TAI1 123 aa4.31□□□□□ -1.72
ERCC3-204ENST00000456257 K7EQZ3 153 aa4.3□□□□□ -1.72
ERCC3-204ENST00000456257 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
ERCC3-204ENST00000456257 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
ERCC3-204ENST00000456257 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
ERCC3-204ENST00000456257 Q8N9L7 120 aa4.3□□□□□ -1.72
ERCC3-204ENST00000456257 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
ERCC3-204ENST00000456257 Q8N1X5 172 aa4.29□□□□□ -1.72
ERCC3-204ENST00000456257 SERP2Q8N6R1 65 aa4.29□□□□□ -1.72
ERCC3-204ENST00000456257 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
ERCC3-204ENST00000456257 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
ERCC3-204ENST00000456257 HRCT1Q6UXD1 115 aa4.28□□□□□ -1.72
ERCC3-204ENST00000456257 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
ERCC3-204ENST00000456257 NDUFB1O75438 58 aa4.27□□□□□ -1.73
ERCC3-204ENST00000456257 Q5VSD8 79 aa4.27□□□□□ -1.73
ERCC3-204ENST00000456257 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
ERCC3-204ENST00000456257 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 UQCRQO14949 82 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 COX7CP15954 63 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 FAT1Q14517 4588 aa4.26□□□□□ -1.73
ERCC3-204ENST00000456257 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
ERCC3-204ENST00000456257 HSPG2P98160 4391 aa4.24□□□□□ -1.73
ERCC3-204ENST00000456257 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
ERCC3-204ENST00000456257 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
ERCC3-204ENST00000456257 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
ERCC3-204ENST00000456257 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
ERCC3-204ENST00000456257 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
ERCC3-204ENST00000456257 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
ERCC3-204ENST00000456257 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
ERCC3-204ENST00000456257 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.73
ERCC3-204ENST00000456257 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
ERCC3-204ENST00000456257 TMEM254Q8TBM7 123 aa4.21□□□□□ -1.74
ERCC3-204ENST00000456257 OXTP01178 125 aa4.2□□□□□ -1.74
ERCC3-204ENST00000456257 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
ERCC3-204ENST00000456257 C5orf47Q569G3 176 aa4.2□□□□□ -1.74
ERCC3-204ENST00000456257 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
ERCC3-204ENST00000456257 KRTAP16-1A8MUX0 517 aa4.19□□□□□ -1.74
ERCC3-204ENST00000456257 LINC00313P59037 77 aa4.19□□□□□ -1.74
ERCC3-204ENST00000456257 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
ERCC3-204ENST00000456257 IGHV6-1A0A0B4J1U7 121 aa4.18□□□□□ -1.74
ERCC3-204ENST00000456257 WFDC13Q8IUB5 93 aa4.18□□□□□ -1.74
ERCC3-204ENST00000456257 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
ERCC3-204ENST00000456257 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
ERCC3-204ENST00000456257 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 H3BPC8 53 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 KIAA1109Q2LD37 5005 aa4.17□□□□□ -1.74
ERCC3-204ENST00000456257 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
ERCC3-204ENST00000456257 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.75
ERCC3-204ENST00000456257 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.75
ERCC3-204ENST00000456257 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
ERCC3-204ENST00000456257 H7BZZ5 65 aa4.13□□□□□ -1.75
ERCC3-204ENST00000456257 NDUFC1O43677 76 aa4.13□□□□□ -1.75
ERCC3-204ENST00000456257 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
ERCC3-204ENST00000456257 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
ERCC3-204ENST00000456257 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
ERCC3-204ENST00000456257 A8MUU9 505 aa4.11□□□□□ -1.75
ERCC3-204ENST00000456257 Q5W150 140 aa4.11□□□□□ -1.75
ERCC3-204ENST00000456257 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
ERCC3-204ENST00000456257 TNXBP22105 4242 aa4.1□□□□□ -1.75
ERCC3-204ENST00000456257 LRP1Q07954 4544 aaKnown RBP4.1□□□□□ -1.75
ERCC3-204ENST00000456257 H0Y9P7 68 aa4.09□□□□□ -1.75
ERCC3-204ENST00000456257 MP68P56378 58 aa4.09□□□□□ -1.75
ERCC3-204ENST00000456257 TMEM258P61165 79 aa4.08□□□□□ -1.76
ERCC3-204ENST00000456257 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
ERCC3-204ENST00000456257 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
ERCC3-204ENST00000456257 Q75L30 129 aa4.07□□□□□ -1.76
ERCC3-204ENST00000456257 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
ERCC3-204ENST00000456257 LINC00208Q96KT6 92 aa4.07□□□□□ -1.76
ERCC3-204ENST00000456257 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
ERCC3-204ENST00000456257 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
ERCC3-204ENST00000456257 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
ERCC3-204ENST00000456257 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
ERCC3-204ENST00000456257 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
ERCC3-204ENST00000456257 NDUFS5O43920 106 aa4.05□□□□□ -1.76
ERCC3-204ENST00000456257 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
ERCC3-204ENST00000456257 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
ERCC3-204ENST00000456257 HERC1Q15751 4861 aa4.03□□□□□ -1.76
ERCC3-204ENST00000456257 IGKV2-30P06310 120 aa4.03□□□□□ -1.76
ERCC3-204ENST00000456257 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
ERCC3-204ENST00000456257 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
ERCC3-204ENST00000456257 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
ERCC3-204ENST00000456257 MYCBP2O75592 4640 aa4.02□□□□□ -1.77
ERCC3-204ENST00000456257 SEC61GP60059 68 aa4.01□□□□□ -1.77
ERCC3-204ENST00000456257 C9orf92A6NGG3 77 aa4□□□□□ -1.77
ERCC3-204ENST00000456257 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
ERCC3-204ENST00000456257 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
ERCC3-204ENST00000456257 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
ERCC3-204ENST00000456257 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
ERCC3-204ENST00000456257 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms