RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 A0A087WSZ3 146 aa6□□□□□ -1.45
HLA-DMB-259ENST00000438510 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
HLA-DMB-259ENST00000438510 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
HLA-DMB-259ENST00000438510 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
HLA-DMB-259ENST00000438510 RETNLBQ9BQ08 111 aa6□□□□□ -1.45
HLA-DMB-259ENST00000438510 PRR4Q16378 134 aa5.99□□□□□ -1.45
HLA-DMB-259ENST00000438510 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
HLA-DMB-259ENST00000438510 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
HLA-DMB-259ENST00000438510 UBL5Q9BZL1 73 aa5.99□□□□□ -1.45
HLA-DMB-259ENST00000438510 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
HLA-DMB-259ENST00000438510 C1orf195Q5TG92 126 aa5.95□□□□□ -1.46
HLA-DMB-259ENST00000438510 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
HLA-DMB-259ENST00000438510 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
HLA-DMB-259ENST00000438510 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
HLA-DMB-259ENST00000438510 CXCL6P80162 114 aa5.93□□□□□ -1.46
HLA-DMB-259ENST00000438510 ATOX1O00244 68 aa5.92□□□□□ -1.46
HLA-DMB-259ENST00000438510 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
HLA-DMB-259ENST00000438510 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
HLA-DMB-259ENST00000438510 HMCN2Q8NDA2 5059 aa5.9□□□□□ -1.46
HLA-DMB-259ENST00000438510 Q96NJ1 140 aa5.9□□□□□ -1.46
HLA-DMB-259ENST00000438510 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
HLA-DMB-259ENST00000438510 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 J3KT08 172 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 NREPQ16612 68 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
HLA-DMB-259ENST00000438510 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
HLA-DMB-259ENST00000438510 Q6ZVQ6 151 aa5.86□□□□□ -1.47
HLA-DMB-259ENST00000438510 UQCRQO14949 82 aa5.85□□□□□ -1.47
HLA-DMB-259ENST00000438510 DEFB116Q30KQ4 102 aa5.85□□□□□ -1.47
HLA-DMB-259ENST00000438510 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
HLA-DMB-259ENST00000438510 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
HLA-DMB-259ENST00000438510 NDUFB1O75438 58 aa5.82□□□□□ -1.48
HLA-DMB-259ENST00000438510 LPAP08519 4548 aa5.81□□□□□ -1.48
HLA-DMB-259ENST00000438510 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
HLA-DMB-259ENST00000438510 BPY2O14599 106 aa5.81□□□□□ -1.48
HLA-DMB-259ENST00000438510 COX7CP15954 63 aa5.81□□□□□ -1.48
HLA-DMB-259ENST00000438510 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
HLA-DMB-259ENST00000438510 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
HLA-DMB-259ENST00000438510 A8MWP4 228 aa5.8□□□□□ -1.48
HLA-DMB-259ENST00000438510 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
HLA-DMB-259ENST00000438510 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
HLA-DMB-259ENST00000438510 LINC00313P59037 77 aa5.78□□□□□ -1.48
HLA-DMB-259ENST00000438510 DSCR10P59022 87 aa5.77□□□□□ -1.49
HLA-DMB-259ENST00000438510 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
HLA-DMB-259ENST00000438510 LRP2P98164 4655 aa5.77□□□□□ -1.49
HLA-DMB-259ENST00000438510 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
HLA-DMB-259ENST00000438510 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
HLA-DMB-259ENST00000438510 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
HLA-DMB-259ENST00000438510 K7EQZ3 153 aa5.74□□□□□ -1.49
HLA-DMB-259ENST00000438510 A0A087WVE0 104 aa5.73□□□□□ -1.49
HLA-DMB-259ENST00000438510 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
HLA-DMB-259ENST00000438510 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
HLA-DMB-259ENST00000438510 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
HLA-DMB-259ENST00000438510 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
HLA-DMB-259ENST00000438510 Q75L30 129 aa5.71□□□□□ -1.5
HLA-DMB-259ENST00000438510 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
HLA-DMB-259ENST00000438510 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
HLA-DMB-259ENST00000438510 NDUFC1O43677 76 aa5.7□□□□□ -1.5
HLA-DMB-259ENST00000438510 Q8N9L7 120 aa5.7□□□□□ -1.5
HLA-DMB-259ENST00000438510 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
HLA-DMB-259ENST00000438510 MMP24-AS1A0A0U1RRL7 71 aa5.69□□□□□ -1.5
HLA-DMB-259ENST00000438510 A8MUU9 505 aa5.69□□□□□ -1.5
HLA-DMB-259ENST00000438510 TMEM258P61165 79 aa5.69□□□□□ -1.5
HLA-DMB-259ENST00000438510 KLKP1Q107X0 134 aa5.68□□□□□ -1.5
HLA-DMB-259ENST00000438510 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
HLA-DMB-259ENST00000438510 hDV103S1A0JD37 113 aa5.67□□□□□ -1.5
HLA-DMB-259ENST00000438510 MUC17Q685J3 4493 aa5.67□□□□□ -1.5
HLA-DMB-259ENST00000438510 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
HLA-DMB-259ENST00000438510 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
HLA-DMB-259ENST00000438510 HCG22E2RYF7 251 aa5.65□□□□□ -1.5
HLA-DMB-259ENST00000438510 CASC2Q6XLA1 102 aa5.65□□□□□ -1.5
HLA-DMB-259ENST00000438510 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
HLA-DMB-259ENST00000438510 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
HLA-DMB-259ENST00000438510 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
HLA-DMB-259ENST00000438510 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
HLA-DMB-259ENST00000438510 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
HLA-DMB-259ENST00000438510 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
HLA-DMB-259ENST00000438510 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
HLA-DMB-259ENST00000438510 NDUFS5O43920 106 aa5.61□□□□□ -1.51
HLA-DMB-259ENST00000438510 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
HLA-DMB-259ENST00000438510 C20orf197Q8N268 126 aa5.6□□□□□ -1.51
HLA-DMB-259ENST00000438510 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
HLA-DMB-259ENST00000438510 H3BPC8 53 aa5.59□□□□□ -1.51
HLA-DMB-259ENST00000438510 ZCCHC13Q8WW36 166 aaKnown RBP5.58□□□□□ -1.52
HLA-DMB-259ENST00000438510 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
HLA-DMB-259ENST00000438510 H7BZZ5 65 aa5.55□□□□□ -1.52
HLA-DMB-259ENST00000438510 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
HLA-DMB-259ENST00000438510 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
HLA-DMB-259ENST00000438510 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
HLA-DMB-259ENST00000438510 MP68P56378 58 aa5.53□□□□□ -1.52
HLA-DMB-259ENST00000438510 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
HLA-DMB-259ENST00000438510 MUC2Q02817 5179 aa5.49□□□□□ -1.53
HLA-DMB-259ENST00000438510 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
HLA-DMB-259ENST00000438510 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
HLA-DMB-259ENST00000438510 Q5W150 140 aa5.48□□□□□ -1.53
HLA-DMB-259ENST00000438510 CYSTM1Q9H1C7 97 aa5.48□□□□□ -1.53
HLA-DMB-259ENST00000438510 SPINK7P58062 85 aa5.47□□□□□ -1.53
HLA-DMB-259ENST00000438510 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms