RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 DNAH14Q0VDD8 3507 aa4.44□□□□□ -1.7
LINC00649-203ENST00000427447 TENM1Q9UKZ4 2725 aa4.43□□□□□ -1.7
LINC00649-203ENST00000427447 USP34Q70CQ2 3546 aa4.42□□□□□ -1.7
LINC00649-203ENST00000427447 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
LINC00649-203ENST00000427447 BOD1L1Q8NFC6 3051 aa4.42□□□□□ -1.7
LINC00649-203ENST00000427447 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
LINC00649-203ENST00000427447 PLAC8Q9NZF1 115 aa4.4□□□□□ -1.7
LINC00649-203ENST00000427447 HIVEP1P15822 2718 aa4.38□□□□□ -1.71
LINC00649-203ENST00000427447 TNRC18O15417 2968 aaPredicted RBP4.38□□□□□ -1.71
LINC00649-203ENST00000427447 COL6A3P12111 3177 aa4.38□□□□□ -1.71
LINC00649-203ENST00000427447 NIPBLQ6KC79 2804 aaeCLIP4.38□□□□□ -1.71
LINC00649-203ENST00000427447 NBEAQ8NFP9 2946 aa4.37□□□□□ -1.71
LINC00649-203ENST00000427447 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
LINC00649-203ENST00000427447 NBPF19A0A087WUL8 3843 aa4.33□□□□□ -1.72
LINC00649-203ENST00000427447 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
LINC00649-203ENST00000427447 H0YAA0 97 aa4.33□□□□□ -1.72
LINC00649-203ENST00000427447 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
LINC00649-203ENST00000427447 ADGRG4Q8IZF6 3080 aa4.32□□□□□ -1.72
LINC00649-203ENST00000427447 ATMQ13315 3056 aa4.31□□□□□ -1.72
LINC00649-203ENST00000427447 TENM3Q9P273 2699 aa4.31□□□□□ -1.72
LINC00649-203ENST00000427447 VCANP13611 3396 aa4.31□□□□□ -1.72
LINC00649-203ENST00000427447 CDH23Q9H251 3354 aa4.31□□□□□ -1.72
LINC00649-203ENST00000427447 DCHS2Q6V1P9 2916 aa4.3□□□□□ -1.72
LINC00649-203ENST00000427447 SPEGQ15772 3267 aa4.29□□□□□ -1.72
LINC00649-203ENST00000427447 PDZD2O15018 2839 aa4.29□□□□□ -1.72
LINC00649-203ENST00000427447 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
LINC00649-203ENST00000427447 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
LINC00649-203ENST00000427447 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
LINC00649-203ENST00000427447 KRTAP1-3Q8IUG1 177 aa4.24□□□□□ -1.73
LINC00649-203ENST00000427447 MYO15AQ9UKN7 3530 aa4.23□□□□□ -1.73
LINC00649-203ENST00000427447 CELSR1Q9NYQ6 3014 aa4.23□□□□□ -1.73
LINC00649-203ENST00000427447 Q5VSD8 79 aa4.22□□□□□ -1.73
LINC00649-203ENST00000427447 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
LINC00649-203ENST00000427447 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
LINC00649-203ENST00000427447 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
LINC00649-203ENST00000427447 SZT2Q5T011 3432 aa4.19□□□□□ -1.74
LINC00649-203ENST00000427447 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
LINC00649-203ENST00000427447 FBN2P35556 2912 aa4.18□□□□□ -1.74
LINC00649-203ENST00000427447 Q6ZRN7 208 aaPredicted RBP4.17□□□□□ -1.74
LINC00649-203ENST00000427447 VWFP04275 2813 aa4.17□□□□□ -1.74
LINC00649-203ENST00000427447 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
LINC00649-203ENST00000427447 EYSQ5T1H1 3165 aa4.17□□□□□ -1.74
LINC00649-203ENST00000427447 TGP01266 2768 aa4.15□□□□□ -1.75
LINC00649-203ENST00000427447 TENM4Q6N022 2769 aa4.14□□□□□ -1.75
LINC00649-203ENST00000427447 DMDP11532 3685 aa4.14□□□□□ -1.75
LINC00649-203ENST00000427447 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
LINC00649-203ENST00000427447 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
LINC00649-203ENST00000427447 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
LINC00649-203ENST00000427447 KRTAP10-1P60331 282 aa4.09□□□□□ -1.76
LINC00649-203ENST00000427447 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
LINC00649-203ENST00000427447 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
LINC00649-203ENST00000427447 HRNRQ86YZ3 2850 aaPredicted RBP4.07□□□□□ -1.76
LINC00649-203ENST00000427447 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
LINC00649-203ENST00000427447 KRTAP10-2P60368 255 aa4.06□□□□□ -1.76
LINC00649-203ENST00000427447 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
LINC00649-203ENST00000427447 MXRA5Q9NR99 2828 aa4.05□□□□□ -1.76
LINC00649-203ENST00000427447 ZFHX4Q86UP3 3567 aa4.04□□□□□ -1.76
LINC00649-203ENST00000427447 ASPMQ8IZT6 3477 aa4.04□□□□□ -1.76
LINC00649-203ENST00000427447 LAMA5O15230 3695 aa4.03□□□□□ -1.76
LINC00649-203ENST00000427447 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
LINC00649-203ENST00000427447 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
LINC00649-203ENST00000427447 VPS13CQ709C8 3753 aa4.01□□□□□ -1.77
LINC00649-203ENST00000427447 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
LINC00649-203ENST00000427447 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
LINC00649-203ENST00000427447 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
LINC00649-203ENST00000427447 LOC400499M0QZD8 3231 aa3.97□□□□□ -1.77
LINC00649-203ENST00000427447 SMG1Q96Q15 3661 aaKnown RBP3.96□□□□□ -1.77
LINC00649-203ENST00000427447 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
LINC00649-203ENST00000427447 RELNP78509 3460 aa3.9□□□□□ -1.78
LINC00649-203ENST00000427447 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
LINC00649-203ENST00000427447 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
LINC00649-203ENST00000427447 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
LINC00649-203ENST00000427447 KRTAP7-1Q8IUC3 87 aa3.83□□□□□ -1.8
LINC00649-203ENST00000427447 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
LINC00649-203ENST00000427447 MT3P25713 68 aa3.82□□□□□ -1.8
LINC00649-203ENST00000427447 XP32Q5T750 250 aa3.82□□□□□ -1.8
LINC00649-203ENST00000427447 DCHS1Q96JQ0 3298 aa3.82□□□□□ -1.8
LINC00649-203ENST00000427447 CSMD1Q96PZ7 3565 aa3.81□□□□□ -1.8
LINC00649-203ENST00000427447 FBN1P35555 2871 aaKnown RBP3.8□□□□□ -1.8
LINC00649-203ENST00000427447 MUC3AQ02505 3323 aa3.76□□□□□ -1.81
LINC00649-203ENST00000427447 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
LINC00649-203ENST00000427447 BSNQ9UPA5 3926 aa3.72□□□□□ -1.81
LINC00649-203ENST00000427447 CUBNO60494 3623 aa3.72□□□□□ -1.81
LINC00649-203ENST00000427447 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.81
LINC00649-203ENST00000427447 FBN3Q75N90 2809 aa3.71□□□□□ -1.81
LINC00649-203ENST00000427447 KRTAP21-3Q3LHN1 58 aa3.71□□□□□ -1.82
LINC00649-203ENST00000427447 LYSTQ99698 3801 aa3.71□□□□□ -1.82
LINC00649-203ENST00000427447 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
LINC00649-203ENST00000427447 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
LINC00649-203ENST00000427447 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
LINC00649-203ENST00000427447 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
LINC00649-203ENST00000427447 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
LINC00649-203ENST00000427447 SVEP1Q4LDE5 3571 aa3.64□□□□□ -1.83
LINC00649-203ENST00000427447 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
LINC00649-203ENST00000427447 ANK2Q01484 3957 aa3.6□□□□□ -1.83
LINC00649-203ENST00000427447 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
LINC00649-203ENST00000427447 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
LINC00649-203ENST00000427447 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
LINC00649-203ENST00000427447 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
LINC00649-203ENST00000427447 KRTAP3-3Q9BYR6 98 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms