RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 H0YAA0 97 aa4.49□□□□□ -1.69
VPS8-207ENST00000436792 LRBAP50851 2863 aa4.49□□□□□ -1.69
VPS8-207ENST00000436792 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
VPS8-207ENST00000436792 A0A0C4DFX4 3053 aa4.47□□□□□ -1.69
VPS8-207ENST00000436792 COL12A1Q99715 3063 aa4.47□□□□□ -1.69
VPS8-207ENST00000436792 PKD1L1Q8TDX9 2849 aa4.46□□□□□ -1.69
VPS8-207ENST00000436792 RANBP2P49792 3224 aaKnown RBP4.46□□□□□ -1.7
VPS8-207ENST00000436792 WDFY4Q6ZS81 3184 aa4.45□□□□□ -1.7
VPS8-207ENST00000436792 MXRA5Q9NR99 2828 aa4.42□□□□□ -1.7
VPS8-207ENST00000436792 DCHS2Q6V1P9 2916 aa4.42□□□□□ -1.7
VPS8-207ENST00000436792 CELSR2Q9HCU4 2923 aa4.42□□□□□ -1.7
VPS8-207ENST00000436792 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
VPS8-207ENST00000436792 ATMQ13315 3056 aa4.38□□□□□ -1.71
VPS8-207ENST00000436792 PDZD2O15018 2839 aa4.37□□□□□ -1.71
VPS8-207ENST00000436792 PCNTO95613 3336 aa4.36□□□□□ -1.71
VPS8-207ENST00000436792 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
VPS8-207ENST00000436792 FRYLO94915 3013 aa4.35□□□□□ -1.71
VPS8-207ENST00000436792 TRIOO75962 3097 aa4.35□□□□□ -1.71
VPS8-207ENST00000436792 UTRNP46939 3433 aa4.34□□□□□ -1.71
VPS8-207ENST00000436792 EYSQ5T1H1 3165 aa4.33□□□□□ -1.72
VPS8-207ENST00000436792 LAMA2P24043 3122 aaKnown RBP4.33□□□□□ -1.72
VPS8-207ENST00000436792 FBN2P35556 2912 aa4.32□□□□□ -1.72
VPS8-207ENST00000436792 NBEAQ8NFP9 2946 aa4.32□□□□□ -1.72
VPS8-207ENST00000436792 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
VPS8-207ENST00000436792 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
VPS8-207ENST00000436792 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
VPS8-207ENST00000436792 HTTP42858 3142 aa4.28□□□□□ -1.72
VPS8-207ENST00000436792 ZZEF1O43149 2961 aa4.28□□□□□ -1.72
VPS8-207ENST00000436792 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.73
VPS8-207ENST00000436792 USP34Q70CQ2 3546 aa4.27□□□□□ -1.73
VPS8-207ENST00000436792 VWFP04275 2813 aa4.27□□□□□ -1.73
VPS8-207ENST00000436792 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
VPS8-207ENST00000436792 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
VPS8-207ENST00000436792 CFAP54Q96N23 3096 aa4.23□□□□□ -1.73
VPS8-207ENST00000436792 TGP01266 2768 aa4.23□□□□□ -1.73
VPS8-207ENST00000436792 DMXL1Q9Y485 3027 aa4.21□□□□□ -1.73
VPS8-207ENST00000436792 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
VPS8-207ENST00000436792 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
VPS8-207ENST00000436792 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
VPS8-207ENST00000436792 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
VPS8-207ENST00000436792 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
VPS8-207ENST00000436792 UNC80Q8N2C7 3258 aa4.17□□□□□ -1.74
VPS8-207ENST00000436792 ZANQ9Y493 2812 aa4.17□□□□□ -1.74
VPS8-207ENST00000436792 SPTBN5Q9NRC6 3674 aaKnown RBP4.17□□□□□ -1.74
VPS8-207ENST00000436792 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
VPS8-207ENST00000436792 LAMA3Q16787 3333 aa4.16□□□□□ -1.74
VPS8-207ENST00000436792 XIRP2A4UGR9 3374 aa4.15□□□□□ -1.74
VPS8-207ENST00000436792 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
VPS8-207ENST00000436792 H3BS24 57 aa4.09□□□□□ -1.75
VPS8-207ENST00000436792 MKI67P46013 3256 aaKnown RBP4.06□□□□□ -1.76
VPS8-207ENST00000436792 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
VPS8-207ENST00000436792 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
VPS8-207ENST00000436792 VCANP13611 3396 aa4.05□□□□□ -1.76
VPS8-207ENST00000436792 BOD1L1Q8NFC6 3051 aa4.05□□□□□ -1.76
VPS8-207ENST00000436792 OTOGQ6ZRI0 2925 aa4.02□□□□□ -1.77
VPS8-207ENST00000436792 VPS13AQ96RL7 3174 aa4.01□□□□□ -1.77
VPS8-207ENST00000436792 ADGRG4Q8IZF6 3080 aa3.97□□□□□ -1.77
VPS8-207ENST00000436792 FBN1P35555 2871 aaKnown RBP3.97□□□□□ -1.77
VPS8-207ENST00000436792 ZFHX4Q86UP3 3567 aa3.97□□□□□ -1.77
VPS8-207ENST00000436792 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
VPS8-207ENST00000436792 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
VPS8-207ENST00000436792 CDH23Q9H251 3354 aa3.94□□□□□ -1.78
VPS8-207ENST00000436792 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
VPS8-207ENST00000436792 BRCA2P51587 3418 aa3.92□□□□□ -1.78
VPS8-207ENST00000436792 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
VPS8-207ENST00000436792 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
VPS8-207ENST00000436792 DNAH14Q0VDD8 3507 aa3.9□□□□□ -1.79
VPS8-207ENST00000436792 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
VPS8-207ENST00000436792 HRNRQ86YZ3 2850 aaPredicted RBP3.88□□□□□ -1.79
VPS8-207ENST00000436792 SZT2Q5T011 3432 aa3.88□□□□□ -1.79
VPS8-207ENST00000436792 MT1HP80294 61 aa3.87□□□□□ -1.79
VPS8-207ENST00000436792 SPEGQ15772 3267 aa3.85□□□□□ -1.79
VPS8-207ENST00000436792 COL6A3P12111 3177 aa3.84□□□□□ -1.79
VPS8-207ENST00000436792 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
VPS8-207ENST00000436792 WDFY3Q8IZQ1 3526 aa3.81□□□□□ -1.8
VPS8-207ENST00000436792 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
VPS8-207ENST00000436792 HUWE1Q7Z6Z7 4374 aaKnown RBP3.8□□□□□ -1.8
VPS8-207ENST00000436792 MUC3AQ02505 3323 aa3.8□□□□□ -1.8
VPS8-207ENST00000436792 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
VPS8-207ENST00000436792 MYO15AQ9UKN7 3530 aa3.78□□□□□ -1.8
VPS8-207ENST00000436792 SPRR2EP22531 72 aa3.78□□□□□ -1.8
VPS8-207ENST00000436792 SPRR2BP35325 72 aa3.78□□□□□ -1.8
VPS8-207ENST00000436792 SPRR2AP35326 72 aa3.78□□□□□ -1.8
VPS8-207ENST00000436792 FREM2Q5SZK8 3169 aa3.76□□□□□ -1.81
VPS8-207ENST00000436792 MT2AP02795 61 aa3.76□□□□□ -1.81
VPS8-207ENST00000436792 MEGF8Q7Z7M0 2845 aa3.75□□□□□ -1.81
VPS8-207ENST00000436792 CFAP47Q6ZTR5 3102 aa3.72□□□□□ -1.81
VPS8-207ENST00000436792 LCE3AQ5TA76 89 aa3.71□□□□□ -1.81
VPS8-207ENST00000436792 SPRR2DP22532 72 aa3.7□□□□□ -1.82
VPS8-207ENST00000436792 INE1O15225 51 aa3.69□□□□□ -1.82
VPS8-207ENST00000436792 DMDP11532 3685 aa3.69□□□□□ -1.82
VPS8-207ENST00000436792 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
VPS8-207ENST00000436792 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
VPS8-207ENST00000436792 ZFHX3Q15911 3703 aa3.68□□□□□ -1.82
VPS8-207ENST00000436792 DCHS1Q96JQ0 3298 aa3.68□□□□□ -1.82
VPS8-207ENST00000436792 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
VPS8-207ENST00000436792 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
VPS8-207ENST00000436792 LCE2BO14633 110 aa3.63□□□□□ -1.83
VPS8-207ENST00000436792 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
VPS8-207ENST00000436792 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms