RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 BOD1L1Q8NFC6 3051 aa10.01□□□□□ -0.81
ARHGEF28-204ENST00000437974 ADGRG4Q8IZF6 3080 aa9.99□□□□□ -0.81
ARHGEF28-204ENST00000437974 TNP1P09430 55 aa9.97□□□□□ -0.81
ARHGEF28-204ENST00000437974 SPTBN5Q9NRC6 3674 aaKnown RBP9.96□□□□□ -0.81
ARHGEF28-204ENST00000437974 TACC2O95359 2948 aa9.95□□□□□ -0.82
ARHGEF28-204ENST00000437974 COL12A1Q99715 3063 aa9.94□□□□□ -0.82
ARHGEF28-204ENST00000437974 FRYLO94915 3013 aa9.91□□□□□ -0.82
ARHGEF28-204ENST00000437974 UTP20O75691 2785 aaKnown RBP9.9□□□□□ -0.82
ARHGEF28-204ENST00000437974 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
ARHGEF28-204ENST00000437974 FLNCQ14315 2725 aa9.87□□□□□ -0.83
ARHGEF28-204ENST00000437974 HIVEP1P15822 2718 aa9.86□□□□□ -0.83
ARHGEF28-204ENST00000437974 APCP25054 2843 aa9.86□□□□□ -0.83
ARHGEF28-204ENST00000437974 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
ARHGEF28-204ENST00000437974 XP32Q5T750 250 aa9.84□□□□□ -0.83
ARHGEF28-204ENST00000437974 CFAP47Q6ZTR5 3102 aa9.83□□□□□ -0.84
ARHGEF28-204ENST00000437974 ASH1LQ9NR48 2969 aaKnown RBP9.82□□□□□ -0.84
ARHGEF28-204ENST00000437974 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
ARHGEF28-204ENST00000437974 REV3LO60673 3130 aa9.77□□□□□ -0.84
ARHGEF28-204ENST00000437974 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
ARHGEF28-204ENST00000437974 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
ARHGEF28-204ENST00000437974 EYSQ5T1H1 3165 aa9.74□□□□□ -0.85
ARHGEF28-204ENST00000437974 USP34Q70CQ2 3546 aa9.74□□□□□ -0.85
ARHGEF28-204ENST00000437974 SPEGQ15772 3267 aa9.72□□□□□ -0.85
ARHGEF28-204ENST00000437974 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
ARHGEF28-204ENST00000437974 ZZEF1O43149 2961 aa9.71□□□□□ -0.86
ARHGEF28-204ENST00000437974 CRYBG3Q68DQ2 2970 aa9.7□□□□□ -0.86
ARHGEF28-204ENST00000437974 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
ARHGEF28-204ENST00000437974 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
ARHGEF28-204ENST00000437974 NDUFAF8A1L188 74 aa9.64□□□□□ -0.87
ARHGEF28-204ENST00000437974 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
ARHGEF28-204ENST00000437974 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.87
ARHGEF28-204ENST00000437974 CELSR2Q9HCU4 2923 aa9.59□□□□□ -0.87
ARHGEF28-204ENST00000437974 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF28-204ENST00000437974 PP632Q6XCG6 107 aa9.59□□□□□ -0.87
ARHGEF28-204ENST00000437974 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
ARHGEF28-204ENST00000437974 DMXL1Q9Y485 3027 aa9.52□□□□□ -0.89
ARHGEF28-204ENST00000437974 H0YAA0 97 aa9.5□□□□□ -0.89
ARHGEF28-204ENST00000437974 PRO2289Q9P1D8 64 aa9.5□□□□□ -0.89
ARHGEF28-204ENST00000437974 ZANQ9Y493 2812 aa9.5□□□□□ -0.89
ARHGEF28-204ENST00000437974 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
ARHGEF28-204ENST00000437974 DCHS2Q6V1P9 2916 aa9.48□□□□□ -0.89
ARHGEF28-204ENST00000437974 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.89
ARHGEF28-204ENST00000437974 LOC400499M0QZD8 3231 aa9.44□□□□□ -0.9
ARHGEF28-204ENST00000437974 FBN2P35556 2912 aa9.34□□□□□ -0.91
ARHGEF28-204ENST00000437974 TENM1Q9UKZ4 2725 aa9.29□□□□□ -0.92
ARHGEF28-204ENST00000437974 TENM3Q9P273 2699 aa9.27□□□□□ -0.93
ARHGEF28-204ENST00000437974 P0C880 135 aa9.26□□□□□ -0.93
ARHGEF28-204ENST00000437974 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
ARHGEF28-204ENST00000437974 NF1P21359 2839 aa9.18□□□□□ -0.94
ARHGEF28-204ENST00000437974 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
ARHGEF28-204ENST00000437974 RELNP78509 3460 aa9.15□□□□□ -0.94
ARHGEF28-204ENST00000437974 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
ARHGEF28-204ENST00000437974 CELSR1Q9NYQ6 3014 aa9.14□□□□□ -0.95
ARHGEF28-204ENST00000437974 ZFHX4Q86UP3 3567 aa9.08□□□□□ -0.96
ARHGEF28-204ENST00000437974 TGP01266 2768 aa9.01□□□□□ -0.97
ARHGEF28-204ENST00000437974 MXRA5Q9NR99 2828 aa9□□□□□ -0.97
ARHGEF28-204ENST00000437974 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
ARHGEF28-204ENST00000437974 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
ARHGEF28-204ENST00000437974 CSMD1Q96PZ7 3565 aa8.93□□□□□ -0.98
ARHGEF28-204ENST00000437974 LAMA5O15230 3695 aa8.93□□□□□ -0.98
ARHGEF28-204ENST00000437974 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
ARHGEF28-204ENST00000437974 PKD1L1Q8TDX9 2849 aa8.87□□□□□ -0.99
ARHGEF28-204ENST00000437974 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
ARHGEF28-204ENST00000437974 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
ARHGEF28-204ENST00000437974 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
ARHGEF28-204ENST00000437974 PDZD2O15018 2839 aa8.79□□□□□ -1
ARHGEF28-204ENST00000437974 DMDP11532 3685 aa8.77□□□□□ -1
ARHGEF28-204ENST00000437974 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
ARHGEF28-204ENST00000437974 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
ARHGEF28-204ENST00000437974 VWFP04275 2813 aa8.71□□□□□ -1.01
ARHGEF28-204ENST00000437974 SVEP1Q4LDE5 3571 aa8.58□□□□□ -1.04
ARHGEF28-204ENST00000437974 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
ARHGEF28-204ENST00000437974 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
ARHGEF28-204ENST00000437974 OTOGQ6ZRI0 2925 aa8.5□□□□□ -1.05
ARHGEF28-204ENST00000437974 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
ARHGEF28-204ENST00000437974 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
ARHGEF28-204ENST00000437974 ZFHX3Q15911 3703 aa8.43□□□□□ -1.06
ARHGEF28-204ENST00000437974 SPENQ96T58 3664 aaKnown RBP8.42□□□□□ -1.06
ARHGEF28-204ENST00000437974 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
ARHGEF28-204ENST00000437974 MUC3AQ02505 3323 aa8.35□□□□□ -1.07
ARHGEF28-204ENST00000437974 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
ARHGEF28-204ENST00000437974 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
ARHGEF28-204ENST00000437974 SRRM2Q9UQ35 2752 aaKnown RBP8.31□□□□□ -1.08
ARHGEF28-204ENST00000437974 FBN3Q75N90 2809 aa8.31□□□□□ -1.08
ARHGEF28-204ENST00000437974 BSNQ9UPA5 3926 aa8.28□□□□□ -1.08
ARHGEF28-204ENST00000437974 CUBNO60494 3623 aa8.28□□□□□ -1.08
ARHGEF28-204ENST00000437974 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
ARHGEF28-204ENST00000437974 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
ARHGEF28-204ENST00000437974 KRTAP4-5Q9BYR2 181 aa8.22□□□□□ -1.09
ARHGEF28-204ENST00000437974 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
ARHGEF28-204ENST00000437974 KRTAP10-12P60413 245 aa8.2□□□□□ -1.1
ARHGEF28-204ENST00000437974 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
ARHGEF28-204ENST00000437974 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
ARHGEF28-204ENST00000437974 VPS13CQ709C8 3753 aa8.08□□□□□ -1.12
ARHGEF28-204ENST00000437974 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
ARHGEF28-204ENST00000437974 COL7A1Q02388 2944 aa8□□□□□ -1.13
ARHGEF28-204ENST00000437974 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
ARHGEF28-204ENST00000437974 INE1O15225 51 aa7.84□□□□□ -1.16
ARHGEF28-204ENST00000437974 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
ARHGEF28-204ENST00000437974 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms