RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 COL12A1Q99715 3063 aa8.78□□□□□ -1
HNRNPU-205ENST00000444376 TACC2O95359 2948 aa8.78□□□□□ -1
HNRNPU-205ENST00000444376 ATMQ13315 3056 aa8.75□□□□□ -1.01
HNRNPU-205ENST00000444376 DMXL2Q8TDJ6 3036 aa8.71□□□□□ -1.01
HNRNPU-205ENST00000444376 PP632Q6XCG6 107 aa8.71□□□□□ -1.01
HNRNPU-205ENST00000444376 XP32Q5T750 250 aa8.7□□□□□ -1.02
HNRNPU-205ENST00000444376 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
HNRNPU-205ENST00000444376 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
HNRNPU-205ENST00000444376 H0YAA0 97 aa8.67□□□□□ -1.02
HNRNPU-205ENST00000444376 CELSR3Q9NYQ7 3312 aa8.67□□□□□ -1.02
HNRNPU-205ENST00000444376 LAMA1P25391 3075 aa8.65□□□□□ -1.02
HNRNPU-205ENST00000444376 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.03
HNRNPU-205ENST00000444376 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
HNRNPU-205ENST00000444376 KMT2BQ9UMN6 2715 aaPredicted RBP8.64□□□□□ -1.03
HNRNPU-205ENST00000444376 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
HNRNPU-205ENST00000444376 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
HNRNPU-205ENST00000444376 VCANP13611 3396 aa8.61□□□□□ -1.03
HNRNPU-205ENST00000444376 APCP25054 2843 aa8.57□□□□□ -1.04
HNRNPU-205ENST00000444376 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
HNRNPU-205ENST00000444376 BOD1L1Q8NFC6 3051 aa8.54□□□□□ -1.04
HNRNPU-205ENST00000444376 P0C880 135 aa8.53□□□□□ -1.04
HNRNPU-205ENST00000444376 DMXL1Q9Y485 3027 aa8.48□□□□□ -1.05
HNRNPU-205ENST00000444376 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
HNRNPU-205ENST00000444376 LRBAP50851 2863 aa8.47□□□□□ -1.05
HNRNPU-205ENST00000444376 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
HNRNPU-205ENST00000444376 KALRNO60229 2985 aa8.41□□□□□ -1.06
HNRNPU-205ENST00000444376 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
HNRNPU-205ENST00000444376 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
HNRNPU-205ENST00000444376 SPTBN5Q9NRC6 3674 aaKnown RBP8.38□□□□□ -1.07
HNRNPU-205ENST00000444376 FREM2Q5SZK8 3169 aa8.37□□□□□ -1.07
HNRNPU-205ENST00000444376 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
HNRNPU-205ENST00000444376 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
HNRNPU-205ENST00000444376 DNAH14Q0VDD8 3507 aa8.35□□□□□ -1.07
HNRNPU-205ENST00000444376 CFAP47Q6ZTR5 3102 aa8.34□□□□□ -1.07
HNRNPU-205ENST00000444376 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
HNRNPU-205ENST00000444376 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.082e-6■□□□□ 9
HNRNPU-205ENST00000444376 SPEGQ15772 3267 aa8.28□□□□□ -1.08
HNRNPU-205ENST00000444376 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
HNRNPU-205ENST00000444376 DCHS2Q6V1P9 2916 aa8.22□□□□□ -1.09
HNRNPU-205ENST00000444376 ASH1LQ9NR48 2969 aaKnown RBP8.2□□□□□ -1.1
HNRNPU-205ENST00000444376 ZANQ9Y493 2812 aa8.18□□□□□ -1.1
HNRNPU-205ENST00000444376 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
HNRNPU-205ENST00000444376 NF1P21359 2839 aa8.17□□□□□ -1.1
HNRNPU-205ENST00000444376 TENM2Q9NT68 2774 aa8.15□□□□□ -1.1
HNRNPU-205ENST00000444376 TENM1Q9UKZ4 2725 aa8.11□□□□□ -1.11
HNRNPU-205ENST00000444376 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
HNRNPU-205ENST00000444376 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
HNRNPU-205ENST00000444376 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
HNRNPU-205ENST00000444376 LOC400499M0QZD8 3231 aa8□□□□□ -1.13
HNRNPU-205ENST00000444376 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
HNRNPU-205ENST00000444376 KRTAP12-1P59990 96 aa7.97□□□□□ -1.13
HNRNPU-205ENST00000444376 HRNRQ86YZ3 2850 aaPredicted RBP7.95□□□□□ -1.14
HNRNPU-205ENST00000444376 DCHS1Q96JQ0 3298 aa7.92□□□□□ -1.14
HNRNPU-205ENST00000444376 MYO15AQ9UKN7 3530 aa7.91□□□□□ -1.14
HNRNPU-205ENST00000444376 FBN2P35556 2912 aa7.9□□□□□ -1.14
HNRNPU-205ENST00000444376 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
HNRNPU-205ENST00000444376 NBPF19A0A087WUL8 3843 aa7.85□□□□□ -1.15
HNRNPU-205ENST00000444376 CELSR1Q9NYQ6 3014 aa7.82□□□□□ -1.16
HNRNPU-205ENST00000444376 RELNP78509 3460 aa7.8□□□□□ -1.16
HNRNPU-205ENST00000444376 PDZD2O15018 2839 aa7.77□□□□□ -1.16
HNRNPU-205ENST00000444376 VWFP04275 2813 aa7.75□□□□□ -1.17
HNRNPU-205ENST00000444376 ZFHX3Q15911 3703 aa7.74□□□□□ -1.17
HNRNPU-205ENST00000444376 KRTAP15-1Q3LI76 137 aa7.74□□□□□ -1.17
HNRNPU-205ENST00000444376 TGP01266 2768 aa7.73□□□□□ -1.17
HNRNPU-205ENST00000444376 OTOGQ6ZRI0 2925 aa7.69□□□□□ -1.18
HNRNPU-205ENST00000444376 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
HNRNPU-205ENST00000444376 WDFY3Q8IZQ1 3526 aa7.63□□□□□ -1.19
HNRNPU-205ENST00000444376 LAMA5O15230 3695 aa7.61□□□□□ -1.19
HNRNPU-205ENST00000444376 ASPMQ8IZT6 3477 aa7.59□□□□□ -1.19
HNRNPU-205ENST00000444376 FBN1P35555 2871 aaKnown RBP7.52□□□□□ -1.21
HNRNPU-205ENST00000444376 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
HNRNPU-205ENST00000444376 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
HNRNPU-205ENST00000444376 DMDP11532 3685 aa7.39□□□□□ -1.23
HNRNPU-205ENST00000444376 INE1O15225 51 aa7.39□□□□□ -1.23
HNRNPU-205ENST00000444376 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
HNRNPU-205ENST00000444376 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
HNRNPU-205ENST00000444376 SMG1Q96Q15 3661 aaKnown RBP7.35□□□□□ -1.23
HNRNPU-205ENST00000444376 ANK3Q12955 4377 aaKnown RBP7.32□□□□□ -1.24
HNRNPU-205ENST00000444376 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
HNRNPU-205ENST00000444376 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
HNRNPU-205ENST00000444376 FBN3Q75N90 2809 aa7.3□□□□□ -1.24
HNRNPU-205ENST00000444376 CSMD2Q7Z408 3487 aa7.27□□□□□ -1.25
HNRNPU-205ENST00000444376 ZFHX4Q86UP3 3567 aa7.27□□□□□ -1.25
HNRNPU-205ENST00000444376 CSMD1Q96PZ7 3565 aa7.27□□□□□ -1.25
HNRNPU-205ENST00000444376 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
HNRNPU-205ENST00000444376 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
HNRNPU-205ENST00000444376 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
HNRNPU-205ENST00000444376 COL7A1Q02388 2944 aa7.08□□□□□ -1.28
HNRNPU-205ENST00000444376 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
HNRNPU-205ENST00000444376 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
HNRNPU-205ENST00000444376 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
HNRNPU-205ENST00000444376 HUWE1Q7Z6Z7 4374 aaKnown RBP7.07□□□□□ -1.28
HNRNPU-205ENST00000444376 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
HNRNPU-205ENST00000444376 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
HNRNPU-205ENST00000444376 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
HNRNPU-205ENST00000444376 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
HNRNPU-205ENST00000444376 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
HNRNPU-205ENST00000444376 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.32
HNRNPU-205ENST00000444376 BSNQ9UPA5 3926 aa6.81□□□□□ -1.32
HNRNPU-205ENST00000444376 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms