RNA–Protein interactions for RNA: ENST00000444007.1

PSMD1-206, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-206ENST00000444007 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
PSMD1-206ENST00000444007 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
PSMD1-206ENST00000444007 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
PSMD1-206ENST00000444007 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
PSMD1-206ENST00000444007 FOXD1Q16676 465 aa18.09■□□□□ 0.49
PSMD1-206ENST00000444007 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
PSMD1-206ENST00000444007 MSH5O43196 834 aa17.11■□□□□ 0.33
PSMD1-206ENST00000444007 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
PSMD1-206ENST00000444007 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
PSMD1-206ENST00000444007 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
PSMD1-206ENST00000444007 ADRA2BP18089 450 aa16.46■□□□□ 0.23
PSMD1-206ENST00000444007 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
PSMD1-206ENST00000444007 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
PSMD1-206ENST00000444007 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
PSMD1-206ENST00000444007 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
PSMD1-206ENST00000444007 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
PSMD1-206ENST00000444007 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
PSMD1-206ENST00000444007 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
PSMD1-206ENST00000444007 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
PSMD1-206ENST00000444007 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
PSMD1-206ENST00000444007 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
PSMD1-206ENST00000444007 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
PSMD1-206ENST00000444007 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
PSMD1-206ENST00000444007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■□□□ 11.9
PSMD1-206ENST00000444007 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
PSMD1-206ENST00000444007 POTEHQ6S545 545 aa13.64□□□□□ -0.23
PSMD1-206ENST00000444007 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
PSMD1-206ENST00000444007 DSG3P32926 999 aa13.48□□□□□ -0.25
PSMD1-206ENST00000444007 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
PSMD1-206ENST00000444007 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
PSMD1-206ENST00000444007 CAPN15O75808 1086 aa13.4□□□□□ -0.26
PSMD1-206ENST00000444007 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
PSMD1-206ENST00000444007 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
PSMD1-206ENST00000444007 ABCB7O75027 752 aa13.05□□□□□ -0.32
PSMD1-206ENST00000444007 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
PSMD1-206ENST00000444007 APLP2Q06481 763 aa13.01□□□□□ -0.33
PSMD1-206ENST00000444007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
PSMD1-206ENST00000444007 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
PSMD1-206ENST00000444007 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
PSMD1-206ENST00000444007 KCNA4P22459 653 aa12.83□□□□□ -0.36
PSMD1-206ENST00000444007 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
PSMD1-206ENST00000444007 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
PSMD1-206ENST00000444007 POLA2Q14181 598 aa12.63□□□□□ -0.39
PSMD1-206ENST00000444007 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
PSMD1-206ENST00000444007 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
PSMD1-206ENST00000444007 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
PSMD1-206ENST00000444007 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
PSMD1-206ENST00000444007 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
PSMD1-206ENST00000444007 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
PSMD1-206ENST00000444007 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
PSMD1-206ENST00000444007 HAX1O00165 279 aa12.25□□□□□ -0.45
PSMD1-206ENST00000444007 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
PSMD1-206ENST00000444007 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■□□□□ 9.9
PSMD1-206ENST00000444007 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
PSMD1-206ENST00000444007 EVX2Q03828 476 aa12.11□□□□□ -0.47
PSMD1-206ENST00000444007 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
PSMD1-206ENST00000444007 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
PSMD1-206ENST00000444007 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
PSMD1-206ENST00000444007 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
PSMD1-206ENST00000444007 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
PSMD1-206ENST00000444007 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
PSMD1-206ENST00000444007 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
PSMD1-206ENST00000444007 ZBTB22O15209 634 aa11.81□□□□□ -0.52
PSMD1-206ENST00000444007 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
PSMD1-206ENST00000444007 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
PSMD1-206ENST00000444007 FBLN2P98095 1184 aa11.8□□□□□ -0.52
PSMD1-206ENST00000444007 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
PSMD1-206ENST00000444007 GABBR2O75899 941 aa11.79□□□□□ -0.52
PSMD1-206ENST00000444007 LHX8Q68G74 356 aa11.77□□□□□ -0.53
PSMD1-206ENST00000444007 SSUH2Q9Y2M2 353 aa11.71□□□□□ -0.53
PSMD1-206ENST00000444007 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
PSMD1-206ENST00000444007 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
PSMD1-206ENST00000444007 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
PSMD1-206ENST00000444007 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
PSMD1-206ENST00000444007 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
PSMD1-206ENST00000444007 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
PSMD1-206ENST00000444007 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
PSMD1-206ENST00000444007 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
PSMD1-206ENST00000444007 CLCN6P51797 869 aa11.43□□□□□ -0.58
PSMD1-206ENST00000444007 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
PSMD1-206ENST00000444007 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
PSMD1-206ENST00000444007 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
PSMD1-206ENST00000444007 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
PSMD1-206ENST00000444007 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
PSMD1-206ENST00000444007 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
PSMD1-206ENST00000444007 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
PSMD1-206ENST00000444007 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
PSMD1-206ENST00000444007 POTEMA6NI47 508 aa11.1□□□□□ -0.63
PSMD1-206ENST00000444007 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
PSMD1-206ENST00000444007 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
PSMD1-206ENST00000444007 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
PSMD1-206ENST00000444007 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
PSMD1-206ENST00000444007 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
PSMD1-206ENST00000444007 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
PSMD1-206ENST00000444007 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
PSMD1-206ENST00000444007 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
PSMD1-206ENST00000444007 ASTLQ6HA08 431 aaPredicted RBP10.93□□□□□ -0.66
PSMD1-206ENST00000444007 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
PSMD1-206ENST00000444007 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
PSMD1-206ENST00000444007 ATMINO43313 823 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms