RNA–Protein interactions for RNA: ENST00000444007.1

PSMD1-206, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-206ENST00000444007 M0R2T5 61 aa1.34□□□□□ -2.19
PSMD1-206ENST00000444007 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
PSMD1-206ENST00000444007 CHD6Q8TD26 2715 aa1.33□□□□□ -2.2
PSMD1-206ENST00000444007 COL6A3P12111 3177 aa1.33□□□□□ -2.2
PSMD1-206ENST00000444007 CRYBG3Q68DQ2 2970 aa1.32□□□□□ -2.2
PSMD1-206ENST00000444007 DNAH11Q96DT5 4516 aa1.31□□□□□ -2.2
PSMD1-206ENST00000444007 C9orf92A6NGG3 77 aa1.3□□□□□ -2.2
PSMD1-206ENST00000444007 MEGF8Q7Z7M0 2845 aa1.3□□□□□ -2.2
PSMD1-206ENST00000444007 TNRC18O15417 2968 aaPredicted RBP1.3□□□□□ -2.2
PSMD1-206ENST00000444007 CELSR1Q9NYQ6 3014 aa1.3□□□□□ -2.2
PSMD1-206ENST00000444007 POLQO75417 2590 aa1.29□□□□□ -2.2
PSMD1-206ENST00000444007 NBPF19A0A087WUL8 3843 aa1.29□□□□□ -2.2
PSMD1-206ENST00000444007 SETD2Q9BYW2 2564 aaPredicted RBP1.28□□□□□ -2.2
PSMD1-206ENST00000444007 DEFB4AO15263 64 aa1.28□□□□□ -2.2
PSMD1-206ENST00000444007 VWFP04275 2813 aa1.28□□□□□ -2.2
PSMD1-206ENST00000444007 PIEZO1Q92508 2521 aa1.27□□□□□ -2.21
PSMD1-206ENST00000444007 AKAP9Q99996 3911 aa1.26□□□□□ -2.21
PSMD1-206ENST00000444007 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
PSMD1-206ENST00000444007 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
PSMD1-206ENST00000444007 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
PSMD1-206ENST00000444007 ZFHX4Q86UP3 3567 aa1.26□□□□□ -2.21
PSMD1-206ENST00000444007 ATRQ13535 2644 aa1.25□□□□□ -2.21
PSMD1-206ENST00000444007 MYCBP2O75592 4640 aa1.25□□□□□ -2.21
PSMD1-206ENST00000444007 FAM186AA6NE01 2351 aa1.24□□□□□ -2.21
PSMD1-206ENST00000444007 PTPN13Q12923 2485 aa1.24□□□□□ -2.21
PSMD1-206ENST00000444007 CSMD3Q7Z407 3707 aa1.24□□□□□ -2.21
PSMD1-206ENST00000444007 RIF1Q5UIP0 2472 aaKnown RBP1.23□□□□□ -2.21
PSMD1-206ENST00000444007 SONP18583 2426 aaKnown RBP1.23□□□□□ -2.21
PSMD1-206ENST00000444007 SPG11Q96JI7 2443 aa1.23□□□□□ -2.21
PSMD1-206ENST00000444007 CHD9Q3L8U1 2897 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 CEP350Q5VT06 3117 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 PRUNE2Q8WUY3 3088 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 LRRK2Q5S007 2527 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 RANBP2P49792 3224 aaKnown RBP1.22□□□□□ -2.21
PSMD1-206ENST00000444007 LYSTQ99698 3801 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 ITPR1Q14643 2758 aa1.22□□□□□ -2.21
PSMD1-206ENST00000444007 ANKHD1Q8IWZ3 2542 aaKnown RBP1.22□□□□□ -2.21
PSMD1-206ENST00000444007 HIVEP3Q5T1R4 2406 aa1.21□□□□□ -2.22
PSMD1-206ENST00000444007 CHD8Q9HCK8 2581 aa1.21□□□□□ -2.22
PSMD1-206ENST00000444007 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
PSMD1-206ENST00000444007 BDP1A6H8Y1 2624 aa1.2□□□□□ -2.22
PSMD1-206ENST00000444007 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
PSMD1-206ENST00000444007 FRYLO94915 3013 aa1.2□□□□□ -2.22
PSMD1-206ENST00000444007 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
PSMD1-206ENST00000444007 CFAP54Q96N23 3096 aa1.19□□□□□ -2.22
PSMD1-206ENST00000444007 C5orf42Q9H799 3197 aa1.19□□□□□ -2.22
PSMD1-206ENST00000444007 USP9YO00507 2555 aaPredicted RBP1.19□□□□□ -2.22
PSMD1-206ENST00000444007 EPG5Q9HCE0 2579 aa1.19□□□□□ -2.22
PSMD1-206ENST00000444007 SZT2Q5T011 3432 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 SACSQ9NZJ4 4579 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 MTORP42345 2549 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 NCOR2Q9Y618 2525 aa1.18□□□□□ -2.22
PSMD1-206ENST00000444007 U3KQA8 63 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 MAP1AP78559 2803 aaPredicted RBP1.17□□□□□ -2.22
PSMD1-206ENST00000444007 COL7A1Q02388 2944 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 DCHS2Q6V1P9 2916 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 GCN1Q92616 2671 aaKnown RBP1.17□□□□□ -2.22
PSMD1-206ENST00000444007 FRYQ5TBA9 3013 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 TENM4Q6N022 2769 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 DNAH8Q96JB1 4490 aa1.17□□□□□ -2.22
PSMD1-206ENST00000444007 ZNF469Q96JG9 3925 aaPredicted RBP1.16□□□□□ -2.22
PSMD1-206ENST00000444007 ACANP16112 2415 aa1.16□□□□□ -2.22
PSMD1-206ENST00000444007 SETXQ7Z333 2677 aaKnown RBP1.16□□□□□ -2.22
PSMD1-206ENST00000444007 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
PSMD1-206ENST00000444007 CACNA1AO00555 2505 aa1.16□□□□□ -2.22
PSMD1-206ENST00000444007 NF1P21359 2839 aa1.16□□□□□ -2.22
PSMD1-206ENST00000444007 DNAH3Q8TD57 4116 aa1.15□□□□□ -2.22
PSMD1-206ENST00000444007 ITPR3Q14573 2671 aa1.15□□□□□ -2.23
PSMD1-206ENST00000444007 HELZ2Q9BYK8 2649 aaKnown RBP1.15□□□□□ -2.23
PSMD1-206ENST00000444007 SPENQ96T58 3664 aaKnown RBP1.14□□□□□ -2.23
PSMD1-206ENST00000444007 NBEAQ8NFP9 2946 aa1.14□□□□□ -2.23
PSMD1-206ENST00000444007 SMR3AQ99954 134 aa1.14□□□□□ -2.23
PSMD1-206ENST00000444007 MKI67P46013 3256 aaKnown RBP1.14□□□□□ -2.23
PSMD1-206ENST00000444007 TRIOO75962 3097 aa1.14□□□□□ -2.23
PSMD1-206ENST00000444007 COL12A1Q99715 3063 aa1.14□□□□□ -2.23
PSMD1-206ENST00000444007 HTTP42858 3142 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
PSMD1-206ENST00000444007 RELNP78509 3460 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 ANK2Q01484 3957 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 PDZD2O15018 2839 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 FLNCQ14315 2725 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 LRBAP50851 2863 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 DMXL1Q9Y485 3027 aa1.13□□□□□ -2.23
PSMD1-206ENST00000444007 DNAH7Q8WXX0 4024 aa1.12□□□□□ -2.23
PSMD1-206ENST00000444007 DMDP11532 3685 aa1.12□□□□□ -2.23
PSMD1-206ENST00000444007 PRM1P04553 51 aa1.12□□□□□ -2.23
PSMD1-206ENST00000444007 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
PSMD1-206ENST00000444007 ZZEF1O43149 2961 aa1.12□□□□□ -2.23
PSMD1-206ENST00000444007 UTP20O75691 2785 aaKnown RBP1.12□□□□□ -2.23
PSMD1-206ENST00000444007 CFAP46Q8IYW2 2715 aa1.11□□□□□ -2.23
PSMD1-206ENST00000444007 BOD1L1Q8NFC6 3051 aa1.11□□□□□ -2.23
PSMD1-206ENST00000444007 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
PSMD1-206ENST00000444007 TGP01266 2768 aa1.1□□□□□ -2.23
PSMD1-206ENST00000444007 FAT2Q9NYQ8 4349 aa1.1□□□□□ -2.23
PSMD1-206ENST00000444007 ATMQ13315 3056 aa1.1□□□□□ -2.23
PSMD1-206ENST00000444007 VPS13AQ96RL7 3174 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms